RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene VAB2, Length 849 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAB2	YEL005C	ATG33	Q06485	197 aa		4.19	□□□□□ -1.74
VAB2	YEL005C	KCS1	Q12494	1050 aa		4.19	□□□□□ -1.74
VAB2	YEL005C	HMG1	P12683	1054 aa		4.18	□□□□□ -1.74
VAB2	YEL005C	TDA3	P38758	523 aa		4.18	□□□□□ -1.74
VAB2	YEL005C	UBC9	P50623	157 aa	Predicted RBP	4.18	□□□□□ -1.74
VAB2	YEL005C	YDR338C	Q05497	695 aa		4.18	□□□□□ -1.74
VAB2	YEL005C	SSB1	P11484	613 aa	Known RBP	4.17	□□□□□ -1.74
VAB2	YEL005C	YKR051W	P36142	418 aa		4.17	□□□□□ -1.74
VAB2	YEL005C	YKR075C	P36155	307 aa		4.17	□□□□□ -1.74
VAB2	YEL005C	APT2	P36973	181 aa		4.17	□□□□□ -1.74
VAB2	YEL005C	CKB2	P38930	258 aa		4.17	□□□□□ -1.74
VAB2	YEL005C	SSB2	P40150	613 aa	Known RBP	4.17	□□□□□ -1.74
VAB2	YEL005C	SEC21	P32074	935 aa	Known RBP	4.16	□□□□□ -1.74
VAB2	YEL005C	STE14	P32584	239 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	GRX4	P32642	244 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	UBP12	P39538	1254 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	PFA3	P42836	336 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	YGR153W	P48238	217 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	GPD1	Q00055	391 aa	Known RBP	4.16	□□□□□ -1.74
VAB2	YEL005C	MUS81	Q04149	632 aa	Predicted RBP	4.16	□□□□□ -1.74
VAB2	YEL005C	TRM11	Q12463	433 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	Q0142	Q9ZZW4	58 aa		4.16	□□□□□ -1.74
VAB2	YEL005C	PFK1	P16861	987 aa	Known RBP	4.15	□□□□□ -1.75
VAB2	YEL005C	KAR4	P25583	335 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	MAL31	P38156	614 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	RPP1	P38786	293 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	RET2	P43621	546 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	YJR096W	P47137	282 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	PCL10	P53124	433 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	ASI2	P53895	289 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	ENB1	Q08299	606 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	YLR149C	Q99296	730 aa		4.15	□□□□□ -1.75
VAB2	YEL005C	YKR018C	P36114	725 aa		4.14	□□□□□ -1.75
VAB2	YEL005C	NRG1	Q03125	231 aa		4.14	□□□□□ -1.75
VAB2	YEL005C	MTQ2	Q03920	221 aa	Predicted RBP	4.14	□□□□□ -1.75
VAB2	YEL005C	YTM1	Q12024	460 aa	Predicted RBP	4.14	□□□□□ -1.75
VAB2	YEL005C	YLR415C	O13578	112 aa		4.13	□□□□□ -1.75
VAB2	YEL005C	MET3	P08536	511 aa		4.13	□□□□□ -1.75
VAB2	YEL005C	CCR4	P31384	837 aa	Known RBP	4.13	□□□□□ -1.75
VAB2	YEL005C	YBR259W	P38338	688 aa		4.13	□□□□□ -1.75
VAB2	YEL005C	GZF3	P42944	551 aa	Known RBP	4.13	□□□□□ -1.75
VAB2	YEL005C	PRP31	P49704	494 aa	Predicted RBP	4.13	□□□□□ -1.75
VAB2	YEL005C	EXG2	P52911	562 aa		4.13	□□□□□ -1.75
VAB2	YEL005C	AIM39	Q08223	395 aa		4.13	□□□□□ -1.75
VAB2	YEL005C	TRE2	Q08693	809 aa		4.13	□□□□□ -1.75
VAB2	YEL005C	TUB3	P09734	445 aa	Known RBP	4.12	□□□□□ -1.75
VAB2	YEL005C	MIH1	P23748	554 aa		4.12	□□□□□ -1.75
VAB2	YEL005C	CTF13	P35203	478 aa		4.12	□□□□□ -1.75
VAB2	YEL005C	CUE2	P36075	443 aa	Known RBP	4.12	□□□□□ -1.75
VAB2	YEL005C	MIP6	P38760	659 aa	Known RBP	4.12	□□□□□ -1.75
VAB2	YEL005C	GAD1	Q04792	585 aa		4.12	□□□□□ -1.75
VAB2	YEL005C	MNN4	P36044	1178 aa		4.11	□□□□□ -1.75
VAB2	YEL005C	SIC1	P38634	284 aa		4.11	□□□□□ -1.75
VAB2	YEL005C	PTA1	Q01329	785 aa	Predicted RBP	4.11	□□□□□ -1.75
VAB2	YEL005C	DLT1	Q04216	342 aa		4.11	□□□□□ -1.75
VAB2	YEL005C	HRR25	P29295	494 aa	Known RBP	4.1	□□□□□ -1.75
VAB2	YEL005C	TOM20	P35180	183 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	DID4	P36108	232 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	APN2	P38207	520 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	FKH2	P41813	862 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	AMA1	P50082	593 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	COX18	P53239	316 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	REC102	Q02721	264 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	SGO1	Q08490	590 aa		4.1	□□□□□ -1.75
VAB2	YEL005C	TRP4	P07285	380 aa	Predicted RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	MRC1	P25588	1096 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	OAF1	P39720	1047 aa	Predicted RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	GPP1	P41277	250 aa	Known RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	QRI1	P43123	477 aa	Known RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	MNN11	P46985	422 aa	Known RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	GPG1	P53130	126 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	CTK1	Q03957	528 aa	Known RBP	4.09	□□□□□ -1.75
VAB2	YEL005C	YHM2	Q04013	314 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	ASM4	Q05166	528 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	MCM21	Q06675	368 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	TMA17	Q12513	150 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	RMP1	Q12530	201 aa		4.09	□□□□□ -1.75
VAB2	YEL005C	SEC15	P22224	910 aa		4.08	□□□□□ -1.76
VAB2	YEL005C	APL2	P36000	726 aa	Predicted RBP	4.08	□□□□□ -1.76
VAB2	YEL005C	TRZ1	P36159	838 aa	Predicted RBP	4.08	□□□□□ -1.76
VAB2	YEL005C	SSZ1	P38788	538 aa	Known RBP	4.08	□□□□□ -1.76
VAB2	YEL005C	ECM1	P39715	212 aa		4.08	□□□□□ -1.76
VAB2	YEL005C	ELO3	P40319	345 aa		4.08	□□□□□ -1.76
VAB2	YEL005C	SET2	P46995	733 aa	Known RBP	4.08	□□□□□ -1.76
VAB2	YEL005C	YJR039W	P47107	1121 aa		4.08	□□□□□ -1.76
VAB2	YEL005C	YMR210W	Q03649	449 aa		4.08	□□□□□ -1.76
VAB2	YEL005C	PYC1	P11154	1178 aa	Known RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	PRP4	P20053	465 aa	Known RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	ADE2	P21264	571 aa	Known RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	AEP2	P22136	580 aa		4.07	□□□□□ -1.76
VAB2	YEL005C	EFT1	P32324	842 aa	Known RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	YHR202W	P38887	602 aa		4.07	□□□□□ -1.76
VAB2	YEL005C	CCT5	P40413	562 aa	Known RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	ARP4	P80428	489 aa		4.07	□□□□□ -1.76
VAB2	YEL005C	ARG5,6	Q01217	863 aa		4.07	□□□□□ -1.76
VAB2	YEL005C	SLU7	Q02775	382 aa	Known RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	ISA1	Q07821	250 aa	Predicted RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	DIA2	Q08496	732 aa	Predicted RBP	4.07	□□□□□ -1.76
VAB2	YEL005C	DCS2	Q12123	353 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms