RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C MRPS35P53292 345 aa5.91□□□□□ -1.46
SCL1YGL011C LEE1Q02799 301 aaKnown RBP5.91□□□□□ -1.46
SCL1YGL011C YTM1Q12024 460 aaPredicted RBP5.91□□□□□ -1.46
SCL1YGL011C SIC1P38634 284 aa5.9□□□□□ -1.46
SCL1YGL011C GZF3P42944 551 aaKnown RBP5.9□□□□□ -1.46
SCL1YGL011C CLU1Q03690 1277 aaKnown RBP5.9□□□□□ -1.46
SCL1YGL011C TOM20P35180 183 aa5.89□□□□□ -1.47
SCL1YGL011C CTF13P35203 478 aa5.89□□□□□ -1.47
SCL1YGL011C PAF1P38351 445 aa5.89□□□□□ -1.47
SCL1YGL011C RPP1P38786 293 aa5.89□□□□□ -1.47
SCL1YGL011C MNN10P50108 393 aaKnown RBP5.89□□□□□ -1.47
SCL1YGL011C BRE5P53741 515 aaKnown RBP5.89□□□□□ -1.47
SCL1YGL011C FOL1P53848 824 aa5.89□□□□□ -1.47
SCL1YGL011C ORC4P54791 529 aa5.89□□□□□ -1.47
SCL1YGL011C ECM9Q02202 377 aa5.89□□□□□ -1.47
SCL1YGL011C TRM11Q12463 433 aa5.89□□□□□ -1.47
SCL1YGL011C EUG1P32474 517 aa5.88□□□□□ -1.47
SCL1YGL011C NGG1P32494 702 aa5.88□□□□□ -1.47
SCL1YGL011C CCT5P40413 562 aaKnown RBP5.88□□□□□ -1.47
SCL1YGL011C YJR039WP47107 1121 aa5.88□□□□□ -1.47
SCL1YGL011C SSZ1P38788 538 aaKnown RBP5.87□□□□□ -1.47
SCL1YGL011C MPT5P39016 859 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SCL1YGL011C MNN11P46985 422 aaKnown RBP5.87□□□□□ -1.47
SCL1YGL011C PRP31P49704 494 aaPredicted RBP5.87□□□□□ -1.47
SCL1YGL011C ERG5P54781 538 aa5.87□□□□□ -1.47
SCL1YGL011C NRG1Q03125 231 aa5.87□□□□□ -1.47
SCL1YGL011C ENB1Q08299 606 aa5.87□□□□□ -1.47
SCL1YGL011C RPS21BQ3E754 87 aaKnown RBP5.87□□□□□ -1.47
SCL1YGL011C ADE2P21264 571 aaKnown RBP5.86□□□□□ -1.47
SCL1YGL011C MRC1P25588 1096 aa5.86□□□□□ -1.47
SCL1YGL011C CTS1P29029 562 aa5.86□□□□□ -1.47
SCL1YGL011C DAL3P32459 195 aa5.86□□□□□ -1.47
SCL1YGL011C HXT6P39003 570 aaKnown RBP5.86□□□□□ -1.47
SCL1YGL011C HXT7P39004 570 aa5.86□□□□□ -1.47
SCL1YGL011C UBP5P39944 805 aa5.86□□□□□ -1.47
SCL1YGL011C NUG1P40010 520 aaKnown RBP5.86□□□□□ -1.47
SCL1YGL011C FKH2P41813 862 aa5.86□□□□□ -1.47
SCL1YGL011C YBP2P53169 641 aa5.86□□□□□ -1.47
SCL1YGL011C RPS21AP0C0V8 87 aaKnown RBP5.85□□□□□ -1.47
SCL1YGL011C PFK1P16861 987 aaKnown RBP5.85□□□□□ -1.47
SCL1YGL011C DCG1P32460 244 aa5.85□□□□□ -1.47
SCL1YGL011C YBR071WP38243 211 aa5.85□□□□□ -1.47
SCL1YGL011C BUL1P48524 976 aa5.85□□□□□ -1.47
SCL1YGL011C COG6P53959 839 aa5.85□□□□□ -1.47
SCL1YGL011C TRE2Q08693 809 aa5.85□□□□□ -1.47
SCL1YGL011C TGL5Q12043 749 aa5.85□□□□□ -1.47
SCL1YGL011C MAL31P38156 614 aa5.84□□□□□ -1.47
SCL1YGL011C ENP1P38333 483 aaKnown RBP5.84□□□□□ -1.47
SCL1YGL011C YBR259WP38338 688 aa5.84□□□□□ -1.47
SCL1YGL011C SET2P46995 733 aaKnown RBP5.84□□□□□ -1.47
SCL1YGL011C PHO23P50947 330 aa5.84□□□□□ -1.47
SCL1YGL011C YHM2Q04013 314 aa5.84□□□□□ -1.47
SCL1YGL011C PMA1P05030 918 aaKnown RBP5.83□□□□□ -1.48
SCL1YGL011C OAF3P36023 863 aa5.83□□□□□ -1.48
SCL1YGL011C DID4P36108 232 aa5.83□□□□□ -1.48
SCL1YGL011C AKL1P38080 1108 aaKnown RBP5.83□□□□□ -1.48
SCL1YGL011C APN2P38207 520 aa5.83□□□□□ -1.48
SCL1YGL011C YHR202WP38887 602 aa5.83□□□□□ -1.48
SCL1YGL011C BEM4P39011 633 aa5.83□□□□□ -1.48
SCL1YGL011C ARG5,6Q01217 863 aa5.83□□□□□ -1.48
SCL1YGL011C APL2P36000 726 aaPredicted RBP5.82□□□□□ -1.48
SCL1YGL011C YKR075CP36155 307 aa5.82□□□□□ -1.48
SCL1YGL011C SHM2P37291 469 aaKnown RBP5.82□□□□□ -1.48
SCL1YGL011C YHR112CP38716 378 aa5.82□□□□□ -1.48
SCL1YGL011C GID8P40208 455 aa5.82□□□□□ -1.48
SCL1YGL011C IRC24P40580 263 aa5.82□□□□□ -1.48
SCL1YGL011C DUG1P43616 481 aaKnown RBP5.82□□□□□ -1.48
SCL1YGL011C BFA1P47113 574 aa5.82□□□□□ -1.48
SCL1YGL011C TEX1P53851 422 aaKnown RBP5.82□□□□□ -1.48
SCL1YGL011C GPD1Q00055 391 aaKnown RBP5.82□□□□□ -1.48
SCL1YGL011C HFI1Q12060 488 aa5.82□□□□□ -1.48
SCL1YGL011C TRM13Q12383 476 aa5.82□□□□□ -1.48
SCL1YGL011C TRP4P07285 380 aaPredicted RBP5.81□□□□□ -1.48
SCL1YGL011C SWI6P09959 803 aa5.81□□□□□ -1.48
SCL1YGL011C PYC1P11154 1178 aaKnown RBP5.81□□□□□ -1.48
SCL1YGL011C HCM1P25364 564 aa5.81□□□□□ -1.48
SCL1YGL011C SEC65P29478 273 aa5.81□□□□□ -1.48
SCL1YGL011C FAT1P38225 669 aa5.81□□□□□ -1.48
SCL1YGL011C ECM1P39715 212 aa5.81□□□□□ -1.48
SCL1YGL011C GPP2P40106 250 aaKnown RBP5.81□□□□□ -1.48
SCL1YGL011C TAF1P46677 1066 aa5.81□□□□□ -1.48
SCL1YGL011C NIT2P47016 307 aa5.81□□□□□ -1.48
SCL1YGL011C YLR407WQ06070 228 aa5.81□□□□□ -1.48
SCL1YGL011C MCM21Q06675 368 aa5.81□□□□□ -1.48
SCL1YGL011C ESC8Q08119 714 aa5.81□□□□□ -1.48
SCL1YGL011C IMG2P25642 146 aaPredicted RBP5.8□□□□□ -1.48
SCL1YGL011C SER1P33330 395 aaKnown RBP5.8□□□□□ -1.48
SCL1YGL011C TFC4P33339 1025 aa5.8□□□□□ -1.48
SCL1YGL011C YNL195CP40168 261 aa5.8□□□□□ -1.48
SCL1YGL011C MUP1P50276 574 aa5.8□□□□□ -1.48
SCL1YGL011C PTA1Q01329 785 aaPredicted RBP5.8□□□□□ -1.48
SCL1YGL011C GAD1Q04792 585 aa5.8□□□□□ -1.48
SCL1YGL011C RMP1Q12530 201 aa5.8□□□□□ -1.48
SCL1YGL011C APM4Q99186 491 aa5.8□□□□□ -1.48
SCL1YGL011C AEP2P22136 580 aa5.79□□□□□ -1.48
SCL1YGL011C ERG6P25087 383 aaKnown RBP5.79□□□□□ -1.48
SCL1YGL011C YKU70P32807 602 aa5.79□□□□□ -1.48
SCL1YGL011C APT2P36973 181 aa5.79□□□□□ -1.48
SCL1YGL011C ELO3P40319 345 aa5.79□□□□□ -1.48
SCL1YGL011C PEX14P53112 341 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms