RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	YIL108W	P40483	696 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	NOP2	P40991	618 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	GZF3	P42944	551 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	YOR378W	Q08902	515 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	SLX4	Q12098	748 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	TMA7	Q3E764	64 aa	Known RBP	2.83	□□□□□ -1.96
NCL1	YBL024W	Q0142	Q9ZZW4	58 aa		2.83	□□□□□ -1.96
NCL1	YBL024W	PRC1	P00729	532 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	CAD1	P24813	409 aa	Known RBP	2.82	□□□□□ -1.96
NCL1	YBL024W	SED4	P25365	1065 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	CCT5	P40413	562 aa	Known RBP	2.82	□□□□□ -1.96
NCL1	YBL024W	DUG1	P43616	481 aa	Known RBP	2.82	□□□□□ -1.96
NCL1	YBL024W	MNN11	P46985	422 aa	Known RBP	2.82	□□□□□ -1.96
NCL1	YBL024W	YGR153W	P48238	217 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	EXG2	P52911	562 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	NPY1	P53164	384 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	YNL034W	P53963	612 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	YNL018C	P53976	612 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	ECM9	Q02202	377 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	THI21	Q08975	551 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	YLR149C	Q99296	730 aa		2.82	□□□□□ -1.96
NCL1	YBL024W	FBP1	P09201	348 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	TDA3	P38758	523 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	PMC1	P38929	1173 aa	Predicted RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	GPP2	P40106	250 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	URM1	P40554	99 aa	Predicted RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	RET2	P43621	546 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	NIT2	P47016	307 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	WHI4	Q07655	649 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	ENB1	Q08299	606 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	MPD2	Q99316	277 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	HRR25	P29295	494 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	HIR1	P32479	840 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	MNN4	P36044	1178 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	HXT6	P39003	570 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	HXT7	P39004	570 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	BNA2	P47125	453 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	ZIP2	P53061	704 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	NCS6	P53088	359 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	PUS2	P53167	370 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	SUN4	P53616	420 aa		2.81	□□□□□ -1.96
NCL1	YBL024W	DUS1	P53759	423 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	RPN7	Q06103	429 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	RPS21B	Q3E754	87 aa	Known RBP	2.81	□□□□□ -1.96
NCL1	YBL024W	RPS21A	P0C0V8	87 aa	Known RBP	2.8	□□□□□ -1.96
NCL1	YBL024W	AEP2	P22136	580 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	DEF1	P35732	738 aa	Known RBP	2.8	□□□□□ -1.96
NCL1	YBL024W	PEA2	P40091	420 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	YFL052W	P43551	465 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	DAS1	P47005	663 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	ARP4	P80428	489 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	UPC2	Q12151	913 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	DID4	P36108	232 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	YKR018C	P36114	725 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	MSS4	P38994	779 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	DCS2	Q12123	353 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	RMP1	Q12530	201 aa		2.8	□□□□□ -1.96
NCL1	YBL024W	ATP4	P05626	244 aa		2.79	□□□□□ -1.96
NCL1	YBL024W	SST2	P11972	698 aa	Known RBP	2.79	□□□□□ -1.96
NCL1	YBL024W	KAR4	P25583	335 aa		2.79	□□□□□ -1.96
NCL1	YBL024W	SER1	P33330	395 aa	Known RBP	2.79	□□□□□ -1.96
NCL1	YBL024W	BIT2	P38346	545 aa		2.79	□□□□□ -1.96
NCL1	YBL024W	ASM4	Q05166	528 aa		2.79	□□□□□ -1.96
NCL1	YBL024W	PIF1	P07271	859 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	HEM12	P32347	362 aa	Predicted RBP	2.78	□□□□□ -1.96
NCL1	YBL024W	OAF3	P36023	863 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	FAT1	P38225	669 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	CTF8	P38877	133 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	SDP1	P40479	209 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	SSY5	P47002	699 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	PCL10	P53124	433 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	KIN4	Q01919	800 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	LEE1	Q02799	301 aa	Known RBP	2.78	□□□□□ -1.96
NCL1	YBL024W	YHM2	Q04013	314 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	HFI1	Q12060	488 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	NYV1	Q12255	253 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	GPR1	Q12361	961 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	EFT1	P32324	842 aa	Known RBP	2.78	□□□□□ -1.96
NCL1	YBL024W	YHR078W	P38799	552 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	CTF4	Q01454	927 aa		2.78	□□□□□ -1.96
NCL1	YBL024W	GAL1	P04385	528 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	YEF3	P16521	1044 aa	Known RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	COX11	P19516	300 aa	Known RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	STE14	P32584	239 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	MIP6	P38760	659 aa	Known RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	SSZ1	P38788	538 aa	Known RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	SAK1	P38990	1142 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	YJR039W	P47107	1121 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	BRE5	P53741	515 aa	Known RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	MET14	Q02196	202 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	SKY1	Q03656	742 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	PHM6	Q05637	104 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	ECM38	Q05902	660 aa	Predicted RBP	2.77	□□□□□ -1.97
NCL1	YBL024W	YPR027C	Q12079	277 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	SWM1	Q12379	170 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	APM4	Q99186	491 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	KAR1	P11927	433 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	ATP12	P22135	325 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	SEC65	P29478	273 aa		2.77	□□□□□ -1.97
NCL1	YBL024W	NIC96	P34077	839 aa		2.77	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms