RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	SRD1	P09007	221 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	RPO26	P20435	155 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	PER1	P25625	357 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	MCD4	P36051	919 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	JNM1	P36224	373 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	ERC1	P38767	581 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	SMC2	P38989	1170 aa	Known RBP	5.08	□□□□□ -1.6
SUP35	YDR172W	RGA1	P39083	1007 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	RPN3	P40016	523 aa	Known RBP	5.08	□□□□□ -1.6
SUP35	YDR172W	MAL13	P53338	473 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	DIG1	Q03063	452 aa	Known RBP	5.08	□□□□□ -1.6
SUP35	YDR172W	GYL1	Q04322	720 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	UTP14	Q04500	899 aa	Known RBP	5.08	□□□□□ -1.6
SUP35	YDR172W	ATG23	Q06671	453 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	MED1	Q12321	566 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	CKI1	P20485	582 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	PRP22	P24384	1145 aa	Known RBP	5.08	□□□□□ -1.6
SUP35	YDR172W	HXT1	P32465	570 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	YKR018C	P36114	725 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	YIL089W	P40500	205 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	LCB2	P40970	561 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	SEC5	P89102	971 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
SUP35	YDR172W	YMR114C	Q04471	368 aa	Known RBP	5.08	□□□□□ -1.6
SUP35	YDR172W	UBX5	Q06682	500 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	OPY2	Q06810	360 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	OSH2	Q12451	1283 aa		5.08	□□□□□ -1.6
SUP35	YDR172W	ERG11	P10614	530 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	GFA1	P14742	717 aa	Known RBP	5.07	□□□□□ -1.6
SUP35	YDR172W	DIT1	P21623	536 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	VMA3	P25515	160 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	YEL043W	P32618	956 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	KTR2	P33550	425 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	RRP1	P35178	278 aa	Predicted RBP	5.07	□□□□□ -1.6
SUP35	YDR172W	HUL5	P53119	910 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	CNM67	P53865	581 aa	Known RBP	5.07	□□□□□ -1.6
SUP35	YDR172W	YPL062W	Q02781	134 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	GIR2	Q03768	265 aa	Predicted RBP	5.07	□□□□□ -1.6
SUP35	YDR172W	DUS3	Q06053	668 aa	Known RBP	5.07	□□□□□ -1.6
SUP35	YDR172W	SPH1	Q06160	661 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	YPR078C	Q06813	372 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	MLH2	Q07980	695 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	DAS2	Q12084	232 aa		5.07	□□□□□ -1.6
SUP35	YDR172W	KAP122	P32767	1081 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	BYE1	P36106	594 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	MRPL16	P38064	232 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	QDR2	P40474	542 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	FIS1	P40515	155 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	MTO1	P53070	669 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	NCS2	P53923	493 aa	Predicted RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	YLR297W	Q05899	129 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	CRD1	Q07560	283 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	GUD1	Q07729	489 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	RMP1	Q12530	201 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	LSO1	Q3E827	93 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	PGK1	P00560	416 aa	Known RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	TRP2	P00899	507 aa	Known RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	PCK1	P10963	549 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	VMA2	P16140	517 aa	Known RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	UTR4	P32626	227 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	MIC19	P43594	170 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	RPS0B	P46654	252 aa	Known RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	CWC22	P53333	577 aa	Known RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	PTA1	Q01329	785 aa	Predicted RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	YMR265C	Q03508	461 aa	Known RBP	5.06	□□□□□ -1.6
SUP35	YDR172W	SVF1	Q05515	481 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	PHM6	Q05637	104 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	SFH1	Q06168	426 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	STB3	Q12427	513 aa		5.06	□□□□□ -1.6
SUP35	YDR172W	CHS2	P14180	963 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	CDC48	P25694	835 aa	Known RBP	5.05	□□□□□ -1.6
SUP35	YDR172W	CDC11	P32458	415 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	ECM32	P32644	1121 aa	Known RBP	5.05	□□□□□ -1.6
SUP35	YDR172W	MCR1	P36060	302 aa	Known RBP	5.05	□□□□□ -1.6
SUP35	YDR172W	UBP13	P38187	747 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	GPB2	P39717	880 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	RAD26	P40352	1085 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	SPR3	P41901	512 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	NET1	P47035	1189 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	VID30	P53076	958 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	BTN2	P53286	410 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	URH1	Q04179	340 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	POB3	Q04636	552 aa	Known RBP	5.05	□□□□□ -1.6
SUP35	YDR172W	CSR1	Q06705	408 aa	Known RBP	5.05	□□□□□ -1.6
SUP35	YDR172W	SLX4	Q12098	748 aa		5.05	□□□□□ -1.6
SUP35	YDR172W	CFT2	Q12102	859 aa	Predicted RBP	5.05	□□□□□ -1.6
SUP35	YDR172W	TY1B-A	O13527	1196 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	FUR4	P05316	633 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	PHO8	P11491	566 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	DBP5	P20449	482 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	NAM7	P30771	971 aa	Known RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	RRN6	P32786	894 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	CTK3	P46963	296 aa	Predicted RBP	5.04	□□□□□ -1.6
SUP35	YDR172W	AVT1	P47082	602 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	YAF9	P53930	226 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	YDR278C	Q05612	105 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	DUS4	Q06063	367 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	SWI6	P09959	803 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	MSH1	P25846	959 aa		5.04	□□□□□ -1.6
SUP35	YDR172W	YKL050C	P35736	922 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms