RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	LRS4	Q04087	347 aa	Known RBP	6.11	□□□□□ -1.43
SLX1	YBR228W	IRC20	Q06554	1556 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	VPS15	P22219	1454 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	YCL002C	P25565	263 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	NGG1	P32494	702 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	GYP8	P43570	497 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	SSY5	P47002	699 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	RSC3	Q06639	885 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	HBT1	Q07653	1046 aa	Known RBP	6.1	□□□□□ -1.43
SLX1	YBR228W	FLC1	Q08967	793 aa		6.1	□□□□□ -1.43
SLX1	YBR228W	LTE1	P07866	1435 aa		6.09	□□□□□ -1.43
SLX1	YBR228W	YPT53	P36019	220 aa		6.09	□□□□□ -1.43
SLX1	YBR228W	EMC3	P36039	253 aa		6.09	□□□□□ -1.43
SLX1	YBR228W	DAS1	P47005	663 aa		6.09	□□□□□ -1.43
SLX1	YBR228W	GND2	P53319	492 aa		6.09	□□□□□ -1.43
SLX1	YBR228W	TAF8	Q03750	510 aa		6.09	□□□□□ -1.43
SLX1	YBR228W	YBT1	P32386	1661 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	MTH1	P35198	433 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	SPC42	P36094	363 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	DAM1	P53267	343 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	YML122C	Q03207	126 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	MUS81	Q04149	632 aa	Predicted RBP	6.08	□□□□□ -1.44
SLX1	YBR228W	ADY4	Q05955	493 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	IRC10	Q08118	586 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	PDR12	Q02785	1511 aa		6.08	□□□□□ -1.44
SLX1	YBR228W	GEA1	P47102	1408 aa	Predicted RBP	6.08	□□□□□ -1.44
SLX1	YBR228W	SHR5	P41912	237 aa		6.07	□□□□□ -1.44
SLX1	YBR228W	ALG2	P43636	503 aa		6.07	□□□□□ -1.44
SLX1	YBR228W	NRG1	Q03125	231 aa		6.07	□□□□□ -1.44
SLX1	YBR228W	TY3B-G	Q99315	1547 aa		6.07	□□□□□ -1.44
SLX1	YBR228W	GDB1	Q06625	1536 aa		6.06	□□□□□ -1.44
SLX1	YBR228W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
SLX1	YBR228W	BET3	P36149	193 aa		6.06	□□□□□ -1.44
SLX1	YBR228W	YHR020W	P38708	688 aa	Known RBP	6.06	□□□□□ -1.44
SLX1	YBR228W	YHL017W	P38745	532 aa		6.06	□□□□□ -1.44
SLX1	YBR228W	PFA3	P42836	336 aa		6.06	□□□□□ -1.44
SLX1	YBR228W	QRI1	P43123	477 aa	Known RBP	6.06	□□□□□ -1.44
SLX1	YBR228W	HUL5	P53119	910 aa		6.06	□□□□□ -1.44
SLX1	YBR228W	YGR283C	P53336	341 aa	Predicted RBP	6.06	□□□□□ -1.44
SLX1	YBR228W	YDR514C	Q04408	483 aa		6.06	□□□□□ -1.44
SLX1	YBR228W	SET5	P38890	526 aa	Known RBP	6.05	□□□□□ -1.44
SLX1	YBR228W	YJL049W	P47048	450 aa		6.05	□□□□□ -1.44
SLX1	YBR228W	AMA1	P50082	593 aa		6.05	□□□□□ -1.44
SLX1	YBR228W	REH1	Q06709	432 aa		6.05	□□□□□ -1.44
SLX1	YBR228W	BNI1	P41832	1953 aa		6.05	□□□□□ -1.44
SLX1	YBR228W	YLR415C	O13578	112 aa		6.04	□□□□□ -1.44
SLX1	YBR228W	YBR053C	P38235	358 aa		6.04	□□□□□ -1.44
SLX1	YBR228W	SDS3	P40505	327 aa		6.04	□□□□□ -1.44
SLX1	YBR228W	YJL163C	P46996	555 aa		6.04	□□□□□ -1.44
SLX1	YBR228W	MET7	Q08645	548 aa		6.03	□□□□□ -1.44
SLX1	YBR228W	CAN1	P04817	590 aa		6.02	□□□□□ -1.45
SLX1	YBR228W	PCL5	P38794	229 aa		6.02	□□□□□ -1.45
SLX1	YBR228W	RSP5	P39940	809 aa	Known RBP	6.02	□□□□□ -1.45
SLX1	YBR228W	MTR3	P48240	250 aa	Predicted RBP	6.02	□□□□□ -1.45
SLX1	YBR228W	RTA1	P53047	317 aa		6.02	□□□□□ -1.45
SLX1	YBR228W	CDC53	Q12018	815 aa	Known RBP	6.02	□□□□□ -1.45
SLX1	YBR228W	MRH1	Q12117	320 aa	Predicted RBP	6.02	□□□□□ -1.45
SLX1	YBR228W	PDR10	P51533	1564 aa		6.01	□□□□□ -1.45
SLX1	YBR228W	NUP170	P38181	1502 aa		6.01	□□□□□ -1.45
SLX1	YBR228W	GAL11	P19659	1081 aa		6.01	□□□□□ -1.45
SLX1	YBR228W	PER1	P25625	357 aa		6.01	□□□□□ -1.45
SLX1	YBR228W	HIS7	P33734	552 aa	Known RBP	6.01	□□□□□ -1.45
SLX1	YBR228W	GGA2	P38817	585 aa	Known RBP	6.01	□□□□□ -1.45
SLX1	YBR228W	YIR042C	P40586	236 aa		6.01	□□□□□ -1.45
SLX1	YBR228W	IRC13	Q08630	104 aa		6.01	□□□□□ -1.45
SLX1	YBR228W	CAT8	P39113	1433 aa		6	□□□□□ -1.45
SLX1	YBR228W	DIF1	O13577	133 aa		6	□□□□□ -1.45
SLX1	YBR228W	LGE1	Q02796	332 aa	Known RBP	6	□□□□□ -1.45
SLX1	YBR228W	BDF2	Q07442	638 aa		6	□□□□□ -1.45
SLX1	YBR228W	THI21	Q08975	551 aa		6	□□□□□ -1.45
SLX1	YBR228W	NUP157	P40064	1391 aa	Known RBP	6	□□□□□ -1.45
SLX1	YBR228W	ARO1	P08566	1588 aa	Known RBP	5.99	□□□□□ -1.45
SLX1	YBR228W	ATF1	P40353	525 aa		5.99	□□□□□ -1.45
SLX1	YBR228W	RLP7	P40693	322 aa	Known RBP	5.99	□□□□□ -1.45
SLX1	YBR228W	ZDS1	P50111	915 aa	Known RBP	5.99	□□□□□ -1.45
SLX1	YBR228W	ASM4	Q05166	528 aa		5.99	□□□□□ -1.45
SLX1	YBR228W	TGL5	Q12043	749 aa		5.99	□□□□□ -1.45
SLX1	YBR228W	YBR182C-A	Q8TGU6	64 aa		5.99	□□□□□ -1.45
SLX1	YBR228W	DOP1	Q03921	1698 aa		5.98	□□□□□ -1.45
SLX1	YBR228W	IQG1	Q12280	1495 aa		5.98	□□□□□ -1.45
SLX1	YBR228W	SPC29	P33419	253 aa		5.98	□□□□□ -1.45
SLX1	YBR228W	SIC1	P38634	284 aa		5.98	□□□□□ -1.45
SLX1	YBR228W	ALY2	P47029	1046 aa		5.98	□□□□□ -1.45
SLX1	YBR228W	HSV2	P50079	448 aa	Predicted RBP	5.98	□□□□□ -1.45
SLX1	YBR228W	RIA1	P53893	1110 aa		5.98	□□□□□ -1.45
SLX1	YBR228W	DRS2	P39524	1355 aa		5.97	□□□□□ -1.45
SLX1	YBR228W	LAT1	P12695	482 aa	Known RBP	5.97	□□□□□ -1.45
SLX1	YBR228W	ZIP2	P53061	704 aa		5.97	□□□□□ -1.45
SLX1	YBR228W	ATP25	Q03153	612 aa		5.97	□□□□□ -1.45
SLX1	YBR228W	SEC7	P11075	2009 aa	Known RBP	5.97	□□□□□ -1.45
SLX1	YBR228W	BUD3	P25558	1636 aa		5.96	□□□□□ -1.45
SLX1	YBR228W	CBR1	P38626	284 aa	Known RBP	5.96	□□□□□ -1.46
SLX1	YBR228W	CDC43	P18898	376 aa		5.95	□□□□□ -1.46
SLX1	YBR228W	TDP1	P38319	544 aa		5.95	□□□□□ -1.46
SLX1	YBR228W	BCD1	P38772	366 aa		5.95	□□□□□ -1.46
SLX1	YBR228W	GAD1	Q04792	585 aa		5.95	□□□□□ -1.46
SLX1	YBR228W	GPR1	Q12361	961 aa		5.95	□□□□□ -1.46
SLX1	YBR228W	CHC1	P22137	1653 aa	Known RBP	5.94	□□□□□ -1.46
SLX1	YBR228W	GFA1	P14742	717 aa	Known RBP	5.94	□□□□□ -1.46
SLX1	YBR228W	CUE2	P36075	443 aa	Known RBP	5.94	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 65 ms