RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W MGA2P40578 1113 aa5.43□□□□□ -1.54
MSH1YHR120W YGR237CP50089 785 aa5.43□□□□□ -1.54
MSH1YHR120W RCR2Q03446 210 aaKnown RBP5.43□□□□□ -1.54
MSH1YHR120W VAC14Q06708 880 aa5.43□□□□□ -1.54
MSH1YHR120W OM45P16547 393 aa5.42□□□□□ -1.54
MSH1YHR120W CYS3P31373 394 aaKnown RBP5.42□□□□□ -1.54
MSH1YHR120W YEL023CP39992 682 aa5.42□□□□□ -1.54
MSH1YHR120W SEC9P40357 651 aa5.42□□□□□ -1.54
MSH1YHR120W FYV8P46949 817 aaKnown RBP5.42□□□□□ -1.54
MSH1YHR120W STB4P50104 949 aa5.42□□□□□ -1.54
MSH1YHR120W TIM8P57744 87 aa5.42□□□□□ -1.54
MSH1YHR120W SNU56Q03782 492 aaKnown RBP5.42□□□□□ -1.54
MSH1YHR120W SPP382Q06411 708 aaPredicted RBP5.42□□□□□ -1.54
MSH1YHR120W NOP6Q07623 225 aaKnown RBP5.42□□□□□ -1.54
MSH1YHR120W MLH2Q07980 695 aa5.42□□□□□ -1.54
MSH1YHR120W ATG9Q12142 997 aa5.42□□□□□ -1.54
MSH1YHR120W CIT2P08679 460 aa5.42□□□□□ -1.54
MSH1YHR120W ASP3-2P0CX77 362 aa5.42□□□□□ -1.54
MSH1YHR120W ASP3-3P0CX78 362 aa5.42□□□□□ -1.54
MSH1YHR120W ASP3-4P0CX79 362 aa5.42□□□□□ -1.54
MSH1YHR120W ASP3-1P0CZ17 362 aa5.42□□□□□ -1.54
MSH1YHR120W MAK16P10962 306 aaPredicted RBP5.42□□□□□ -1.54
MSH1YHR120W PSO2P30620 661 aa5.42□□□□□ -1.54
MSH1YHR120W HXT1P32465 570 aa5.42□□□□□ -1.54
MSH1YHR120W REI1P38344 393 aaPredicted RBP5.42□□□□□ -1.54
MSH1YHR120W APM2P38700 605 aa5.42□□□□□ -1.54
MSH1YHR120W MIP6P38760 659 aaKnown RBP5.42□□□□□ -1.54
MSH1YHR120W RTT107P38850 1070 aa5.42□□□□□ -1.54
MSH1YHR120W OYE3P41816 400 aaPredicted RBP5.42□□□□□ -1.54
MSH1YHR120W CTK3P46963 296 aaPredicted RBP5.42□□□□□ -1.54
MSH1YHR120W EBS1Q03466 884 aaKnown RBP5.42□□□□□ -1.54
MSH1YHR120W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
MSH1YHR120W DAP1Q12091 152 aa5.42□□□□□ -1.54
MSH1YHR120W HAP2P06774 265 aa5.41□□□□□ -1.54
MSH1YHR120W SSB1P11484 613 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W CHS2P14180 963 aa5.41□□□□□ -1.54
MSH1YHR120W MSH3P25336 1018 aa5.41□□□□□ -1.54
MSH1YHR120W SEC65P29478 273 aa5.41□□□□□ -1.54
MSH1YHR120W PIN4P34217 668 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
MSH1YHR120W BYE1P36106 594 aa5.41□□□□□ -1.54
MSH1YHR120W PTC4P38089 393 aa5.41□□□□□ -1.54
MSH1YHR120W YHR054CP38780 354 aa5.41□□□□□ -1.54
MSH1YHR120W SSB2P40150 613 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W YIR016WP40572 265 aa5.41□□□□□ -1.54
MSH1YHR120W HFM1P51979 1187 aa5.41□□□□□ -1.54
MSH1YHR120W RRB1Q04225 511 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W MRI1Q06489 411 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W ATG23Q06671 453 aa5.41□□□□□ -1.54
MSH1YHR120W RLP24Q07915 199 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W RMP1Q12530 201 aa5.41□□□□□ -1.54
MSH1YHR120W CTF3Q12748 733 aa5.41□□□□□ -1.54
MSH1YHR120W CDC37P06101 506 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W CKI1P20485 582 aa5.41□□□□□ -1.54
MSH1YHR120W CNS1P33313 385 aa5.41□□□□□ -1.54
MSH1YHR120W VFA1P40080 203 aa5.41□□□□□ -1.54
MSH1YHR120W MMF1P40185 145 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W SHQ1P40486 507 aaPredicted RBP5.41□□□□□ -1.54
MSH1YHR120W SPC98P53540 846 aa5.41□□□□□ -1.54
MSH1YHR120W NUR1Q12066 484 aa5.41□□□□□ -1.54
MSH1YHR120W SGT2Q12118 346 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W PEX2P32800 271 aa5.41□□□□□ -1.54
MSH1YHR120W HMT1P38074 348 aa5.41□□□□□ -1.54
MSH1YHR120W TDA3P38758 523 aa5.41□□□□□ -1.54
MSH1YHR120W PIG1Q06216 648 aa5.41□□□□□ -1.54
MSH1YHR120W CDD1Q06549 142 aa5.41□□□□□ -1.54
MSH1YHR120W SDH5Q08230 162 aa5.41□□□□□ -1.54
MSH1YHR120W FAL1Q12099 399 aaKnown RBP5.41□□□□□ -1.54
MSH1YHR120W REC8Q12188 680 aa5.41□□□□□ -1.54
MSH1YHR120W LAA1P39526 2014 aa5.4□□□□□ -1.54
MSH1YHR120W NAT1P12945 854 aaKnown RBP5.4□□□□□ -1.54
MSH1YHR120W CLB1P24868 471 aa5.4□□□□□ -1.54
MSH1YHR120W FTR1P40088 404 aa5.4□□□□□ -1.54
MSH1YHR120W ATG3P40344 310 aa5.4□□□□□ -1.54
MSH1YHR120W DAS1P47005 663 aa5.4□□□□□ -1.54
MSH1YHR120W STP1Q00947 519 aa5.4□□□□□ -1.54
MSH1YHR120W UTP5Q04177 643 aaKnown RBP5.4□□□□□ -1.54
MSH1YHR120W GYL1Q04322 720 aa5.4□□□□□ -1.54
MSH1YHR120W POB3Q04636 552 aaKnown RBP5.4□□□□□ -1.54
MSH1YHR120W PLP2Q12017 286 aa5.4□□□□□ -1.54
MSH1YHR120W RPS6AP0CX37 236 aaKnown RBP5.4□□□□□ -1.55
MSH1YHR120W RPS6BP0CX38 236 aaPredicted RBP5.4□□□□□ -1.55
MSH1YHR120W RAD57P25301 460 aa5.4□□□□□ -1.55
MSH1YHR120W MAF1P41910 395 aa5.4□□□□□ -1.55
MSH1YHR120W YGL140CP53120 1219 aa5.4□□□□□ -1.55
MSH1YHR120W NGL3Q03210 505 aa5.4□□□□□ -1.55
MSH1YHR120W YAP7Q08182 245 aa5.4□□□□□ -1.55
MSH1YHR120W SLX4Q12098 748 aa5.4□□□□□ -1.55
MSH1YHR120W GAL80P04387 435 aa5.39□□□□□ -1.55
MSH1YHR120W SRB4P32569 687 aa5.39□□□□□ -1.55
MSH1YHR120W NUT1P53114 1132 aa5.39□□□□□ -1.55
MSH1YHR120W YML083CQ04526 418 aa5.39□□□□□ -1.55
MSH1YHR120W MNL2Q12205 849 aa5.39□□□□□ -1.55
MSH1YHR120W YBL029C-AQ3E756 94 aa5.39□□□□□ -1.55
MSH1YHR120W ATP1P07251 545 aaKnown RBP5.39□□□□□ -1.55
MSH1YHR120W MTF2P10849 440 aa5.39□□□□□ -1.55
MSH1YHR120W IME1P21190 360 aa5.39□□□□□ -1.55
MSH1YHR120W YBR284WP38150 797 aa5.39□□□□□ -1.55
MSH1YHR120W SAF1P38352 637 aa5.39□□□□□ -1.55
MSH1YHR120W SIP5P40210 489 aaKnown RBP5.39□□□□□ -1.55
MSH1YHR120W FIG4P42837 879 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms