RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C DYS1P38791 387 aa8.34□□□□□ -1.07
PUP3YER094C KAP123P40069 1113 aaKnown RBP8.34□□□□□ -1.07
PUP3YER094C JJJ1P53863 590 aa8.34□□□□□ -1.07
PUP3YER094C BOP3P53958 396 aa8.34□□□□□ -1.07
PUP3YER094C SYH1Q02875 849 aaKnown RBP8.34□□□□□ -1.07
PUP3YER094C DNL4Q08387 944 aaPredicted RBP8.34□□□□□ -1.07
PUP3YER094C SFI1Q12369 946 aa8.34□□□□□ -1.07
PUP3YER094C RNR1P21524 888 aaKnown RBP8.33□□□□□ -1.08
PUP3YER094C VMA4P22203 233 aaKnown RBP8.33□□□□□ -1.08
PUP3YER094C EFB1P32471 206 aaKnown RBP8.33□□□□□ -1.08
PUP3YER094C PAM1P37304 830 aaKnown RBP8.33□□□□□ -1.08
PUP3YER094C UBX7P38349 436 aa8.33□□□□□ -1.08
PUP3YER094C YAP1801P38856 637 aa8.33□□□□□ -1.08
PUP3YER094C SAH1P39954 449 aaKnown RBP8.33□□□□□ -1.08
PUP3YER094C YER186CP40101 306 aa8.33□□□□□ -1.08
PUP3YER094C YTA12P40341 825 aa8.33□□□□□ -1.08
PUP3YER094C KAP114P53067 1004 aa8.33□□□□□ -1.08
PUP3YER094C YNL115CP53925 644 aa8.33□□□□□ -1.08
PUP3YER094C NGL3Q03210 505 aa8.33□□□□□ -1.08
PUP3YER094C YMR114CQ04471 368 aaKnown RBP8.33□□□□□ -1.08
PUP3YER094C SIL1Q08199 421 aa8.33□□□□□ -1.08
PUP3YER094C RPS3P05750 240 aaKnown RBP8.32□□□□□ -1.08
PUP3YER094C ERG11P10614 530 aa8.32□□□□□ -1.08
PUP3YER094C DPB3P27344 201 aa8.32□□□□□ -1.08
PUP3YER094C YEL043WP32618 956 aa8.32□□□□□ -1.08
PUP3YER094C BLI1P35727 113 aa8.32□□□□□ -1.08
PUP3YER094C HEL1P36113 551 aa8.32□□□□□ -1.08
PUP3YER094C TBS1P38114 1094 aa8.32□□□□□ -1.08
PUP3YER094C SPC72P39723 622 aa8.32□□□□□ -1.08
PUP3YER094C BUD16P39988 312 aa8.32□□□□□ -1.08
PUP3YER094C CEP3P40969 608 aa8.32□□□□□ -1.08
PUP3YER094C ALT1P52893 592 aa8.32□□□□□ -1.08
PUP3YER094C YGR111WP53265 400 aa8.32□□□□□ -1.08
PUP3YER094C BTN2P53286 410 aa8.32□□□□□ -1.08
PUP3YER094C SNU56Q03782 492 aaKnown RBP8.32□□□□□ -1.08
PUP3YER094C ECM30Q06673 1274 aa8.32□□□□□ -1.08
PUP3YER094C YER152CP10356 443 aa8.31□□□□□ -1.08
PUP3YER094C GFA1P14742 717 aaKnown RBP8.31□□□□□ -1.08
PUP3YER094C GYP6P32806 458 aa8.31□□□□□ -1.08
PUP3YER094C CSE2P33308 149 aa8.31□□□□□ -1.08
PUP3YER094C BCH2P36122 765 aa8.31□□□□□ -1.08
PUP3YER094C CBR1P38626 284 aaKnown RBP8.31□□□□□ -1.08
PUP3YER094C HIS2P38635 335 aa8.31□□□□□ -1.08
PUP3YER094C YHL026CP38740 315 aa8.31□□□□□ -1.08
PUP3YER094C SMF1P38925 575 aa8.31□□□□□ -1.08
PUP3YER094C ESL1P40456 1118 aa8.31□□□□□ -1.08
PUP3YER094C PHO86P46956 311 aa8.31□□□□□ -1.08
PUP3YER094C YJR054WP47114 497 aa8.31□□□□□ -1.08
PUP3YER094C YPL034WQ03083 165 aa8.31□□□□□ -1.08
PUP3YER094C CDD1Q06549 142 aa8.31□□□□□ -1.08
PUP3YER094C YOR022CQ12204 715 aa8.31□□□□□ -1.08
PUP3YER094C NOP14Q99207 810 aaKnown RBP8.31□□□□□ -1.08
PUP3YER094C RSA4P25382 515 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C SPT5P27692 1063 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C PAP1P29468 568 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C NCL1P38205 684 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C RCK2P38623 610 aa8.3□□□□□ -1.08
PUP3YER094C TDA3P38758 523 aa8.3□□□□□ -1.08
PUP3YER094C BRL1P38770 471 aa8.3□□□□□ -1.08
PUP3YER094C GEM1P39722 662 aa8.3□□□□□ -1.08
PUP3YER094C STB4P50104 949 aa8.3□□□□□ -1.08
PUP3YER094C CWC22P53333 577 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C NOP13P53883 403 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
PUP3YER094C GPD1Q00055 391 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C FMP30Q02883 468 aa8.3□□□□□ -1.08
PUP3YER094C DIG1Q03063 452 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C RRB1Q04225 511 aaKnown RBP8.3□□□□□ -1.08
PUP3YER094C YPR027CQ12079 277 aa8.3□□□□□ -1.08
PUP3YER094C LDB19Q12502 818 aa8.3□□□□□ -1.08
PUP3YER094C CTF3Q12748 733 aa8.3□□□□□ -1.08
PUP3YER094C VPS13Q07878 3144 aa8.3□□□□□ -1.08
PUP3YER094C STE11P23561 717 aa8.29□□□□□ -1.08
PUP3YER094C BYE1P36106 594 aa8.29□□□□□ -1.08
PUP3YER094C SPO74P45819 413 aa8.29□□□□□ -1.08
PUP3YER094C YMR1P47147 688 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
PUP3YER094C BRO1P48582 844 aa8.29□□□□□ -1.08
PUP3YER094C PRP31P49704 494 aaPredicted RBP8.29□□□□□ -1.08
PUP3YER094C YGR130CP53278 816 aa8.29□□□□□ -1.08
PUP3YER094C MAL13P53338 473 aa8.29□□□□□ -1.08
PUP3YER094C EEB1Q02891 456 aa8.29□□□□□ -1.08
PUP3YER094C POB3Q04636 552 aaKnown RBP8.29□□□□□ -1.08
PUP3YER094C YDR222WQ04925 415 aa8.29□□□□□ -1.08
PUP3YER094C MAG2Q06436 670 aaKnown RBP8.29□□□□□ -1.08
PUP3YER094C ZRT2Q12436 422 aa8.29□□□□□ -1.08
PUP3YER094C CHS1P08004 1131 aa8.28□□□□□ -1.08
PUP3YER094C VPS3P23643 1011 aa8.28□□□□□ -1.08
PUP3YER094C DBF4P32325 704 aa8.28□□□□□ -1.08
PUP3YER094C NOP4P37838 685 aaKnown RBP8.28□□□□□ -1.08
PUP3YER094C AGP2P38090 596 aa8.28□□□□□ -1.08
PUP3YER094C RRT2P38332 387 aa8.28□□□□□ -1.08
PUP3YER094C MAD1P40957 749 aa8.28□□□□□ -1.08
PUP3YER094C ZAP1P47043 880 aa8.28□□□□□ -1.08
PUP3YER094C YGL036WP53185 909 aaPredicted RBP8.28□□□□□ -1.08
PUP3YER094C HOP2P53187 214 aa8.28□□□□□ -1.08
PUP3YER094C MZM1Q03429 123 aaPredicted RBP8.28□□□□□ -1.08
PUP3YER094C RCR2Q03446 210 aaKnown RBP8.28□□□□□ -1.08
PUP3YER094C GYL1Q04322 720 aa8.28□□□□□ -1.08
PUP3YER094C ATG23Q06671 453 aa8.28□□□□□ -1.08
PUP3YER094C NOP58Q12499 511 aaKnown RBP8.28□□□□□ -1.08
PUP3YER094C CIT2P08679 460 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms