RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	OLE1	P21147	510 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	MSM1	P22438	575 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	FPS1	P23900	669 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	KIP1	P28742	1111 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	LEM3	P42838	414 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	ERV25	P54837	211 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	REG1	Q00816	1014 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	YMR265C	Q03508	461 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	RKM2	Q03942	479 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	HLR1	Q04429	423 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	YOL114C	Q12322	202 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	GPM1	P00950	247 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	SWI6	P09959	803 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	SFL1	P20134	766 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	RRP7	P25368	297 aa	Predicted RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	SRO9	P25567	434 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	CDC12	P32468	407 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	PGM2	P37012	569 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	REI1	P38344	393 aa	Predicted RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	ACO2	P39533	789 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	TMA108	P40462	946 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	NOP9	P47077	666 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	HLJ1	P48353	224 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	SCW11	P53189	542 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	CNM67	P53865	581 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	PRP42	Q03776	544 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	YDR306C	Q06640	478 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	GIC2	Q06648	383 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	FAP7	Q12055	197 aa	Predicted RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	GNT1	Q12096	491 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	YOL159C-A	Q3E769	90 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	RPL19A	P0CX82	189 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	RPL19B	P0CX83	189 aa	Predicted RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	SWC3	P31376	625 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	YKL050C	P35736	922 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	PIM1	P36775	1133 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	BIT2	P38346	545 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	GCV1	P48015	400 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	VMS1	Q04311	632 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	RSA3	Q05942	220 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	MRD1	Q06106	887 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	INH1	P01097	85 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	GUK1	P15454	187 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	URA7	P28274	579 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	RME1	P32338	300 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	STE13	P33894	931 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	PCH2	P38126	564 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	YBL028C	P38202	106 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	YBR138C	P38277	524 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	YBR225W	P38321	900 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	RGD1	P38339	666 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	HSM3	P38348	480 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	QNS1	P38795	714 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	FET5	P43561	622 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	MAD3	P47074	515 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	SDA1	P53313	767 aa	Known RBP	3.17	□□□□□ -1.9
SOK1	YDR006C	ZDS2	P54786	942 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	GAS5	Q08193	484 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	HAL9	Q12180	1030 aa		3.17	□□□□□ -1.9
SOK1	YDR006C	MTF2	P10849	440 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	GLK1	P17709	500 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	SNF5	P18480	905 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	CCR4	P31384	837 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	SEC21	P32074	935 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	UGA2	P38067	497 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	IFA38	P38286	347 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	TSL1	P38427	1098 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	LAM1	P38851	1228 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	VHR1	P40522	640 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	YGR035C	P53222	116 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	REX2	P54964	269 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	PXA2	P34230	853 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	GND1	P38720	489 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	CKB2	P38930	258 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	YAR028W	P39548	234 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	CAF16	P43569	289 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	SET2	P46995	733 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	YJL045W	P47052	634 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	YGR283C	P53336	341 aa	Predicted RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	YNR061C	P53747	219 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	RAD33	Q04231	177 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	RPC11	Q04307	110 aa	Predicted RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	ARV1	Q06541	321 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	YDL124W	Q07551	312 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	XYL2	Q07993	356 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	ESC8	Q08119	714 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	TRE2	Q08693	809 aa		3.16	□□□□□ -1.9
SOK1	YDR006C	BMS1	Q08965	1183 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	RPS21B	Q3E754	87 aa	Known RBP	3.16	□□□□□ -1.9
SOK1	YDR006C	JIP3	O13555	125 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	SEC18	P18759	758 aa	Known RBP	3.15	□□□□□ -1.9
SOK1	YDR006C	ROX1	P25042	368 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	YME1	P32795	747 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	TFC3	P34111	1160 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	GEX2	P36173	615 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	ARL1	P38116	183 aa	Known RBP	3.15	□□□□□ -1.9
SOK1	YDR006C	SHU2	P38957	223 aa		3.15	□□□□□ -1.9
SOK1	YDR006C	GZF3	P42944	551 aa	Known RBP	3.15	□□□□□ -1.9
SOK1	YDR006C	FYV8	P46949	817 aa	Known RBP	3.15	□□□□□ -1.9
SOK1	YDR006C	LYS4	P49367	693 aa	Predicted RBP	3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms