RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
TRAV33-201ENST00000557514 SH3TC1Q8TE82 1336 aa13.78□□□□□ -0.2
TRAV33-201ENST00000557514 UBE2Q2LH0YL09 131 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 GPSM2P81274 684 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 PDIA6Q15084 440 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 KDM3BQ7LBC6 1761 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 OTOP1Q7RTM1 612 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 NECTIN2Q92692 538 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 CELF1Q92879 486 aaKnown RBP13.77□□□□□ -0.21
TRAV33-201ENST00000557514 ARMC5Q96C12 935 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 CFAP53Q96M91 514 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 EYA3Q99504 573 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 TRIM17Q9Y577 477 aa13.77□□□□□ -0.21
TRAV33-201ENST00000557514 KIAA0100Q14667 2235 aaKnown RBP13.76□□□□□ -0.21
TRAV33-201ENST00000557514 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
TRAV33-201ENST00000557514 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
TRAV33-201ENST00000557514 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
TRAV33-201ENST00000557514 AGBL3Q8NEM8 1001 aa13.76□□□□□ -0.21
TRAV33-201ENST00000557514 TBC1D16Q8TBP0 767 aa13.76□□□□□ -0.21
TRAV33-201ENST00000557514 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
TRAV33-201ENST00000557514 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
TRAV33-201ENST00000557514 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
TRAV33-201ENST00000557514 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
TRAV33-201ENST00000557514 GMLQ99445 158 aa13.75□□□□□ -0.21
TRAV33-201ENST00000557514 THUMPD2Q9BTF0 503 aaKnown RBP13.75□□□□□ -0.21
TRAV33-201ENST00000557514 MYOZ2Q9NPC6 264 aa13.75□□□□□ -0.21
TRAV33-201ENST00000557514 TRMT112Q9UI30 125 aaKnown RBP13.75□□□□□ -0.21
TRAV33-201ENST00000557514 ANKRD36CQ5JPF3 1778 aa13.75□□□□□ -0.21
TRAV33-201ENST00000557514 COL4A1P02462 1669 aa13.75□□□□□ -0.21
TRAV33-201ENST00000557514 DDX60Q8IY21 1712 aaKnown RBP13.74□□□□□ -0.21
TRAV33-201ENST00000557514 ALDH1A1P00352 501 aa13.74□□□□□ -0.21
TRAV33-201ENST00000557514 EN2P19622 333 aaPredicted RBP13.74□□□□□ -0.21
TRAV33-201ENST00000557514 SF3B3Q15393 1217 aaKnown RBP13.74□□□□□ -0.21
TRAV33-201ENST00000557514 LAMB2P55268 1798 aa13.73□□□□□ -0.21
TRAV33-201ENST00000557514 DLL1O00548 723 aa13.73□□□□□ -0.21
TRAV33-201ENST00000557514 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
TRAV33-201ENST00000557514 SCAF8Q9UPN6 1271 aaKnown RBP13.73□□□□□ -0.21
TRAV33-201ENST00000557514 ANXA1P04083 346 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 USP17L8P0C7I0 530 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 TCIRG1Q13488 830 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
TRAV33-201ENST00000557514 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
TRAV33-201ENST00000557514 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
TRAV33-201ENST00000557514 RBBP6Q7Z6E9 1792 aaKnown RBP13.72□□□□□ -0.21
TRAV33-201ENST00000557514 SCN9AQ15858 1988 aa13.71□□□□□ -0.21
TRAV33-201ENST00000557514 PTPN12Q05209 780 aaKnown RBP13.71□□□□□ -0.21
TRAV33-201ENST00000557514 UFL1O94874 794 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 NF2P35240 595 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
TRAV33-201ENST00000557514 LDLRAD1Q5T700 205 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 ZNF333Q96JL9 665 aa13.7□□□□□ -0.22
TRAV33-201ENST00000557514 POLR2AP24928 1970 aaKnown RBP13.69□□□□□ -0.22
TRAV33-201ENST00000557514 MANSC4A6NHS7 340 aaPredicted RBP13.69□□□□□ -0.22
TRAV33-201ENST00000557514 H0YGN5 161 aa13.69□□□□□ -0.22
TRAV33-201ENST00000557514 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
TRAV33-201ENST00000557514 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
TRAV33-201ENST00000557514 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAV33-201ENST00000557514 EIF2S2P20042 333 aaKnown RBP13.68□□□□□ -0.22
TRAV33-201ENST00000557514 RPS8P62241 208 aaKnown RBP13.68□□□□□ -0.22
TRAV33-201ENST00000557514 ARMC9Q7Z3E5 817 aa13.68□□□□□ -0.22
TRAV33-201ENST00000557514 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
TRAV33-201ENST00000557514 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 WNT10BO00744 389 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 INHBEP58166 350 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 CAP1Q01518 475 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 CD99L2Q8TCZ2 262 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 ZNF428Q96B54 188 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 FAM89AQ96GI7 184 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
TRAV33-201ENST00000557514 G3V3G9 751 aa13.66□□□□□ -0.22
TRAV33-201ENST00000557514 ZBTB48P10074 688 aaPredicted RBP13.66□□□□□ -0.22
TRAV33-201ENST00000557514 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
TRAV33-201ENST00000557514 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
TRAV33-201ENST00000557514 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
TRAV33-201ENST00000557514 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
TRAV33-201ENST00000557514 ISCA1Q9BUE6 129 aa13.66□□□□□ -0.22
TRAV33-201ENST00000557514 TMEM106CQ9BVX2 250 aa13.66□□□□□ -0.22
TRAV33-201ENST00000557514 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
TRAV33-201ENST00000557514 CRHR2Q13324 411 aa13.65□□□□□ -0.22
TRAV33-201ENST00000557514 NFE2L2Q16236 605 aa13.65□□□□□ -0.22
TRAV33-201ENST00000557514 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
TRAV33-201ENST00000557514 COL1A1P02452 1464 aaPredicted RBP13.65□□□□□ -0.22
TRAV33-201ENST00000557514 TAF1P21675 1872 aa13.65□□□□□ -0.22
TRAV33-201ENST00000557514 SSC5DA1L4H1 1573 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
TRAV33-201ENST00000557514 SASH1O94885 1247 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 PRKG1Q13976 671 aa13.64□□□□□ -0.23
TRAV33-201ENST00000557514 MAP3K11Q16584 847 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms