RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 CHMLP26374 656 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 IGHMBP2P38935 993 aaKnown RBP7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PHKA1P46020 1223 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 OLFM4Q6UX06 510 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 DDX46Q7L014 1031 aaKnown RBP7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ANKRD18AQ8IVF6 992 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 MPHOSPH8Q99549 860 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GPR108Q9NPR9 543 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 TTC41PQ6P2S7 1318 aa7.52□□□□□ -1.21
RNU4ATAC-201ENST00000580972 BCORQ6W2J9 1755 aa7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ATP5JP18859 108 aa7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ST5P78524 1137 aa7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GPATCH3Q96I76 525 aa7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 FAM227BQ96M60 508 aa7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CDC5LQ99459 802 aaKnown RBP7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 MINPP1Q9UNW1 487 aa7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 TNRC6CQ9HCJ0 1690 aaKnown RBP7.51□□□□□ -1.21
RNU4ATAC-201ENST00000580972 A0A0D9SFI3 127 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GOLIM4O00461 696 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ERC2O15083 957 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PDE8BO95263 885 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ZBTB7AO95365 584 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CHRNA5P30532 468 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ZAP70P43403 619 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 BCAMP50895 628 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 RPS8P62241 208 aaKnown RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 NMIQ13287 307 aaPredicted RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GRAPQ13588 217 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PUM3Q15397 648 aaKnown RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CRY2Q49AN0 593 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 TTC39AQ5SRH9 613 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 NLGN1Q8N2Q7 840 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 FLAD1Q8NFF5 587 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GRAPLQ8TC17 118 aaPredicted RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 TBC1D32Q96NH3 1257 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 HAUS7Q99871 368 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ESYT1Q9BSJ8 1104 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PIH1D3Q9NQM4 214 aaKnown RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 BSDC1Q9NW68 430 aaPredicted RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PARP3Q9Y6F1 533 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 MROH5Q6ZUA9 1318 aa7.5□□□□□ -1.21
RNU4ATAC-201ENST00000580972 C4AP0C0L4 1744 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 KAT6BQ8WYB5 2073 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PSDA5PKW4 1024 aaPredicted RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 IFIT1P09914 478 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 HSP90B1P14625 803 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 MCAMP43121 646 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GYG1P46976 350 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 SLC4A3P48751 1232 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GPSM2P81274 684 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 R3HDM1Q15032 1099 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 GORABQ5T7V8 394 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CCDC102BQ68D86 513 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CCDC129Q6ZRS4 1044 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 TXNRD3Q86VQ6 643 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CNTROBQ8N137 903 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 LPIN2Q92539 896 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 RPGRQ92834 1020 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 SEC62Q99442 399 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 FSD1Q9BTV5 496 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ZNF219Q9P2Y4 722 aaPredicted RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 AKAP2Q9Y2D5 859 aa7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 AFDNP55196 1824 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC-201ENST00000580972 KLRG2A4D1S0 409 aaPredicted RBP7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 SLC5A1P13866 664 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 FKBP4Q02790 459 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PTH1RQ03431 593 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 RASGRF1Q13972 1273 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 COL24A1Q17RW2 1714 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CWC27Q6UX04 472 aaKnown RBP7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ZNF589Q86UQ0 364 aaPredicted RBP7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 EVI5LQ96CN4 794 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 KIF2CQ99661 725 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 C22orf23Q9BZE7 217 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PAG1Q9NWQ8 432 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 HMG20BQ9P0W2 317 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 WWC3Q9ULE0 1092 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 PALD1Q9ULE6 856 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 JAG2Q9Y219 1238 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ATF5Q9Y2D1 282 aaPredicted RBP7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 COL1A1P02452 1464 aaPredicted RBP7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 IRS2Q9Y4H2 1338 aa7.48□□□□□ -1.21
RNU4ATAC-201ENST00000580972 M0R2C6 588 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 SGSM2O43147 1006 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CYP2E1P05181 493 aaPredicted RBP7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 HOXA10P31260 410 aaPredicted RBP7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 CCDC158Q5M9N0 1113 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ILDR2Q71H61 639 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 RBM17Q96I25 401 aaKnown RBP7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 BRIP1Q9BX63 1249 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 USP26Q9BXU7 913 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 LSG1Q9H089 658 aaKnown RBP7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
RNU4ATAC-201ENST00000580972 DIAPH3Q9NSV4 1193 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms