RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Col23a1Q8K4G2 532 aa27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Adarb2Q9JI20 745 aa27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Sh3tc1G3X9F6 1346 aa27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 GabrdP22933 449 aa27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 McamQ8R2Y2 648 aaKnown RBP27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Fbxo3Q9DC63 480 aa27.6■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Togaram1Q6A070 1776 aaKnown RBP27.59■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Cfap44E9Q5M6 1843 aa27.59■■■□□ 2.01
Upf3a-201ENSMUST00000043767 TnksQ6PFX9 1320 aa27.59■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Celf1P28659 486 aaKnown RBP27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Pde3bQ61409 1100 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Naa16Q9DBB4 864 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Col3a1P08121 1464 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Ccdc85cE9Q6B2 420 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 NpeppsQ11011 920 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Prom2Q3UUY6 835 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 HlfQ8BW74 295 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Strip1Q8C079 837 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 St5Q924W7 1134 aa27.58■■■□□ 2.01
Upf3a-201ENSMUST00000043767 Map3k15A2AQW0 1331 aa27.57■■■□□ 2
Upf3a-201ENSMUST00000043767 Speer4dL7N216 212 aa27.57■■■□□ 2
Upf3a-201ENSMUST00000043767 Prdm11A2AGX3 565 aa27.56■■■□□ 2
Upf3a-201ENSMUST00000043767 Oas2E9Q9A9 742 aa27.56■■■□□ 2
Upf3a-201ENSMUST00000043767 Gm4340L7N2C4 268 aa27.56■■■□□ 2
Upf3a-201ENSMUST00000043767 IncenpQ9WU62 880 aa27.56■■■□□ 2
Upf3a-201ENSMUST00000043767 Znfx1Q8R151 1909 aaKnown RBP27.56■■■□□ 2
Upf3a-201ENSMUST00000043767 Ppfia1B2RXQ2 1266 aa27.55■■■□□ 2
Upf3a-201ENSMUST00000043767 Mdm2P23804 489 aa27.55■■■□□ 2
Upf3a-201ENSMUST00000043767 Nlrp9aQ66X03 949 aa27.55■■■□□ 2
Upf3a-201ENSMUST00000043767 Pmfbp1Q9WVQ0 1022 aa27.55■■■□□ 2
Upf3a-201ENSMUST00000043767 Golgb1E9PVZ8 3238 aa27.54■■■□□ 2
Upf3a-201ENSMUST00000043767 Casp1P29452 402 aa27.54■■■□□ 2
Upf3a-201ENSMUST00000043767 Wdhd1P59328 1117 aa27.54■■■□□ 2
Upf3a-201ENSMUST00000043767 Ufl1Q8CCJ3 793 aaKnown RBP27.54■■■□□ 2
Upf3a-201ENSMUST00000043767 Cyp3a57D3YYZ0 503 aa27.53■■■□□ 2
Upf3a-201ENSMUST00000043767 Scn11aQ9R053 1765 aa27.53■■■□□ 2
Upf3a-201ENSMUST00000043767 Rdm1Q9CQK3 281 aa27.53■■■□□ 2
Upf3a-201ENSMUST00000043767 Ppil4Q9CXG3 492 aaKnown RBP27.53■■■□□ 2
Upf3a-201ENSMUST00000043767 Pus3Q9JI38 481 aa27.53■■■□□ 2
Upf3a-201ENSMUST00000043767 Col4a5Q63ZW6 1691 aa27.53■■■□□ 2
Upf3a-201ENSMUST00000043767 Terf2O35144 541 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Kiaa0753Q6A000 959 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Tshz3Q8CGV9 1081 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Gm10093D3YYI8 482 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Hdac1O09106 482 aaKnown RBP27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Fam160b2Q80YR2 744 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Osbpl5Q9ER64 874 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Mlh1Q9JK91 760 aa27.52■■■□□ 2
Upf3a-201ENSMUST00000043767 Setdb1O88974 1307 aa27.51■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Myo3bQ1EG27 1305 aa27.51■■□□□ 1.99
Upf3a-201ENSMUST00000043767 NfixP70257 488 aa27.5■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Sh3bp5lQ99LH9 392 aa27.5■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Catsper2A2ARP9 588 aa27.5■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Znf609Q8BZ47 1413 aa27.49■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Heg1E9Q7X6 1337 aa27.49■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Gja5Q01231 358 aa27.49■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Top1mtQ8R4U6 593 aa27.49■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Rbm33Q9CXK9 1231 aaKnown RBP27.49■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Atp6v0a2P15920 856 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Dydc2Q9D3X8 139 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Ambra1A2AH22 1300 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Rnf123Q5XPI3 1314 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 AU015836B2RUM3 263 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Prl3d1P18121 224 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Cyp2d10P24456 504 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Il15P48346 162 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Ddx11Q6AXC6 880 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Riok1Q922Q2 567 aa27.48■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Psd3Q2PFD7 1037 aa27.47■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Bmp2kQ91Z96 1138 aa27.47■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Emilin1Q99K41 1017 aa27.47■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Jakmip1Q8BVL9 626 aa27.47■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Phf14Q9D4H9 881 aa27.47■■□□□ 1.99
Upf3a-201ENSMUST00000043767 ParvgQ9ERD8 331 aa27.47■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Pram1Q6BCL1 675 aa27.46■■□□□ 1.99
Upf3a-201ENSMUST00000043767 EngaseQ8BX80 734 aa27.46■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Rad50P70388 1312 aa27.46■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Nup98Q6PFD9 1816 aaKnown RBP27.46■■□□□ 1.99
Upf3a-201ENSMUST00000043767 StrcQ8VIM6 1809 aa27.46■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Rhbdl3P58873 404 aa27.45■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Npc1l1Q6T3U4 1333 aa27.45■■□□□ 1.99
Upf3a-201ENSMUST00000043767 Kif20aP97329 887 aa27.45■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Map10Q8BJS7 891 aa27.45■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Ube3bQ9ES34 1070 aa27.45■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Pdcl3Q8BVF2 240 aa27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Rbm17Q8JZX4 405 aaKnown RBP27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 EvplQ9D952 2035 aa27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Zkscan16A2ALW2 728 aa27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Znf692Q3U381 531 aa27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Abtb2Q7TQI7 1024 aa27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Amer1Q7TS75 1132 aa27.44■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Ms4a2P20490 235 aa27.43■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Dok7Q18PE0 504 aa27.43■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Stk11ipQ3TAA7 1072 aa27.43■■□□□ 1.98
Upf3a-201ENSMUST00000043767 ErfeQ6PGN1 340 aa27.43■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Mb21d2Q8C525 428 aa27.43■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Slc14a2Q8R4T9 930 aa27.43■■□□□ 1.98
Upf3a-201ENSMUST00000043767 MecomP14404 1042 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Mcm4P49717 862 aa27.42■■□□□ 1.98
Upf3a-201ENSMUST00000043767 Sept9Q80UG5 583 aa27.42■■□□□ 1.98
Retrieved 100 of 22,080 RNA–protein pairs in 78.4 ms