RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	REC8	Q12188	680 aa		5	□□□□□ -1.61
RPN6	YDL097C	RVB2	Q12464	471 aa	Known RBP	5	□□□□□ -1.61
RPN6	YDL097C	YIL046W-A	Q3E7Z4	54 aa		5	□□□□□ -1.61
RPN6	YDL097C	POL2	P21951	2222 aa	Known RBP	5	□□□□□ -1.61
RPN6	YDL097C	DED1	P06634	604 aa	Known RBP	4.99	□□□□□ -1.61
RPN6	YDL097C	GLN3	P18494	730 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	SRP54	P20424	541 aa	Known RBP	4.99	□□□□□ -1.61
RPN6	YDL097C	IMP2'	P32351	346 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	SWE1	P32944	819 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	UBP11	P36026	717 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	ROM1	P53046	1155 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	ADA2	Q02336	434 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	DFG5	Q05031	458 aa		4.99	□□□□□ -1.61
RPN6	YDL097C	ANP1	P32629	500 aa		4.98	□□□□□ -1.61
RPN6	YDL097C	SUL1	P38359	859 aa		4.98	□□□□□ -1.61
RPN6	YDL097C	BAT1	P38891	393 aa	Known RBP	4.98	□□□□□ -1.61
RPN6	YDL097C	PIK1	P39104	1066 aa		4.98	□□□□□ -1.61
RPN6	YDL097C	GDH3	P39708	457 aa		4.98	□□□□□ -1.61
RPN6	YDL097C	DOT6	P40059	670 aa	Known RBP	4.98	□□□□□ -1.61
RPN6	YDL097C	YLR456W	Q06199	204 aa		4.98	□□□□□ -1.61
RPN6	YDL097C	FLC1	Q08967	793 aa		4.98	□□□□□ -1.61
RPN6	YDL097C	PGK1	P00560	416 aa	Known RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	AI1	P03875	834 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	SBP1	P10080	294 aa	Known RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	TMT1	P32643	299 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	PEP12	P32854	288 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	MKS1	P34072	584 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	RGD1	P38339	666 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	IML2	P47031	731 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	CCT8	P47079	568 aa	Known RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	ALO1	P54783	526 aa	Known RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	YDL144C	Q07589	356 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	MCM16	Q12262	181 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	RPT1	P33299	467 aa	Known RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	PCA1	P38360	1216 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	IES1	P43579	692 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	MLC1	P53141	149 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	UTP8	P53276	713 aa	Known RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	NRM1	P53718	249 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	EEB1	Q02891	456 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	PHM6	Q05637	104 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	EST2	Q06163	884 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	SMC5	Q08204	1093 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	LEA1	Q08963	238 aa	Predicted RBP	4.97	□□□□□ -1.61
RPN6	YDL097C	APM4	Q99186	491 aa		4.97	□□□□□ -1.61
RPN6	YDL097C	IPP1	P00817	287 aa	Known RBP	4.96	□□□□□ -1.62
RPN6	YDL097C	PFK1	P16861	987 aa	Known RBP	4.96	□□□□□ -1.62
RPN6	YDL097C	RDS2	P19541	446 aa	Known RBP	4.96	□□□□□ -1.62
RPN6	YDL097C	PPH22	P23595	377 aa		4.96	□□□□□ -1.62
RPN6	YDL097C	GCD7	P32502	381 aa	Predicted RBP	4.96	□□□□□ -1.62
RPN6	YDL097C	KTR7	P40504	517 aa		4.96	□□□□□ -1.62
RPN6	YDL097C	YFL066C	P43538	392 aa		4.96	□□□□□ -1.62
RPN6	YDL097C	SPC98	P53540	846 aa		4.96	□□□□□ -1.62
RPN6	YDL097C	SUR7	P54003	302 aa		4.96	□□□□□ -1.62
RPN6	YDL097C	COQ9	Q05779	260 aa		4.96	□□□□□ -1.62
RPN6	YDL097C	RAD50	P12753	1312 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	GAL4	P04386	881 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	TOM70	P07213	617 aa	Known RBP	4.95	□□□□□ -1.62
RPN6	YDL097C	FPR1	P20081	114 aa	Known RBP	4.95	□□□□□ -1.62
RPN6	YDL097C	ISF1	P32488	338 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	MIA40	P36046	403 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	MET1	P36150	593 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	YBR284W	P38150	797 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	GGA2	P38817	585 aa	Known RBP	4.95	□□□□□ -1.62
RPN6	YDL097C	SIP5	P40210	489 aa	Known RBP	4.95	□□□□□ -1.62
RPN6	YDL097C	LTP1	P40347	161 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	ORC4	P54791	529 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	ECM23	Q02710	187 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	MYO5	Q04439	1219 aa	Known RBP	4.95	□□□□□ -1.62
RPN6	YDL097C	YDR341C	Q05506	607 aa	Known RBP	4.95	□□□□□ -1.62
RPN6	YDL097C	BDS1	Q08347	646 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	DSE3	Q08729	430 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	YPQ1	Q12010	308 aa		4.95	□□□□□ -1.62
RPN6	YDL097C	COX4	P04037	155 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	HXK1	P04806	485 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	NOT3	P06102	836 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	MTF1	P14908	341 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	CCR4	P31384	837 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	ATG19	P35193	415 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	AAP1	P37898	856 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	TIF5	P38431	405 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	OSH3	P38713	996 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	WSC4	P38739	605 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	ERV46	P39727	415 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	YJR061W	P40355	935 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	VTC2	P43585	828 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	ASE1	P50275	885 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	CNM67	P53865	581 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	CUZ1	P53899	274 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RPN6	YDL097C	HOS3	Q02959	697 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	OYE2	Q03558	400 aa	Known RBP	4.94	□□□□□ -1.62
RPN6	YDL097C	YPR053C	Q6Q5F3	151 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	PDR18	P53756	1333 aa		4.94	□□□□□ -1.62
RPN6	YDL097C	MAK31	P23059	88 aa		4.93	□□□□□ -1.62
RPN6	YDL097C	YCL042W	P25572	119 aa		4.93	□□□□□ -1.62
RPN6	YDL097C	PDC6	P26263	563 aa	Known RBP	4.93	□□□□□ -1.62
RPN6	YDL097C	BRF1	P29056	596 aa		4.93	□□□□□ -1.62
RPN6	YDL097C	YNG2	P38806	282 aa	Known RBP	4.93	□□□□□ -1.62
RPN6	YDL097C	CEM1	P39525	442 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 111.6 ms