RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 KCNK17Q96T54 332 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 SH3GL1Q99961 368 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 SH3GL3Q99963 347 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 ECSITQ9BQ95 431 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 POLR2J2Q9GZM3 115 aaKnown RBP10.29□□□□□ -0.76
PTPRF-211ENST00000467464 POLR2J3Q9H1A7 115 aaKnown RBP10.29□□□□□ -0.76
PTPRF-211ENST00000467464 CCDC134Q9H6E4 229 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 CMTM6Q9NX76 183 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 RIMS3Q9UJD0 308 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 BAG5Q9UL15 447 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 CMAHPQ9Y471 501 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 ATRQ13535 2644 aa10.29□□□□□ -0.76
PTPRF-211ENST00000467464 ABCA1O95477 2261 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 CHD3Q12873 2000 aaKnown RBP10.28□□□□□ -0.76
PTPRF-211ENST00000467464 FBN3Q75N90 2809 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 LOC100653049A0A140TA62 436 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 SH3PXD2BA1X283 911 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 LYNX1G3V0Z9 82 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 BLOC1S5-TXNDC5H3BN57 136 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 SYNGR3O43761 229 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 PIP5K1CO60331 668 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 LMX1BO60663 402 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 KRT34O76011 436 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 BCL10O95999 233 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 MMP7P09237 267 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-211ENST00000467464 QDPRP09417 244 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 OR8G3PP0DMU2 310 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 LYNX1P0DP58 116 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 THRBP10828 461 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 UMPSP11172 480 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 FUT1P19526 365 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 KDELR2P33947 212 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 AQP2P41181 271 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 FHL1Q13642 323 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 MAD2L1BPQ15013 274 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-211ENST00000467464 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 CYBRD1Q53TN4 286 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 ELFN2Q5R3F8 820 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 C10orf128Q5T292 105 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 DEF8Q6ZN54 512 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 PHC2Q8IXK0 858 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 OR4K5Q8NGD3 323 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 MCHR2Q969V1 340 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 SGTBQ96EQ0 304 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 TPK1Q9H3S4 243 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 MAN2C1Q9NTJ4 1040 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 MRGBPQ9NV56 204 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 ARMCX1Q9P291 453 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 FBXL3Q9UKT7 428 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 A4GNTQ9UNA3 340 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 UGT2A1Q9Y4X1 527 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 MXRA5Q9NR99 2828 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 ARFGEF3Q5TH69 2177 aa10.28□□□□□ -0.76
PTPRF-211ENST00000467464 ALPK2Q86TB3 2170 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 LOC100289279A0A1B0GTE1 492 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 LRP5LA4QPB2 252 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 NPIPB13A6NJU9 1138 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 CENPBD1B2RD01 187 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 NPIPB4C9JG80 1138 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 M0R233 179 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 TRMUO75648 421 aaKnown RBP10.27□□□□□ -0.77
PTPRF-211ENST00000467464 NCR1O76036 304 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 IGHG1P01857 330 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 ALDH3B1P43353 468 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 SEC24CP53992 1094 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 TAS2R41P59536 307 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 MYBPC1Q00872 1141 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 GUCY1A3Q02108 690 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 MAPRE2Q15555 327 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 TRIP10Q15642 601 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 MMEL1Q495T6 779 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 LRRC23Q53EV4 343 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-211ENST00000467464 FAM166AQ6J272 317 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 C8orf82Q6P1X6 216 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-211ENST00000467464 IL17RELQ6ZVW7 336 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 MICU2Q8IYU8 434 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 POU5F2Q8N7G0 328 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 ZNF540Q8NDQ6 660 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 OR2T12Q8NG77 320 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 HDAC2Q92769 488 aaKnown RBP10.27□□□□□ -0.77
PTPRF-211ENST00000467464 NABP1Q96AH0 204 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 RCN3Q96D15 328 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 C1orf159Q96HA4 380 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 SYT3Q9BQG1 590 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 DYNLRB1Q9NP97 96 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 INIPQ9NRY2 104 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 LPAR3Q9UBY5 353 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 REV1Q9UBZ9 1251 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 SLC7A8Q9UHI5 535 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 FZR1Q9UM11 496 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 CAPN7Q9Y6W3 813 aa10.27□□□□□ -0.77
PTPRF-211ENST00000467464 VSTM5A8MXK1 200 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 FFAR1O14842 300 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 SLC22A2O15244 555 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 PRSS23O95084 383 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 SLC2A10O95528 541 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 SNAP29O95721 258 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 IFNA2P01563 188 aa10.26□□□□□ -0.77
PTPRF-211ENST00000467464 HPXP02790 462 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms