RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	YLR456W	Q06199	204 aa		4.89	□□□□□ -1.63
PXR1	YGR280C	DSE3	Q08729	430 aa		4.89	□□□□□ -1.63
PXR1	YGR280C	FLC1	Q08967	793 aa		4.89	□□□□□ -1.63
PXR1	YGR280C	PNS1	Q12412	539 aa		4.89	□□□□□ -1.63
PXR1	YGR280C	APM4	Q99186	491 aa		4.89	□□□□□ -1.63
PXR1	YGR280C	HFA1	P32874	2273 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	YBR056W-A	I2HB52	66 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	PPH22	P23595	377 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	ATG19	P35193	415 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
PXR1	YGR280C	ALG2	P43636	503 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	IML2	P47031	731 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	STB4	P50104	949 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	ALG11	P53954	548 aa	Known RBP	4.88	□□□□□ -1.63
PXR1	YGR280C	CWC21	Q03375	135 aa	Known RBP	4.88	□□□□□ -1.63
PXR1	YGR280C	YIL046W-A	Q3E7Z4	54 aa		4.88	□□□□□ -1.63
PXR1	YGR280C	SKG6	P32900	734 aa	Predicted RBP	4.87	□□□□□ -1.63
PXR1	YGR280C	PGM1	P33401	570 aa	Known RBP	4.87	□□□□□ -1.63
PXR1	YGR280C	BTT1	P40314	149 aa	Predicted RBP	4.87	□□□□□ -1.63
PXR1	YGR280C	YNR065C	P53751	1116 aa		4.87	□□□□□ -1.63
PXR1	YGR280C	YCG1	Q06680	1035 aa		4.87	□□□□□ -1.63
PXR1	YGR280C	NOC3	Q07896	663 aa	Predicted RBP	4.87	□□□□□ -1.63
PXR1	YGR280C	YPQ1	Q12010	308 aa		4.87	□□□□□ -1.63
PXR1	YGR280C	POL2	P21951	2222 aa	Known RBP	4.87	□□□□□ -1.63
PXR1	YGR280C	COX4	P04037	155 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	RAD3	P06839	778 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	RIP1	P08067	215 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	MTF1	P14908	341 aa	Known RBP	4.86	□□□□□ -1.63
PXR1	YGR280C	PFK1	P16861	987 aa	Known RBP	4.86	□□□□□ -1.63
PXR1	YGR280C	PDC6	P26263	563 aa	Known RBP	4.86	□□□□□ -1.63
PXR1	YGR280C	ECM21	P38167	1117 aa	Known RBP	4.86	□□□□□ -1.63
PXR1	YGR280C	PCA1	P38360	1216 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	YER186C	P40101	306 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	LTP1	P40347	161 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	YJR061W	P40355	935 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	VPS25	P47142	202 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	SUR7	P54003	302 aa		4.86	□□□□□ -1.63
PXR1	YGR280C	IPP1	P00817	287 aa	Known RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	HCA4	P20448	770 aa	Known RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	OPI1	P21957	404 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	PMI40	P29952	429 aa	Known RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	CCR4	P31384	837 aa	Known RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	YBR284W	P38150	797 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	TIF5	P38431	405 aa	Known RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	YIR007W	P40566	764 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	GPD2	P41911	440 aa	Known RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	ROM1	P53046	1155 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	MNP1	P53163	194 aa	Predicted RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	NRM1	P53718	249 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	SEC5	P89102	971 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	HER2	Q03557	464 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	SSF2	Q12153	453 aa	Predicted RBP	4.85	□□□□□ -1.63
PXR1	YGR280C	HRT3	Q12347	344 aa		4.85	□□□□□ -1.63
PXR1	YGR280C	ILV1	P00927	576 aa	Known RBP	4.84	□□□□□ -1.63
PXR1	YGR280C	FPR1	P20081	114 aa	Known RBP	4.84	□□□□□ -1.63
PXR1	YGR280C	SUI2	P20459	304 aa	Known RBP	4.84	□□□□□ -1.63
PXR1	YGR280C	BRF1	P29056	596 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	MRX3	P38172	270 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	VID24	P38263	362 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	ERV46	P39727	415 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	OSW5	P40219	148 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	MNN10	P50108	393 aa	Known RBP	4.84	□□□□□ -1.63
PXR1	YGR280C	KXD1	P53158	218 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	ROD1	Q02805	837 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	SEG1	Q04279	960 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	SPN1	Q06505	410 aa	Predicted RBP	4.84	□□□□□ -1.63
PXR1	YGR280C	OSW2	Q12202	724 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	ZPS1	Q12512	249 aa		4.84	□□□□□ -1.63
PXR1	YGR280C	GAL4	P04386	881 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	GAL80	P04387	435 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	SUP45	P12385	437 aa	Known RBP	4.83	□□□□□ -1.64
PXR1	YGR280C	CLN3	P13365	580 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	KIN3	P22209	435 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	VPS3	P23643	1011 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	ERG6	P25087	383 aa	Known RBP	4.83	□□□□□ -1.64
PXR1	YGR280C	RAD16	P31244	790 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	CYS3	P31373	394 aa	Known RBP	4.83	□□□□□ -1.64
PXR1	YGR280C	DPH2	P32461	534 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	ISF1	P32488	338 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	UBP5	P39944	805 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	TIF34	P40217	347 aa	Known RBP	4.83	□□□□□ -1.64
PXR1	YGR280C	ASG1	P40467	964 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	FYV8	P46949	817 aa	Known RBP	4.83	□□□□□ -1.64
PXR1	YGR280C	CLU1	Q03690	1277 aa	Known RBP	4.83	□□□□□ -1.64
PXR1	YGR280C	TFC6	Q06339	672 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	ALR1	Q08269	859 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	YOR111W	Q99210	232 aa		4.83	□□□□□ -1.64
PXR1	YGR280C	MSF1	P08425	469 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	PRP22	P24384	1145 aa	Known RBP	4.82	□□□□□ -1.64
PXR1	YGR280C	RML2	P32611	393 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	RER2	P35196	286 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	MIA40	P36046	403 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	NMD2	P38798	1089 aa	Known RBP	4.82	□□□□□ -1.64
PXR1	YGR280C	FIS1	P40515	155 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	ERG10	P41338	398 aa	Known RBP	4.82	□□□□□ -1.64
PXR1	YGR280C	RPA14	P50106	137 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	DIP5	P53388	608 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	RIP-Chip
PXR1	YGR280C	AIM33	Q04516	312 aa		4.82	□□□□□ -1.64
PXR1	YGR280C	BSP1	Q06604	576 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms