RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W ARO10Q06408 635 aa2.45□□□□□ -2.02
LCD1YDR499W SPC29P33419 253 aa2.44□□□□□ -2.02
LCD1YDR499W SFB3P38810 929 aa2.44□□□□□ -2.02
LCD1YDR499W NDC80P40460 691 aa2.44□□□□□ -2.02
LCD1YDR499W HXT16P47185 567 aa2.44□□□□□ -2.02
LCD1YDR499W PRP31P49704 494 aaPredicted RBP2.44□□□□□ -2.02
LCD1YDR499W YBP2P53169 641 aa2.44□□□□□ -2.02
LCD1YDR499W ATP25Q03153 612 aa2.44□□□□□ -2.02
LCD1YDR499W THI7Q05998 598 aa2.44□□□□□ -2.02
LCD1YDR499W ATG11Q12527 1178 aa2.44□□□□□ -2.02
LCD1YDR499W CAN1P04817 590 aa2.44□□□□□ -2.02
LCD1YDR499W SPO11P23179 398 aa2.44□□□□□ -2.02
LCD1YDR499W MVD1P32377 396 aaKnown RBP2.44□□□□□ -2.02
LCD1YDR499W RSP5P39940 809 aaKnown RBP2.44□□□□□ -2.02
LCD1YDR499W BAP3P41815 604 aa2.44□□□□□ -2.02
LCD1YDR499W TY4A-JP47023 414 aa2.44□□□□□ -2.02
LCD1YDR499W PAN2P53010 1115 aaPredicted RBP2.44□□□□□ -2.02
LCD1YDR499W YDR338CQ05497 695 aa2.44□□□□□ -2.02
LCD1YDR499W AFT2Q08957 416 aa2.44□□□□□ -2.02
LCD1YDR499W YNL162W-AQ3E7A8 72 aa2.44□□□□□ -2.02
LCD1YDR499W EMP70P32802 667 aa2.43□□□□□ -2.02
LCD1YDR499W FMO1P38866 432 aa2.43□□□□□ -2.02
LCD1YDR499W CCT3P39077 534 aaKnown RBP2.43□□□□□ -2.02
LCD1YDR499W YAP1802P53309 568 aa2.43□□□□□ -2.02
LCD1YDR499W COQ11Q05892 277 aa2.43□□□□□ -2.02
LCD1YDR499W TAF3Q12297 353 aa2.43□□□□□ -2.02
LCD1YDR499W YKL033W-AQ86ZR7 236 aa2.43□□□□□ -2.02
LCD1YDR499W APM1Q00776 475 aaPredicted RBP2.42□□□□□ -2.02
LCD1YDR499W PYC1P11154 1178 aaKnown RBP2.42□□□□□ -2.02
LCD1YDR499W ADE2P21264 571 aaKnown RBP2.42□□□□□ -2.02
LCD1YDR499W ILV6P25605 309 aaKnown RBP2.42□□□□□ -2.02
LCD1YDR499W YHR112CP38716 378 aa2.42□□□□□ -2.02
LCD1YDR499W HRB1P38922 454 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
LCD1YDR499W LYS9P38999 446 aa2.42□□□□□ -2.02
LCD1YDR499W CTK1Q03957 528 aaKnown RBP2.42□□□□□ -2.02
LCD1YDR499W HOF1Q05080 669 aa2.42□□□□□ -2.02
LCD1YDR499W RGC1Q06108 1083 aaKnown RBP2.42□□□□□ -2.02
LCD1YDR499W SIR3P06701 978 aa2.41□□□□□ -2.02
LCD1YDR499W GAL11P19659 1081 aa2.41□□□□□ -2.02
LCD1YDR499W CTR1P49573 406 aa2.41□□□□□ -2.02
LCD1YDR499W Q0142Q9ZZW4 58 aa2.41□□□□□ -2.02
LCD1YDR499W ERG6P25087 383 aaKnown RBP2.41□□□□□ -2.02
LCD1YDR499W PHO11P35842 467 aa2.41□□□□□ -2.02
LCD1YDR499W GLG1P36143 616 aa2.41□□□□□ -2.02
LCD1YDR499W UBS1P38290 277 aa2.41□□□□□ -2.02
LCD1YDR499W PHO12P38693 467 aa2.41□□□□□ -2.02
LCD1YDR499W NUP60P39705 539 aa2.41□□□□□ -2.02
LCD1YDR499W ECM1P39715 212 aa2.41□□□□□ -2.02
LCD1YDR499W ARG2P40360 574 aa2.41□□□□□ -2.02
LCD1YDR499W YFL052WP43551 465 aa2.41□□□□□ -2.02
LCD1YDR499W ORC4P54791 529 aa2.41□□□□□ -2.02
LCD1YDR499W YLR149CQ99296 730 aa2.41□□□□□ -2.02
LCD1YDR499W YEL020CP39994 560 aa2.4□□□□□ -2.03
LCD1YDR499W CDC53Q12018 815 aaKnown RBP2.4□□□□□ -2.03
LCD1YDR499W MLH3Q12083 715 aa2.4□□□□□ -2.03
LCD1YDR499W HRP1Q99383 534 aaKnown RBP2.4□□□□□ -2.03
LCD1YDR499W APL2P36000 726 aaPredicted RBP2.4□□□□□ -2.03
LCD1YDR499W TRZ1P36159 838 aaPredicted RBP2.4□□□□□ -2.03
LCD1YDR499W BDH2P39713 417 aa2.4□□□□□ -2.03
LCD1YDR499W YJL049WP47048 450 aa2.4□□□□□ -2.03
LCD1YDR499W UBC9P50623 157 aaPredicted RBP2.4□□□□□ -2.03
LCD1YDR499W ARG5,6Q01217 863 aa2.4□□□□□ -2.03
LCD1YDR499W YAP7Q08182 245 aa2.4□□□□□ -2.03
LCD1YDR499W USV1Q12132 391 aa2.4□□□□□ -2.03
LCD1YDR499W APT2P36973 181 aa2.39□□□□□ -2.03
LCD1YDR499W FHN1P53279 174 aa2.39□□□□□ -2.03
LCD1YDR499W CCR4P31384 837 aaKnown RBP2.38□□□□□ -2.03
LCD1YDR499W GDH3P39708 457 aa2.38□□□□□ -2.03
LCD1YDR499W NPY1P53164 384 aa2.38□□□□□ -2.03
LCD1YDR499W ATG4P53867 494 aa2.38□□□□□ -2.03
LCD1YDR499W MRI1Q06489 411 aaKnown RBP2.38□□□□□ -2.03
LCD1YDR499W ZRT2Q12436 422 aa2.38□□□□□ -2.03
LCD1YDR499W RPN13O13563 156 aa2.38□□□□□ -2.03
LCD1YDR499W ERR1P0CX10 437 aa2.38□□□□□ -2.03
LCD1YDR499W ERR2P0CX11 437 aa2.38□□□□□ -2.03
LCD1YDR499W ORC2P32833 620 aa2.38□□□□□ -2.03
LCD1YDR499W MCD4P36051 919 aa2.38□□□□□ -2.03
LCD1YDR499W GET2P40056 285 aa2.38□□□□□ -2.03
LCD1YDR499W BNA2P47125 453 aa2.38□□□□□ -2.03
LCD1YDR499W NOP7P53261 605 aaKnown RBP2.38□□□□□ -2.03
LCD1YDR499W MCM21Q06675 368 aa2.38□□□□□ -2.03
LCD1YDR499W THR1P17423 357 aaKnown RBP2.37□□□□□ -2.03
LCD1YDR499W RNR1P21524 888 aaKnown RBP2.37□□□□□ -2.03
LCD1YDR499W MTC2P34246 357 aa2.37□□□□□ -2.03
LCD1YDR499W MIP6P38760 659 aaKnown RBP2.37□□□□□ -2.03
LCD1YDR499W RPN10P38886 268 aaKnown RBP2.37□□□□□ -2.03
LCD1YDR499W COX18P53239 316 aa2.37□□□□□ -2.03
LCD1YDR499W ICT1Q12385 394 aa2.37□□□□□ -2.03
LCD1YDR499W HOM2P13663 365 aaKnown RBP2.37□□□□□ -2.03
LCD1YDR499W SET3P36124 751 aa2.37□□□□□ -2.03
LCD1YDR499W YKR051WP36142 418 aa2.37□□□□□ -2.03
LCD1YDR499W CRP1P38845 465 aaKnown RBP2.36□□□□□ -2.03
LCD1YDR499W GLO1P50107 326 aa2.36□□□□□ -2.03
LCD1YDR499W NSE3Q05541 303 aa2.36□□□□□ -2.03
LCD1YDR499W RPN7Q06103 429 aaKnown RBP2.36□□□□□ -2.03
LCD1YDR499W ECM3Q99252 613 aa2.36□□□□□ -2.03
LCD1YDR499W CDC9P04819 755 aa2.36□□□□□ -2.03
LCD1YDR499W FUB1P25659 250 aa2.36□□□□□ -2.03
LCD1YDR499W TMT1P32643 299 aa2.36□□□□□ -2.03
LCD1YDR499W STO1P34160 861 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 347 ms