RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
TRAV33-201ENST00000557514 ABCC9O60706 1549 aa25.11■■□□□ 1.61
TRAV33-201ENST00000557514 CCDC180Q9P1Z9 1646 aa24.49■■□□□ 1.51
TRAV33-201ENST00000557514 DNAJC5BQ9UF47 199 aa24.11■■□□□ 1.45
TRAV33-201ENST00000557514 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
TRAV33-201ENST00000557514 NACADO15069 1562 aa23.34■■□□□ 1.33
TRAV33-201ENST00000557514 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRAV33-201ENST00000557514 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
TRAV33-201ENST00000557514 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
TRAV33-201ENST00000557514 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
TRAV33-201ENST00000557514 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
TRAV33-201ENST00000557514 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
TRAV33-201ENST00000557514 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
TRAV33-201ENST00000557514 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
TRAV33-201ENST00000557514 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
TRAV33-201ENST00000557514 EIF4G1Q04637 1599 aaKnown RBP22.47■■□□□ 1.19
TRAV33-201ENST00000557514 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
TRAV33-201ENST00000557514 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
TRAV33-201ENST00000557514 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
TRAV33-201ENST00000557514 CUX2O14529 1486 aa21.95■■□□□ 1.1
TRAV33-201ENST00000557514 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
TRAV33-201ENST00000557514 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
TRAV33-201ENST00000557514 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
TRAV33-201ENST00000557514 NESP48681 1621 aa21.39■■□□□ 1.01
TRAV33-201ENST00000557514 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
TRAV33-201ENST00000557514 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
TRAV33-201ENST00000557514 SMARCA2P51531 1590 aa21.31■■□□□ 1
TRAV33-201ENST00000557514 TRIM41Q8WV44 630 aa21.27■■□□□ 1
TRAV33-201ENST00000557514 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
TRAV33-201ENST00000557514 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
TRAV33-201ENST00000557514 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
TRAV33-201ENST00000557514 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
TRAV33-201ENST00000557514 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
TRAV33-201ENST00000557514 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
TRAV33-201ENST00000557514 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
TRAV33-201ENST00000557514 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
TRAV33-201ENST00000557514 WDR62O43379 1518 aa20.93■□□□□ 0.94
TRAV33-201ENST00000557514 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
TRAV33-201ENST00000557514 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
TRAV33-201ENST00000557514 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
TRAV33-201ENST00000557514 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
TRAV33-201ENST00000557514 FANCD2Q9BXW9 1451 aa20.64■□□□□ 0.89
TRAV33-201ENST00000557514 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
TRAV33-201ENST00000557514 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
TRAV33-201ENST00000557514 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
TRAV33-201ENST00000557514 CFTRP13569 1480 aa20.55■□□□□ 0.88
TRAV33-201ENST00000557514 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.87
TRAV33-201ENST00000557514 ARHGEF11O15085 1522 aa20.49■□□□□ 0.87
TRAV33-201ENST00000557514 WIZO95785 1651 aa20.45■□□□□ 0.86
TRAV33-201ENST00000557514 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
TRAV33-201ENST00000557514 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
TRAV33-201ENST00000557514 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
TRAV33-201ENST00000557514 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
TRAV33-201ENST00000557514 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
TRAV33-201ENST00000557514 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
TRAV33-201ENST00000557514 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
TRAV33-201ENST00000557514 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
TRAV33-201ENST00000557514 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
TRAV33-201ENST00000557514 PRDM2Q13029 1718 aa20.08■□□□□ 0.81
TRAV33-201ENST00000557514 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
TRAV33-201ENST00000557514 ABCC8Q09428 1581 aa20.08■□□□□ 0.8
TRAV33-201ENST00000557514 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.8
TRAV33-201ENST00000557514 CHD1O14646 1710 aa20.05■□□□□ 0.8
TRAV33-201ENST00000557514 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
TRAV33-201ENST00000557514 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
TRAV33-201ENST00000557514 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
TRAV33-201ENST00000557514 FBLN2P98095 1184 aa19.99■□□□□ 0.79
TRAV33-201ENST00000557514 POLA1P09884 1462 aaPredicted RBP19.96■□□□□ 0.79
TRAV33-201ENST00000557514 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
TRAV33-201ENST00000557514 SNAPC4Q5SXM2 1469 aa19.88■□□□□ 0.77
TRAV33-201ENST00000557514 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
TRAV33-201ENST00000557514 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
TRAV33-201ENST00000557514 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
TRAV33-201ENST00000557514 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
TRAV33-201ENST00000557514 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
TRAV33-201ENST00000557514 SOGA1O94964 1423 aa19.8■□□□□ 0.76
TRAV33-201ENST00000557514 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
TRAV33-201ENST00000557514 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
TRAV33-201ENST00000557514 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
TRAV33-201ENST00000557514 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
TRAV33-201ENST00000557514 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
TRAV33-201ENST00000557514 CUX1P39880 1505 aa19.61■□□□□ 0.73
TRAV33-201ENST00000557514 ERCC6L2Q5T890 1561 aa19.56■□□□□ 0.72
TRAV33-201ENST00000557514 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
TRAV33-201ENST00000557514 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
TRAV33-201ENST00000557514 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
TRAV33-201ENST00000557514 NUP160Q12769 1436 aa19.49■□□□□ 0.71
TRAV33-201ENST00000557514 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
TRAV33-201ENST00000557514 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
TRAV33-201ENST00000557514 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
TRAV33-201ENST00000557514 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
TRAV33-201ENST00000557514 KIF13AQ9H1H9 1805 aa19.37■□□□□ 0.69
TRAV33-201ENST00000557514 ILDR1Q86SU0 546 aaPredicted RBP19.35■□□□□ 0.69
TRAV33-201ENST00000557514 ABCC10Q5T3U5 1492 aa19.35■□□□□ 0.69
TRAV33-201ENST00000557514 KDM4FA0A1W2PPD8 638 aa19.32■□□□□ 0.68
TRAV33-201ENST00000557514 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
TRAV33-201ENST00000557514 PRG4Q92954 1404 aaPredicted RBP19.28■□□□□ 0.68
TRAV33-201ENST00000557514 FAM69CQ0P6D2 419 aa19.28■□□□□ 0.68
TRAV33-201ENST00000557514 MAPKBP1O60336 1514 aa19.28■□□□□ 0.68
TRAV33-201ENST00000557514 WRNQ14191 1432 aaPredicted RBP eCLIP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms