RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PDRG1Q9NUG6 133 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 MYH3P11055 1940 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZSCAN22P10073 491 aaPredicted RBP12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 HELLSQ9NRZ9 838 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TFCP2Q12800 502 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 BCL9O00512 1426 aa12.9□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CSF1RP07333 972 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 LAMB2P55268 1798 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 KBTBD3Q8NAB2 608 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PDLIM2Q96JY6 352 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 MAP7D2Q96T17 732 aa12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ADCK5Q3MIX3 580 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.88□□□□□ -0.351e-323■■■□□ 14.8
SENP3-EIF4A1-201ENST00000614237 V9GYY5 206 aaPredicted RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 STX6O43752 255 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ADCY5O95622 1261 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 EYA2O00167 538 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 FSD1Q9BTV5 496 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 GIMAP6Q6P9H5 292 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 NWD2Q9ULI1 1742 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 MYH7P12883 1935 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 SYT1P21579 422 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.353e-6■■■□□ 15.3
SENP3-EIF4A1-201ENST00000614237 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ERICH4A6NGS2 130 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 F13A1P00488 732 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 NAA30Q147X3 362 aaPredicted RBP12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CAMK4Q16566 473 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 AK7Q96M32 723 aa12.87□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 NUP98P52948 1817 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ELP1O95163 1332 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PHF14O94880 888 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 KLHDC4Q8TBB5 520 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CCDC94Q9BW85 323 aaPredicted RBP12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CPA1P15085 419 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ME3Q16798 604 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PDCP20941 246 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ZBTB38Q8NAP3 1195 aaPredicted RBP12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CDCA7Q9BWT1 371 aaPredicted RBP12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 SIL1Q9H173 461 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 CNPY2Q9Y2B0 182 aa12.85□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ZNF500O60304 480 aaPredicted RBP12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 A1BGP04217 495 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 UBE2HP62256 183 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 ZNF589Q86UQ0 364 aaPredicted RBP12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 USP48Q86UV5 1035 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 FERMT3Q86UX7 667 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 C16orf45Q96MC5 204 aaPredicted RBP12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 LLPHQ9BRT6 129 aaKnown RBP12.84□□□□□ -0.35
SENP3-EIF4A1-201ENST00000614237 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms