RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	PTP2	P29461	750 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	ENA2	Q01896	1091 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	TMA64	Q04600	565 aa	Known RBP	6.6	□□□□□ -1.35
YEF1	YEL041W	PHM6	Q05637	104 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	MCA1	Q08601	432 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	ENA5	Q12691	1091 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	YPR053C	Q6Q5F3	151 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	CCR4	P31384	837 aa	Known RBP	6.6	□□□□□ -1.35
YEF1	YEL041W	YHL012W	P38709	493 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	RIM4	P38741	713 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	RLP7	P40693	322 aa	Known RBP	6.6	□□□□□ -1.35
YEF1	YEL041W	HXT16	P47185	567 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	SPC105	P53148	917 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
YEF1	YEL041W	RRP6	Q12149	733 aa	Known RBP	6.6	□□□□□ -1.35
YEF1	YEL041W	OSW2	Q12202	724 aa		6.6	□□□□□ -1.35
YEF1	YEL041W	SRO9	P25567	434 aa	Known RBP	6.59	□□□□□ -1.36
YEF1	YEL041W	DAL3	P32459	195 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	YKL133C	P36066	463 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	BIT2	P38346	545 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	MMM1	P41800	426 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	ECM9	Q02202	377 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	NBA1	Q08229	501 aa	Known RBP	6.59	□□□□□ -1.36
YEF1	YEL041W	RSB1	Q08417	382 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	YVC1	Q12324	675 aa		6.59	□□□□□ -1.36
YEF1	YEL041W	DIF1	O13577	133 aa		6.58	□□□□□ -1.36
YEF1	YEL041W	MIH1	P23748	554 aa		6.58	□□□□□ -1.36
YEF1	YEL041W	URA1	P28272	314 aa	Predicted RBP	6.58	□□□□□ -1.36
YEF1	YEL041W	MRS6	P32864	603 aa	Known RBP	6.58	□□□□□ -1.36
YEF1	YEL041W	EMP65	P40085	556 aa		6.58	□□□□□ -1.36
YEF1	YEL041W	UBC9	P50623	157 aa	Predicted RBP	6.58	□□□□□ -1.36
YEF1	YEL041W	TAN1	P53072	289 aa	Predicted RBP	6.58	□□□□□ -1.36
YEF1	YEL041W	LRS4	Q04087	347 aa	Known RBP	6.58	□□□□□ -1.36
YEF1	YEL041W	MLC2	Q06580	163 aa		6.58	□□□□□ -1.36
YEF1	YEL041W	PHM7	Q12252	991 aa		6.58	□□□□□ -1.36
YEF1	YEL041W	KCC4	P25389	1037 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	MDL2	P33311	773 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	PTH2	P34222	208 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	SAP190	P36123	1033 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	SKN7	P38889	622 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	SHR5	P41912	237 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	RSC8	P43609	557 aa	Known RBP	6.57	□□□□□ -1.36
YEF1	YEL041W	HFM1	P51979	1187 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	SVS1	Q12254	260 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	YBR182C-A	Q8TGU6	64 aa		6.57	□□□□□ -1.36
YEF1	YEL041W	RPS9A	O13516	197 aa	Known RBP	6.56	□□□□□ -1.36
YEF1	YEL041W	SAM35	P14693	329 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	YCL002C	P25565	263 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	HEM12	P32347	362 aa	Predicted RBP	6.56	□□□□□ -1.36
YEF1	YEL041W	SAF1	P38352	637 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	ICP55	P40051	511 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	SLD3	P53135	668 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	NPY1	P53164	384 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	PAP2	P53632	584 aa	Known RBP	6.56	□□□□□ -1.36
YEF1	YEL041W	SDH1	Q00711	640 aa		6.56	□□□□□ -1.36
YEF1	YEL041W	COX11	P19516	300 aa	Known RBP	6.55	□□□□□ -1.36
YEF1	YEL041W	CYS3	P31373	394 aa	Known RBP	6.55	□□□□□ -1.36
YEF1	YEL041W	PGM1	P33401	570 aa	Known RBP	6.55	□□□□□ -1.36
YEF1	YEL041W	YKL222C	P35995	705 aa		6.55	□□□□□ -1.36
YEF1	YEL041W	SET5	P38890	526 aa	Known RBP	6.55	□□□□□ -1.36
YEF1	YEL041W	CEP3	P40969	608 aa		6.55	□□□□□ -1.36
YEF1	YEL041W	CIT3	P43635	486 aa		6.55	□□□□□ -1.36
YEF1	YEL041W	PTA1	Q01329	785 aa	Predicted RBP	6.55	□□□□□ -1.36
YEF1	YEL041W	SKY1	Q03656	742 aa		6.55	□□□□□ -1.36
YEF1	YEL041W	YPR027C	Q12079	277 aa		6.55	□□□□□ -1.36
YEF1	YEL041W	TY3B-I	Q7LHG5	1498 aa	Known RBP	6.55	□□□□□ -1.36
YEF1	YEL041W	NOT3	P06102	836 aa	Known RBP	6.54	□□□□□ -1.36
YEF1	YEL041W	ESL2	P36168	1195 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	ECM21	P38167	1117 aa	Known RBP	6.54	□□□□□ -1.36
YEF1	YEL041W	YAP1801	P38856	637 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	RRP8	P38961	392 aa	Known RBP	6.54	□□□□□ -1.36
YEF1	YEL041W	YFL052W	P43551	465 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	RCM1	P53972	490 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	VPS30	Q02948	557 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	YPL034W	Q03083	165 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	SVL3	Q03088	825 aa	Known RBP	6.54	□□□□□ -1.36
YEF1	YEL041W	RSC58	Q07979	502 aa		6.54	□□□□□ -1.36
YEF1	YEL041W	COQ2	P32378	372 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	YHM2	Q04013	314 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	CRR1	Q05790	422 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	PEX15	Q08215	383 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	PRC1	P00729	532 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	HXT6	P39003	570 aa	Known RBP	6.53	□□□□□ -1.36
YEF1	YEL041W	HXT7	P39004	570 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	ERP2	P39704	215 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	HDA1	P53973	706 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	RPN7	Q06103	429 aa	Known RBP	6.53	□□□□□ -1.36
YEF1	YEL041W	XYL2	Q07993	356 aa		6.53	□□□□□ -1.36
YEF1	YEL041W	TYE7	P33122	291 aa	Predicted RBP	6.52	□□□□□ -1.37
YEF1	YEL041W	STE13	P33894	931 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	YKR051W	P36142	418 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	HIS6	P40545	261 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	OYE3	P41816	400 aa	Predicted RBP	6.52	□□□□□ -1.37
YEF1	YEL041W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.52	□□□□□ -1.37	not detected
YEF1	YEL041W	YKR011C	Q02209	353 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	PSR2	Q07949	397 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	YOR059C	Q08448	450 aa	Known RBP	6.52	□□□□□ -1.37
YEF1	YEL041W	YPL277C	Q08989	487 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	HFI1	Q12060	488 aa		6.52	□□□□□ -1.37
YEF1	YEL041W	YLR122C	Q12312	125 aa		6.52	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms