RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 LINC01387J3KSC0 135 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 MMP20O60882 483 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 EGFRP00533 1210 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 GHRHP01286 108 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 CD68P34810 354 aaPredicted RBP4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 TXNDC11Q6PKC3 985 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 POU5F2Q8N7G0 328 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 DCAF11Q8TEB1 546 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 COL26A1Q96A83 441 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 MYRFLQ96LU7 910 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 CEP41Q9BYV8 373 aa4.12□□□□□ -1.75
RNU6-239P-201ENST00000390990 POM121CA8CG34 1229 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 ATP9BO43861 1147 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 XYLBO75191 536 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 PSAPP07602 524 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 SEC13P55735 322 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 UVSSAQ2YD98 709 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 ADAMTSL4Q6UY14 1074 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 NFXL1Q6ZNB6 911 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 CLEC10AQ8IUN9 316 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 FAM20CQ8IXL6 584 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 HINFPQ9BQA5 517 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 FAM83CQ9BQN1 747 aa4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 QTRT2Q9H974 415 aaKnown RBP4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 RBM19Q9Y4C8 960 aaKnown RBP4.11□□□□□ -1.75
RNU6-239P-201ENST00000390990 WDR64B1ANS9 1081 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 DDX3YO15523 660 aaKnown RBP4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 BMP3P12645 472 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 HOXD8P13378 290 aaPredicted RBP4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 CDC25BP30305 580 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 COL19A1Q14993 1142 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 CBLL1Q75N03 491 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 CMTR1Q8N1G2 835 aaKnown RBP4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 POM121Q96HA1 1249 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 CARD10Q9BWT7 1032 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 MUC3BQ9H195 1237 aa4.1□□□□□ -1.75
RNU6-239P-201ENST00000390990 IGFBP4P22692 258 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 SOX18P35713 384 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 C11orf91Q3C1V1 193 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 HDGFL1Q5TGJ6 251 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 BEND4Q6ZU67 534 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 RGL4Q8IZJ4 473 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 UBASH3BQ8TF42 649 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 FOXD4L4Q8WXT5 416 aaPredicted RBP4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 LACRTQ9GZZ8 138 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 RBSNQ9H1K0 784 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 KCNF1Q9H3M0 494 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 KCNMB2Q9Y691 235 aa4.09□□□□□ -1.75
RNU6-239P-201ENST00000390990 ADAM11O75078 769 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 PREPP48147 710 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 ATP11AP98196 1134 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 DUOXA2Q1HG44 320 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 COL13A1Q5TAT6 717 aaPredicted RBP4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 CACTIN-AS1Q8N1I8 211 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 ASIC4Q96FT7 647 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 MFSD14AQ96MC6 490 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 PIM2Q9P1W9 311 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 CCDC39Q9UFE4 941 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 LRFN2Q9ULH4 789 aa4.08□□□□□ -1.76
RNU6-239P-201ENST00000390990 FSCN2O14926 492 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 ITGB5P18084 799 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 DPYDQ12882 1025 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 MSMPQ1L6U9 139 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 CEP135Q66GS9 1140 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 TREML1Q86YW5 311 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 SHISA5Q8N114 240 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 KLHDC7BQ96G42 594 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 MYO19Q96H55 970 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 KRTAP4-5Q9BYR2 181 aa4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 ANGEL1Q9UNK9 670 aaKnown RBP4.07□□□□□ -1.76
RNU6-239P-201ENST00000390990 F13BP05160 661 aa4.06□□□□□ -1.76
RNU6-239P-201ENST00000390990 EPHA1P21709 976 aa4.06□□□□□ -1.76
RNU6-239P-201ENST00000390990 CDC27P30260 824 aa4.06□□□□□ -1.76
RNU6-239P-201ENST00000390990 CRTC2Q53ET0 693 aaPredicted RBP4.06□□□□□ -1.76
RNU6-239P-201ENST00000390990 BCANQ96GW7 911 aa4.06□□□□□ -1.76
RNU6-239P-201ENST00000390990 SH2B1Q9NRF2 756 aaPredicted RBP4.06□□□□□ -1.76
RNU6-239P-201ENST00000390990 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 SART1O43290 800 aaKnown RBP4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 PRNPP04156 253 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 FOSL1P15407 271 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 PTK7Q13308 1070 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 TRIP4Q15650 581 aaPredicted RBP4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 FBLN7Q53RD9 439 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 ZNF648Q5T619 568 aaPredicted RBP4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 WWC1Q8IX03 1113 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 FBXL6Q8N531 539 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 KLHL23Q8NBE8 558 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 OR13H1Q8NG92 308 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 RASSF4Q9H2L5 321 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 ATG3Q9NT62 314 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 TFIP11Q9UBB9 837 aaKnown RBP4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 LEMD3Q9Y2U8 911 aa4.05□□□□□ -1.76
RNU6-239P-201ENST00000390990 JUNBP17275 347 aaPredicted RBP4.04□□□□□ -1.76
RNU6-239P-201ENST00000390990 WEE1P30291 646 aa4.04□□□□□ -1.76
RNU6-239P-201ENST00000390990 ZNF124Q15973 351 aa4.04□□□□□ -1.76
RNU6-239P-201ENST00000390990 ANKRD34AQ69YU3 496 aa4.04□□□□□ -1.76
RNU6-239P-201ENST00000390990 SPOCD1Q6ZMY3 1216 aa4.04□□□□□ -1.76
RNU6-239P-201ENST00000390990 NLRP13Q86W25 1043 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms