RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	AIM26	P32858	118 aa		5	□□□□□ -1.61
RTK1	YDL025C	YKR018C	P36114	725 aa		5	□□□□□ -1.61
RTK1	YDL025C	YIL108W	P40483	696 aa	Known RBP	5	□□□□□ -1.61
RTK1	YDL025C	TAF1	P46677	1066 aa		5	□□□□□ -1.61
RTK1	YDL025C	ZIP2	P53061	704 aa		5	□□□□□ -1.61
RTK1	YDL025C	BUD9	P53226	547 aa		5	□□□□□ -1.61
RTK1	YDL025C	CNM67	P53865	581 aa	Known RBP	5	□□□□□ -1.61
RTK1	YDL025C	HAL9	Q12180	1030 aa		5	□□□□□ -1.61
RTK1	YDL025C	YOL114C	Q12322	202 aa		5	□□□□□ -1.61
RTK1	YDL025C	GFD2	P25370	566 aa	Known RBP	5	□□□□□ -1.61
RTK1	YDL025C	YKR075C	P36155	307 aa		5	□□□□□ -1.61
RTK1	YDL025C	AIM21	P40563	679 aa		5	□□□□□ -1.61
RTK1	YDL025C	HIM1	Q06674	414 aa		5	□□□□□ -1.61
RTK1	YDL025C	BRE1	Q07457	700 aa	Known RBP	5	□□□□□ -1.61
RTK1	YDL025C	DCS2	Q12123	353 aa		5	□□□□□ -1.61
RTK1	YDL025C	NSI1	Q12457	570 aa		5	□□□□□ -1.61
RTK1	YDL025C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RTK1	YDL025C	SEC18	P18759	758 aa	Known RBP	4.99	□□□□□ -1.61
RTK1	YDL025C	ATP12	P22135	325 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	SRP101	P32916	621 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	MPE1	P35728	441 aa	Known RBP	4.99	□□□□□ -1.61
RTK1	YDL025C	CIT3	P43635	486 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	PCL10	P53124	433 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	HOL1	P53389	586 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	RCM1	P53972	490 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	GPD1	Q00055	391 aa	Known RBP	4.99	□□□□□ -1.61
RTK1	YDL025C	SSL1	Q04673	461 aa	Predicted RBP	4.99	□□□□□ -1.61
RTK1	YDL025C	THI21	Q08975	551 aa		4.99	□□□□□ -1.61
RTK1	YDL025C	AKR1	P39010	764 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	SBE2	P42223	864 aa	Known RBP	4.98	□□□□□ -1.61
RTK1	YDL025C	IML2	P47031	731 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	AI3	P03877	415 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	SPS1	P08458	490 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	KIN2	P13186	1147 aa	Known RBP	4.98	□□□□□ -1.61
RTK1	YDL025C	MSH1	P25846	959 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	ASK10	P48361	1146 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	UBA2	P52488	636 aa		4.98	□□□□□ -1.61
RTK1	YDL025C	DUS1	P53759	423 aa	Known RBP	4.98	□□□□□ -1.61
RTK1	YDL025C	CEG1	Q01159	459 aa	Predicted RBP	4.98	□□□□□ -1.61
RTK1	YDL025C	YPK9	Q12697	1472 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	TY1B-BR	Q12193	1756 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	TY1B-GR3	Q12316	1755 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	TY1B-OR	Q92393	1755 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	HSF1	P10961	833 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	GTS1	P40956	396 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	ERR3	P42222	437 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	TRE1	Q08919	783 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	CWC2	Q12046	339 aa	Predicted RBP	4.97	□□□□□ -1.61
RTK1	YDL025C	NUR1	Q12066	484 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	PAN1	P32521	1480 aa		4.97	□□□□□ -1.61
RTK1	YDL025C	GLN4	P13188	809 aa	Known RBP	4.96	□□□□□ -1.61
RTK1	YDL025C	HOP1	P20050	605 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	MSM1	P22438	575 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	SSZ1	P38788	538 aa	Known RBP	4.96	□□□□□ -1.61
RTK1	YDL025C	SAW1	P39735	261 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	YIL092W	P40497	633 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	YJR039W	P47107	1121 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	YGR012W	P53206	393 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	TEP1	P53916	434 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	ARP4	P80428	489 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	OMS1	Q06668	471 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	SSP2	Q08646	371 aa		4.96	□□□□□ -1.61
RTK1	YDL025C	AI1	P03875	834 aa		4.96	□□□□□ -1.62
RTK1	YDL025C	PET309	P32522	965 aa	Predicted RBP	4.96	□□□□□ -1.62
RTK1	YDL025C	BEM3	P32873	1128 aa		4.96	□□□□□ -1.62
RTK1	YDL025C	MFT1	P33441	392 aa	Known RBP	4.96	□□□□□ -1.62
RTK1	YDL025C	PTC7	P38797	343 aa		4.96	□□□□□ -1.62
RTK1	YDL025C	RPT2	P40327	437 aa	Known RBP	4.96	□□□□□ -1.62
RTK1	YDL025C	RSM24	Q03976	319 aa		4.96	□□□□□ -1.62
RTK1	YDL025C	SWI6	P09959	803 aa		4.95	□□□□□ -1.62
RTK1	YDL025C	PEX7	P39108	375 aa		4.95	□□□□□ -1.62
RTK1	YDL025C	VID28	P40547	921 aa		4.95	□□□□□ -1.62
RTK1	YDL025C	SSY5	P47002	699 aa		4.95	□□□□□ -1.62
RTK1	YDL025C	ARI1	P53111	347 aa	Known RBP	4.95	□□□□□ -1.62
RTK1	YDL025C	NOP15	P53927	220 aa	Predicted RBP	4.95	□□□□□ -1.62
RTK1	YDL025C	MSC2	Q03455	724 aa		4.95	□□□□□ -1.62
RTK1	YDL025C	NGL1	Q08213	363 aa	Known RBP	4.95	□□□□□ -1.62
RTK1	YDL025C	ESP1	Q03018	1630 aa		4.95	□□□□□ -1.62
RTK1	YDL025C	PHO3	P24031	467 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	MCM10	P32354	571 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	ABZ1	P37254	787 aa	Predicted RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	YHR202W	P38887	602 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	EAF5	P39995	279 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	ZRG8	P40021	1076 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	OYE3	P41816	400 aa	Predicted RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	PRY1	P47032	299 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	MOT3	P54785	490 aa	Known RBP	4.94	□□□□□ -1.62
RTK1	YDL025C	YMR210W	Q03649	449 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	YLR407W	Q06070	228 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	BLS1	Q06071	122 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	CDA1	Q06702	301 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	RRI2	Q12348	645 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	YRF1-1	P0CX20	1796 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	YRF1-5	P0CX21	1796 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	YRF1-8	P0CX22	1796 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	SIN3	P22579	1536 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	INH1	P01097	85 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	DGR2	P32330	852 aa		4.94	□□□□□ -1.62
RTK1	YDL025C	SDS22	P36047	338 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 95.1 ms