RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RRAGDQ9NQL2 400 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-201ENST00000334136 LTN1O94822 1766 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 RNF123Q5XPI4 1314 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 H3BQV1 296 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 IFFO2Q5TF58 517 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 C2CD5Q86YS7 1000 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 BICD2Q8TD16 824 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 COL14A1Q05707 1796 aaKnown RBP13.98□□□□□ -0.17
HDAC6-201ENST00000334136 BCL9O00512 1426 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 ZBTB7AO95365 584 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 UQCRFS1P1P0C7P4 283 aa13.98□□□□□ -0.17
HDAC6-201ENST00000334136 PLEKHG2Q9H7P9 1386 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 ERFEQ4G0M1 354 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 TSPY26PQ9H489 355 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 MAP3K12Q12852 859 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 SF3A1Q15459 793 aaKnown RBP13.97□□□□□ -0.17
HDAC6-201ENST00000334136 DZIP1Q86YF9 867 aaKnown RBP13.97□□□□□ -0.17
HDAC6-201ENST00000334136 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-201ENST00000334136 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 EYA3Q99504 573 aa13.97□□□□□ -0.17
HDAC6-201ENST00000334136 IGKV5-2P06315 115 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 SLIT2O94813 1529 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 GOLIM4O00461 696 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 TIMM10P62072 90 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 NUCB1Q02818 461 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.17
HDAC6-201ENST00000334136 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 CNTNAP4Q9C0A0 1308 aa13.96□□□□□ -0.17
HDAC6-201ENST00000334136 CLCN1P35523 988 aa13.96□□□□□ -0.18
HDAC6-201ENST00000334136 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.18
HDAC6-201ENST00000334136 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.18
HDAC6-201ENST00000334136 UFL1O94874 794 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 FOSBP53539 338 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 SMC5Q8IY18 1101 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 CCAR2Q8N163 923 aaKnown RBP13.95□□□□□ -0.18
HDAC6-201ENST00000334136 GREM2Q9H772 168 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 SLC15A2Q16348 729 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 ZNF804AQ7Z570 1209 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 JDP2Q8WYK2 163 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 CNKSR1Q969H4 720 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
HDAC6-201ENST00000334136 TAF5LO75529 589 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 DPP8Q6V1X1 898 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-201ENST00000334136 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
HDAC6-201ENST00000334136 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-201ENST00000334136 RALYLQ86SE5 291 aaKnown RBP13.94□□□□□ -0.18
HDAC6-201ENST00000334136 GGA1Q9UJY5 639 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 BCS1LQ9Y276 419 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 NFIXQ14938 502 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 SSH3Q8TE77 659 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 TMOD2Q9NZR1 351 aa13.94□□□□□ -0.18
HDAC6-201ENST00000334136 H7C1W4 665 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 PLSCR1O15162 318 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 A0A1B0GUL7 405 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 TTF1Q15361 905 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-201ENST00000334136 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
HDAC6-201ENST00000334136 PDE1AP54750 535 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 UPF3BQ9BZI7 483 aaKnown RBP13.93□□□□□ -0.18
HDAC6-201ENST00000334136 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 RAD21O60216 631 aa13.93□□□□□ -0.18
HDAC6-201ENST00000334136 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
HDAC6-201ENST00000334136 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-201ENST00000334136 TRIM28Q13263 835 aaKnown RBP13.92□□□□□ -0.18
HDAC6-201ENST00000334136 PDIA6Q15084 440 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 SPTY2D1Q68D10 685 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-201ENST00000334136 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-201ENST00000334136 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
HDAC6-201ENST00000334136 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 LDHCP07864 332 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 SLF2Q8IX21 1173 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 EVI5LQ96CN4 794 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 TPM4P67936 248 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 SYNE3Q6ZMZ3 975 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 TRIM5Q9C035 493 aa13.92□□□□□ -0.18
HDAC6-201ENST00000334136 CREBRFQ8IUR6 639 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 SEC31BQ9NQW1 1179 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 ADCY9O60503 1353 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 SLC3A2P08195 630 aaKnown RBP13.91□□□□□ -0.18
HDAC6-201ENST00000334136 HMGN5P82970 282 aaKnown RBP13.91□□□□□ -0.18
HDAC6-201ENST00000334136 TNNI3KQ59H18 835 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 FPGT-TNNI3KV9GXZ4 949 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 CARMIL3Q8ND23 1372 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 ABCC6O95255 1503 aa13.91□□□□□ -0.18
HDAC6-201ENST00000334136 TDO2P48775 406 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 DBNDD2Q9BQY9 259 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 HIBADHP31937 336 aaKnown RBP13.9□□□□□ -0.18
HDAC6-201ENST00000334136 LPIN2Q92539 896 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 GDPD2Q9HCC8 539 aa13.9□□□□□ -0.18
HDAC6-201ENST00000334136 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
HDAC6-201ENST00000334136 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
HDAC6-201ENST00000334136 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms