RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	ROX1	P25042	368 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	RAD27	P26793	382 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	APL1	P27351	700 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	YBR284W	P38150	797 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	CTM1	P38818	585 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	OYE3	P41816	400 aa	Predicted RBP	6.25	□□□□□ -1.41
ATG12	YBR217W	SMC3	P47037	1230 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	CPR7	P47103	393 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	RPA49	Q01080	415 aa	Predicted RBP	6.25	□□□□□ -1.41
ATG12	YBR217W	WAR1	Q03631	944 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	YLR297W	Q05899	129 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	SDH5	Q08230	162 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	CWC2	Q12046	339 aa	Predicted RBP	6.25	□□□□□ -1.41
ATG12	YBR217W	YPR027C	Q12079	277 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	DAP1	Q12091	152 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	GIS3	Q12418	502 aa		6.25	□□□□□ -1.41
ATG12	YBR217W	ATP1	P07251	545 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	CHS1	P08004	1131 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	RPS6A	P0CX37	236 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	RPS6B	P0CX38	236 aa	Predicted RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	SCJ1	P25303	377 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	SHM1	P37292	490 aa	Predicted RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	MIP6	P38760	659 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	SAH1	P39954	449 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	KAP123	P40069	1113 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	FYV8	P46949	817 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	ZAP1	P47043	880 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	COS5	P47187	383 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	RSC1	P53236	928 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	STE20	Q03497	939 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	TIF35	Q04067	274 aa	Known RBP	6.24	□□□□□ -1.41
ATG12	YBR217W	PPM1	Q04081	328 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	PIG1	Q06216	648 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	MNL2	Q12205	849 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	YBL029C-A	Q3E756	94 aa		6.24	□□□□□ -1.41
ATG12	YBR217W	GAL10	P04397	699 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	SNF1	P06782	633 aa	Known RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	SPE1	P08432	466 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	MAS1	P10507	462 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	KGD2	P19262	463 aa	Predicted RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	RNR1	P21524	888 aa	Known RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	MSH3	P25336	1018 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	PGS1	P25578	521 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	SEC65	P29478	273 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	EFB1	P32471	206 aa	Known RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	VPH1	P32563	840 aa	Known RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	XRS2	P33301	854 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	SLA2	P33338	968 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	RDH54	P38086	958 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	EFM2	P38347	419 aa		6.23	□□□□□ -1.41
ATG12	YBR217W	SBE2	P42223	864 aa	Known RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
ATG12	YBR217W	CSR1	Q06705	408 aa	Known RBP	6.23	□□□□□ -1.41
ATG12	YBR217W	TPK1	P06244	397 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	COX11	P19516	300 aa	Known RBP	6.22	□□□□□ -1.41
ATG12	YBR217W	DAL2	P25335	343 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	COQ8	P27697	501 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	KIP1	P28742	1111 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	KNS1	P32350	737 aa	Predicted RBP	6.22	□□□□□ -1.41
ATG12	YBR217W	FRE1	P32791	686 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	YBR056W	P38081	501 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	RKM3	P38222	552 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	SIF2	P38262	535 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	SSP1	P38871	571 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	GEM1	P39722	662 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	DRN1	P53255	507 aa	Known RBP	6.22	□□□□□ -1.41
ATG12	YBR217W	ADA2	Q02336	434 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	MUB1	Q03162	620 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	LEA1	Q08963	238 aa	Predicted RBP	6.22	□□□□□ -1.41
ATG12	YBR217W	HRT3	Q12347	344 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	APM4	Q99186	491 aa		6.22	□□□□□ -1.41
ATG12	YBR217W	PDE1	P22434	369 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	PEP7	P32609	515 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	SMC1	P32908	1225 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	NIP100	P33420	868 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	CSG2	P35206	410 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	SAP190	P36123	1033 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	YNL011C	P53980	444 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	PRM6	Q04705	352 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	TSR1	Q07381	788 aa	Known RBP	6.21	□□□□□ -1.42
ATG12	YBR217W	SGO1	Q08490	590 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	ECM3	Q99252	613 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	AI5_BETA	Q9ZZX0	354 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	FAB1	P34756	2278 aa		6.21	□□□□□ -1.42
ATG12	YBR217W	TOR2	P32600	2474 aa	Known RBP	6.2	□□□□□ -1.42
ATG12	YBR217W	BEM2	P39960	2167 aa	Known RBP	6.2	□□□□□ -1.42
ATG12	YBR217W	APE1	P14904	514 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	VBA3	P25594	458 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	GAC1	P28006	793 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	VBA5	P36172	582 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	SHE3	P38272	425 aa	Known RBP	6.2	□□□□□ -1.42
ATG12	YBR217W	SAF1	P38352	637 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	LEO1	P38439	464 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	PEX28	P38848	579 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	MOB1	P40484	314 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	TFG2	P41896	400 aa	Predicted RBP	6.2	□□□□□ -1.42
ATG12	YBR217W	YJR054W	P47114	497 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	HFM1	P51979	1187 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	SLG1	P54867	378 aa		6.2	□□□□□ -1.42
ATG12	YBR217W	MZM1	Q03429	123 aa	Predicted RBP	6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms