RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	DYS1	P38791	387 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	CCT4	P39078	528 aa	Known RBP	5.75	□□□□□ -1.49
UBC4	YBR082C	SPC72	P39723	622 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	AFG3	P39925	761 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	ALD5	P40047	520 aa	Known RBP	5.75	□□□□□ -1.49
UBC4	YBR082C	KAP123	P40069	1113 aa	Known RBP	5.75	□□□□□ -1.49
UBC4	YBR082C	MAD1	P40957	749 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	AZR1	P50080	613 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	VPS62	P53285	467 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	BTN2	P53286	410 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	ALG11	P53954	548 aa	Known RBP	5.75	□□□□□ -1.49
UBC4	YBR082C	PPM1	Q04081	328 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	DOT1	Q04089	582 aa	Known RBP	5.75	□□□□□ -1.49
UBC4	YBR082C	YLR455W	Q06188	304 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	ATG23	Q06671	453 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	ZRT2	Q12436	422 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	AI5_BETA	Q9ZZX0	354 aa		5.75	□□□□□ -1.49
UBC4	YBR082C	ADE4	P04046	510 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	GAL10	P04397	699 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	RPS3	P05750	240 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	RPO26	P20435	155 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	ADE2	P21264	571 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	RNR1	P21524	888 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	SPT5	P27692	1063 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	EFB1	P32471	206 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	CNS1	P33313	385 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	DRE2	P36152	348 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	HIS2	P38635	335 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	INP51	P40559	946 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	AIM21	P40563	679 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	RPC17	P47076	161 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	ISM1	P48526	1002 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	ALT2	P52892	507 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	ALT1	P52893	592 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	YGR111W	P53265	400 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	YNL134C	P53912	376 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	MUK1	Q02866	612 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	DIG1	Q03063	452 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	POB3	Q04636	552 aa	Known RBP	5.74	□□□□□ -1.49
UBC4	YBR082C	ECM3	Q99252	613 aa		5.74	□□□□□ -1.49
UBC4	YBR082C	COX4	P04037	155 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	YER152C	P10356	443 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	DBF4	P32325	704 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	GYP6	P32806	458 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	LTV1	P34078	463 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	BCH2	P36122	765 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	UIP5	P36137	443 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	PTC4	P38089	393 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	LDH1	P38139	375 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	NCL1	P38205	684 aa	Known RBP	5.73	□□□□□ -1.49
UBC4	YBR082C	RRT2	P38332	387 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	RCK2	P38623	610 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	CBR1	P38626	284 aa	Known RBP	5.73	□□□□□ -1.49
UBC4	YBR082C	TDA3	P38758	523 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	YHR054C	P38780	354 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	SAH1	P39954	449 aa	Known RBP	5.73	□□□□□ -1.49
UBC4	YBR082C	ULI1	P43604	169 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	URH1	Q04179	340 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	YDR222W	Q04925	415 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	PUS1	Q12211	544 aa	Known RBP	5.73	□□□□□ -1.49
UBC4	YBR082C	SPO21	Q12411	609 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	PCD1	Q12524	340 aa		5.73	□□□□□ -1.49
UBC4	YBR082C	YLR462W	O13556	202 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	FUB1	P25659	250 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	RPT1	P33299	467 aa	Known RBP	5.72	□□□□□ -1.49
UBC4	YBR082C	TBS1	P38114	1094 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	OLA1	P38219	394 aa	Known RBP	5.72	□□□□□ -1.49
UBC4	YBR082C	YHL049C	P38722	271 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	GEM1	P39722	662 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	YEL075C	P39972	122 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	LCP5	P40079	357 aa	Predicted RBP	5.72	□□□□□ -1.49
UBC4	YBR082C	YER186C	P40101	306 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	YER189W	P40104	122 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	RRD1	P40454	393 aa	Known RBP	5.72	□□□□□ -1.49
UBC4	YBR082C	YFL064C	P43540	174 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	PHO86	P46956	311 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
UBC4	YBR082C	BRO1	P48582	844 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	GCV2	P49095	1034 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	HOP2	P53187	214 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
UBC4	YBR082C	YBL111C	Q3E7Y5	667 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	LAA1	P39526	2014 aa		5.72	□□□□□ -1.49
UBC4	YBR082C	CDC8	P00572	216 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	HEM1	P09950	548 aa	Predicted RBP	5.71	□□□□□ -1.5
UBC4	YBR082C	AVT3	P36062	692 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	NOP4	P37838	685 aa	Known RBP	5.71	□□□□□ -1.5
UBC4	YBR082C	YAP1801	P38856	637 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	TVP23	P38962	199 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	YGL036W	P53185	909 aa	Predicted RBP	5.71	□□□□□ -1.5
UBC4	YBR082C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
UBC4	YBR082C	GPD1	Q00055	391 aa	Known RBP	5.71	□□□□□ -1.5
UBC4	YBR082C	MZM1	Q03429	123 aa	Predicted RBP	5.71	□□□□□ -1.5
UBC4	YBR082C	SNU56	Q03782	492 aa	Known RBP	5.71	□□□□□ -1.5
UBC4	YBR082C	ATG16	Q03818	150 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	GYL1	Q04322	720 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	VTI1	Q04338	217 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	ERV41	Q04651	352 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	ECI1	Q05871	280 aa		5.71	□□□□□ -1.5
UBC4	YBR082C	CDD1	Q06549	142 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms