RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIC1	YHR052W	SRP40	P32583	406 aa	Predicted RBP	4.19	□□□□□ -1.74
CIC1	YHR052W	TIM23	P32897	222 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	YIR042C	P40586	236 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	ALY2	P47029	1046 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	AMA1	P50082	593 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	ARO10	Q06408	635 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	IRC13	Q08630	104 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	TGL5	Q12043	749 aa		4.19	□□□□□ -1.74
CIC1	YHR052W	YKL091C	P33324	310 aa	Known RBP	4.18	□□□□□ -1.74
CIC1	YHR052W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
CIC1	YHR052W	MTR3	P48240	250 aa	Predicted RBP	4.18	□□□□□ -1.74
CIC1	YHR052W	HSV2	P50079	448 aa	Predicted RBP	4.18	□□□□□ -1.74
CIC1	YHR052W	LAT1	P12695	482 aa	Known RBP	4.17	□□□□□ -1.74
CIC1	YHR052W	MTC2	P34246	357 aa		4.17	□□□□□ -1.74
CIC1	YHR052W	ADY2	P25613	283 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	MCD4	P36051	919 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	YBR259W	P38338	688 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	ECM1	P39715	212 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	YIL166C	P40445	542 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	HOS4	P40480	1083 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	BUD6	P41697	788 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	RIA1	P53893	1110 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	ATG11	Q12527	1178 aa		4.16	□□□□□ -1.74
CIC1	YHR052W	TMT1	P32643	299 aa		4.15	□□□□□ -1.75
CIC1	YHR052W	CBR1	P38626	284 aa	Known RBP	4.15	□□□□□ -1.75
CIC1	YHR052W	BCD1	P38772	366 aa		4.15	□□□□□ -1.75
CIC1	YHR052W	TEX1	P53851	422 aa	Known RBP	4.15	□□□□□ -1.75
CIC1	YHR052W	MDM12	Q92328	271 aa		4.15	□□□□□ -1.75
CIC1	YHR052W	MEF1	P25039	761 aa		4.14	□□□□□ -1.75
CIC1	YHR052W	ILV6	P25605	309 aa	Known RBP	4.14	□□□□□ -1.75
CIC1	YHR052W	HIS7	P33734	552 aa	Known RBP	4.14	□□□□□ -1.75
CIC1	YHR052W	FMP52	P40008	231 aa		4.14	□□□□□ -1.75
CIC1	YHR052W	NUP82	P40368	713 aa		4.14	□□□□□ -1.75
CIC1	YHR052W	GAD1	Q04792	585 aa		4.14	□□□□□ -1.75
CIC1	YHR052W	YLR149C	Q99296	730 aa		4.14	□□□□□ -1.75
CIC1	YHR052W	CDC9	P04819	755 aa		4.13	□□□□□ -1.75
CIC1	YHR052W	STO1	P34160	861 aa	Known RBP	4.13	□□□□□ -1.75
CIC1	YHR052W	BAP3	P41815	604 aa		4.13	□□□□□ -1.75
CIC1	YHR052W	BNA2	P47125	453 aa		4.13	□□□□□ -1.75
CIC1	YHR052W	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
CIC1	YHR052W	SGO1	Q08490	590 aa		4.13	□□□□□ -1.75
CIC1	YHR052W	YLR125W	Q12138	136 aa		4.13	□□□□□ -1.75
CIC1	YHR052W	YFL052W	P43551	465 aa		4.12	□□□□□ -1.75
CIC1	YHR052W	UBC11	P52492	156 aa		4.12	□□□□□ -1.75
CIC1	YHR052W	TEL2	P53038	688 aa		4.12	□□□□□ -1.75
CIC1	YHR052W	YBP2	P53169	641 aa		4.12	□□□□□ -1.75
CIC1	YHR052W	SNP1	Q00916	300 aa	Predicted RBP	4.12	□□□□□ -1.75
CIC1	YHR052W	PHO8	P11491	566 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	ADE2	P21264	571 aa	Known RBP	4.11	□□□□□ -1.75
CIC1	YHR052W	GSY1	P23337	708 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	MIH1	P23748	554 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	APL2	P36000	726 aa	Predicted RBP	4.11	□□□□□ -1.75
CIC1	YHR052W	RPN10	P38886	268 aa	Known RBP	4.11	□□□□□ -1.75
CIC1	YHR052W	CAF16	P43569	289 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	GLO1	P50107	326 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	SSL2	Q00578	843 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	Q0142	Q9ZZW4	58 aa		4.11	□□□□□ -1.75
CIC1	YHR052W	VBA3	P25594	458 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	HIR1	P32479	840 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
CIC1	YHR052W	DSS1	P39112	969 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	NPY1	P53164	384 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	ARG5,6	Q01217	863 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	MCM21	Q06675	368 aa		4.1	□□□□□ -1.75
CIC1	YHR052W	SIR3	P06701	978 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	SRD1	P09007	221 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	DMC1	P25453	334 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	MSH2	P25847	964 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	EMP70	P32802	667 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	YKR051W	P36142	418 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	MIP6	P38760	659 aa	Known RBP	4.09	□□□□□ -1.75
CIC1	YHR052W	LYS9	P38999	446 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	YJL206C	P39529	758 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	MTL1	P53214	551 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	ORC4	P54791	529 aa		4.09	□□□□□ -1.75
CIC1	YHR052W	SPO11	P23179	398 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	HOG1	P32485	435 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	APT2	P36973	181 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	HSL7	P38274	827 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	FMO1	P38866	432 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	CCT7	P42943	550 aa	Known RBP	4.08	□□□□□ -1.76
CIC1	YHR052W	YAP1802	P53309	568 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	SMX3	P54999	86 aa	Predicted RBP	4.08	□□□□□ -1.76
CIC1	YHR052W	SEC5	P89102	971 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	CTK1	Q03957	528 aa	Known RBP	4.08	□□□□□ -1.76
CIC1	YHR052W	HMO1	Q03973	246 aa	Known RBP	4.08	□□□□□ -1.76
CIC1	YHR052W	NHX1	Q04121	633 aa		4.08	□□□□□ -1.76
CIC1	YHR052W	RPN7	Q06103	429 aa	Known RBP	4.08	□□□□□ -1.76
CIC1	YHR052W	HRP1	Q99383	534 aa	Known RBP	4.08	□□□□□ -1.76
CIC1	YHR052W	CIT2	P08679	460 aa		4.07	□□□□□ -1.76
CIC1	YHR052W	THI4	P32318	326 aa		4.07	□□□□□ -1.76
CIC1	YHR052W	YKR018C	P36114	725 aa		4.07	□□□□□ -1.76
CIC1	YHR052W	TRZ1	P36159	838 aa	Predicted RBP	4.07	□□□□□ -1.76
CIC1	YHR052W	REV7	P38927	245 aa		4.07	□□□□□ -1.76
CIC1	YHR052W	PAN2	P53010	1115 aa	Predicted RBP	4.07	□□□□□ -1.76
CIC1	YHR052W	PCL10	P53124	433 aa		4.07	□□□□□ -1.76
CIC1	YHR052W	APM1	Q00776	475 aa	Predicted RBP	4.07	□□□□□ -1.76
CIC1	YHR052W	UGO1	Q03327	502 aa		4.07	□□□□□ -1.76
CIC1	YHR052W	MRI1	Q06489	411 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms