RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C CAF16P43569 289 aa3.98□□□□□ -1.77
SNU56YDR240C PRP31P49704 494 aaPredicted RBP3.98□□□□□ -1.77
SNU56YDR240C UBC11P52492 156 aa3.98□□□□□ -1.77
SNU56YDR240C TEL2P53038 688 aa3.98□□□□□ -1.77
SNU56YDR240C TEX1P53851 422 aaKnown RBP3.98□□□□□ -1.77
SNU56YDR240C ASM4Q05166 528 aa3.98□□□□□ -1.77
SNU56YDR240C YLR125WQ12138 136 aa3.98□□□□□ -1.77
SNU56YDR240C TIM23P32897 222 aa3.97□□□□□ -1.77
SNU56YDR240C APL2P36000 726 aaPredicted RBP3.97□□□□□ -1.77
SNU56YDR240C APT2P36973 181 aa3.97□□□□□ -1.77
SNU56YDR240C SSL2Q00578 843 aa3.97□□□□□ -1.77
SNU56YDR240C SNP1Q00916 300 aaPredicted RBP3.97□□□□□ -1.77
SNU56YDR240C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
SNU56YDR240C PCL5P38794 229 aa3.96□□□□□ -1.78
SNU56YDR240C REV7P38927 245 aa3.96□□□□□ -1.78
SNU56YDR240C CCT3P39077 534 aaKnown RBP3.96□□□□□ -1.78
SNU56YDR240C YFL052WP43551 465 aa3.96□□□□□ -1.78
SNU56YDR240C ORC4P54791 529 aa3.96□□□□□ -1.78
SNU56YDR240C MCM21Q06675 368 aa3.96□□□□□ -1.78
SNU56YDR240C MRH1Q12117 320 aaPredicted RBP3.96□□□□□ -1.78
SNU56YDR240C SIR3P06701 978 aa3.95□□□□□ -1.78
SNU56YDR240C GFA1P14742 717 aaKnown RBP3.95□□□□□ -1.78
SNU56YDR240C CDC43P18898 376 aa3.95□□□□□ -1.78
SNU56YDR240C HIS7P33734 552 aaKnown RBP3.95□□□□□ -1.78
SNU56YDR240C TRZ1P36159 838 aaPredicted RBP3.95□□□□□ -1.78
SNU56YDR240C MIP6P38760 659 aaKnown RBP3.95□□□□□ -1.78
SNU56YDR240C NUP82P40368 713 aa3.95□□□□□ -1.78
SNU56YDR240C ARG5,6Q01217 863 aa3.95□□□□□ -1.78
SNU56YDR240C UGO1Q03327 502 aa3.95□□□□□ -1.78
SNU56YDR240C CTK1Q03957 528 aaKnown RBP3.95□□□□□ -1.78
SNU56YDR240C COG8Q04632 607 aa3.95□□□□□ -1.78
SNU56YDR240C YLR149CQ99296 730 aa3.95□□□□□ -1.78
SNU56YDR240C CDC9P04819 755 aa3.94□□□□□ -1.78
SNU56YDR240C PHO8P11491 566 aa3.94□□□□□ -1.78
SNU56YDR240C HIR1P32479 840 aa3.94□□□□□ -1.78
SNU56YDR240C OSW7P43611 510 aa3.94□□□□□ -1.78
SNU56YDR240C NPY1P53164 384 aa3.94□□□□□ -1.78
SNU56YDR240C SMX3P54999 86 aaPredicted RBP3.94□□□□□ -1.78
SNU56YDR240C HCA4P20448 770 aaKnown RBP3.93□□□□□ -1.78
SNU56YDR240C ADE2P21264 571 aaKnown RBP3.93□□□□□ -1.78
SNU56YDR240C MSH2P25847 964 aa3.93□□□□□ -1.78
SNU56YDR240C YEL1P34225 687 aa3.93□□□□□ -1.78
SNU56YDR240C HSL7P38274 827 aa3.93□□□□□ -1.78
SNU56YDR240C YHR112CP38716 378 aa3.93□□□□□ -1.78
SNU56YDR240C NHX1Q04121 633 aa3.93□□□□□ -1.78
SNU56YDR240C PYC1P11154 1178 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C KIN3P22209 435 aa3.92□□□□□ -1.78
SNU56YDR240C DMC1P25453 334 aa3.92□□□□□ -1.78
SNU56YDR240C VBA3P25594 458 aa3.92□□□□□ -1.78
SNU56YDR240C HOG1P32485 435 aa3.92□□□□□ -1.78
SNU56YDR240C CUE2P36075 443 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C YKR018CP36114 725 aa3.92□□□□□ -1.78
SNU56YDR240C REC102Q02721 264 aa3.92□□□□□ -1.78
SNU56YDR240C LGE1Q02796 332 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C HMO1Q03973 246 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C CLF1Q12309 687 aaPredicted RBP3.92□□□□□ -1.78
SNU56YDR240C YKL033W-AQ86ZR7 236 aa3.92□□□□□ -1.78
SNU56YDR240C SRD1P09007 221 aa3.92□□□□□ -1.78
SNU56YDR240C MEF1P25039 761 aa3.92□□□□□ -1.78
SNU56YDR240C ILV6P25605 309 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C CBR1P38626 284 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C DSS1P39112 969 aa3.92□□□□□ -1.78
SNU56YDR240C NUP60P39705 539 aa3.92□□□□□ -1.78
SNU56YDR240C GID8P40208 455 aa3.92□□□□□ -1.78
SNU56YDR240C PCL10P53124 433 aa3.92□□□□□ -1.78
SNU56YDR240C VPS73P53142 486 aaKnown RBP3.92□□□□□ -1.78
SNU56YDR240C ORC1P54784 914 aaPredicted RBP3.92□□□□□ -1.78
SNU56YDR240C CIT2P08679 460 aa3.91□□□□□ -1.78
SNU56YDR240C MIH1P23748 554 aa3.91□□□□□ -1.78
SNU56YDR240C PEX6P33760 1030 aa3.91□□□□□ -1.78
SNU56YDR240C YKR051WP36142 418 aa3.91□□□□□ -1.78
SNU56YDR240C FMO1P38866 432 aa3.91□□□□□ -1.78
SNU56YDR240C YIL166CP40445 542 aa3.91□□□□□ -1.78
SNU56YDR240C MTL1P53214 551 aa3.91□□□□□ -1.78
SNU56YDR240C POB3Q04636 552 aaKnown RBP3.91□□□□□ -1.78
SNU56YDR240C RPN7Q06103 429 aaKnown RBP3.91□□□□□ -1.78
SNU56YDR240C FPR4Q06205 392 aaPredicted RBP3.91□□□□□ -1.78
SNU56YDR240C TAF3Q12297 353 aa3.91□□□□□ -1.78
SNU56YDR240C NDJ1Q12366 352 aa3.91□□□□□ -1.78
SNU56YDR240C THI4P32318 326 aa3.9□□□□□ -1.79
SNU56YDR240C MVD1P32377 396 aaKnown RBP3.9□□□□□ -1.79
SNU56YDR240C TDP1P38319 544 aa3.9□□□□□ -1.79
SNU56YDR240C LYS9P38999 446 aa3.9□□□□□ -1.79
SNU56YDR240C ARG2P40360 574 aa3.9□□□□□ -1.79
SNU56YDR240C NDC80P40460 691 aa3.9□□□□□ -1.79
SNU56YDR240C TAH11P47112 604 aa3.9□□□□□ -1.79
SNU56YDR240C PAN2P53010 1115 aaPredicted RBP3.9□□□□□ -1.79
SNU56YDR240C HRP1Q99383 534 aaKnown RBP3.9□□□□□ -1.79
SNU56YDR240C Q0142Q9ZZW4 58 aa3.9□□□□□ -1.79
SNU56YDR240C YTA7P40340 1379 aa3.9□□□□□ -1.79
SNU56YDR240C YJL206CP39529 758 aa3.89□□□□□ -1.79
SNU56YDR240C FHN1P53279 174 aa3.89□□□□□ -1.79
SNU56YDR240C BDH2P39713 417 aa3.88□□□□□ -1.79
SNU56YDR240C DOT6P40059 670 aaKnown RBP3.88□□□□□ -1.79
SNU56YDR240C SUT2Q12286 268 aa3.88□□□□□ -1.79
SNU56YDR240C MET6P05694 767 aaKnown RBP3.87□□□□□ -1.79
SNU56YDR240C RNR1P21524 888 aaKnown RBP3.87□□□□□ -1.79
SNU56YDR240C PEX1P24004 1043 aa3.87□□□□□ -1.79
SNU56YDR240C PHO11P35842 467 aa3.87□□□□□ -1.79
SNU56YDR240C GLG1P36143 616 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms