RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B ADE8P04161 214 aa1.48□□□□□ -2.17
snR39BsnR39B PYC1P11154 1178 aaKnown RBP1.48□□□□□ -2.17
snR39BsnR39B PRP4P20053 465 aaKnown RBP1.48□□□□□ -2.17
snR39BsnR39B SLD2P34252 453 aa1.48□□□□□ -2.17
snR39BsnR39B BCD1P38772 366 aa1.48□□□□□ -2.17
snR39BsnR39B CCT4P39078 528 aaKnown RBP1.48□□□□□ -2.17
snR39BsnR39B JSN1P47135 1091 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
snR39BsnR39B CCM1P48237 864 aaPredicted RBP1.48□□□□□ -2.17
snR39BsnR39B UBC11P52492 156 aa1.48□□□□□ -2.17
snR39BsnR39B SPR28Q04921 423 aa1.48□□□□□ -2.17
snR39BsnR39B RPS9AO13516 197 aaKnown RBP1.47□□□□□ -2.17
snR39BsnR39B CDC34P14682 295 aa1.47□□□□□ -2.17
snR39BsnR39B RPA135P22138 1203 aaKnown RBP1.47□□□□□ -2.17
snR39BsnR39B PPH3P32345 308 aa1.47□□□□□ -2.17
snR39BsnR39B MUP3P38734 546 aa1.47□□□□□ -2.17
snR39BsnR39B IPL1P38991 367 aa1.47□□□□□ -2.17
snR39BsnR39B MET10P39692 1035 aa1.47□□□□□ -2.17
snR39BsnR39B FYV10P40492 516 aa1.47□□□□□ -2.17
snR39BsnR39B CEP3P40969 608 aa1.47□□□□□ -2.17
snR39BsnR39B YLR225CQ05948 407 aaKnown RBP1.47□□□□□ -2.17
snR39BsnR39B ESC2Q06340 456 aa1.47□□□□□ -2.17
snR39BsnR39B YLR415CO13578 112 aa1.46□□□□□ -2.18
snR39BsnR39B SIR3P06701 978 aa1.46□□□□□ -2.18
snR39BsnR39B NUP1P20676 1076 aa1.46□□□□□ -2.18
snR39BsnR39B APN1P22936 367 aa1.46□□□□□ -2.18
snR39BsnR39B RPD3P32561 433 aa1.46□□□□□ -2.18
snR39BsnR39B GGA2P38817 585 aaKnown RBP1.46□□□□□ -2.18
snR39BsnR39B HOS4P40480 1083 aa1.46□□□□□ -2.18
snR39BsnR39B ULP2P40537 1034 aaPredicted RBP1.46□□□□□ -2.18
snR39BsnR39B GUS1P46655 708 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
snR39BsnR39B GIS2P53849 153 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
snR39BsnR39B ATG4P53867 494 aa1.46□□□□□ -2.18
snR39BsnR39B STP1Q00947 519 aa1.46□□□□□ -2.18
snR39BsnR39B VPS16Q03308 798 aa1.46□□□□□ -2.18
snR39BsnR39B YKL033W-AQ86ZR7 236 aa1.46□□□□□ -2.18
snR39BsnR39B NPP1P25353 742 aa1.45□□□□□ -2.18
snR39BsnR39B URA1P28272 314 aaPredicted RBP1.45□□□□□ -2.18
snR39BsnR39B SBA1P28707 216 aaKnown RBP1.45□□□□□ -2.18
snR39BsnR39B HIR1P32479 840 aa1.45□□□□□ -2.18
snR39BsnR39B AFR1P33304 620 aa1.45□□□□□ -2.18
snR39BsnR39B MNR2P35724 969 aa1.45□□□□□ -2.18
snR39BsnR39B YBR259WP38338 688 aa1.45□□□□□ -2.18
snR39BsnR39B CCT3P39077 534 aaKnown RBP1.45□□□□□ -2.18
snR39BsnR39B BAP3P41815 604 aa1.45□□□□□ -2.18
snR39BsnR39B PSA1P41940 361 aaKnown RBP1.45□□□□□ -2.18
snR39BsnR39B IRC8P47046 822 aa1.45□□□□□ -2.18
snR39BsnR39B YJR107WP47145 328 aa1.45□□□□□ -2.18
snR39BsnR39B ATE1P16639 503 aa1.44□□□□□ -2.18
snR39BsnR39B KCC4P25389 1037 aa1.44□□□□□ -2.18
snR39BsnR39B EUG1P32474 517 aa1.44□□□□□ -2.18
snR39BsnR39B PET112P33893 541 aa1.44□□□□□ -2.18
snR39BsnR39B ECM1P39715 212 aa1.44□□□□□ -2.18
snR39BsnR39B HDA1P53973 706 aa1.44□□□□□ -2.18
snR39BsnR39B SEN54Q02825 467 aaPredicted RBP1.44□□□□□ -2.18
snR39BsnR39B FMP30Q02883 468 aa1.44□□□□□ -2.18
snR39BsnR39B MUS81Q04149 632 aaPredicted RBP1.44□□□□□ -2.18
snR39BsnR39B GAD1Q04792 585 aa1.44□□□□□ -2.18
snR39BsnR39B ORM2Q06144 216 aa1.44□□□□□ -2.18
snR39BsnR39B YDR306CQ06640 478 aa1.44□□□□□ -2.18
snR39BsnR39B IRC3Q06683 689 aa1.44□□□□□ -2.18
snR39BsnR39B GEP3Q08622 556 aa1.44□□□□□ -2.18
snR39BsnR39B CLF1Q12309 687 aaPredicted RBP1.44□□□□□ -2.18
snR39BsnR39B ADE5,7P07244 802 aaKnown RBP1.43□□□□□ -2.18
snR39BsnR39B AGP1P25376 633 aa1.43□□□□□ -2.18
snR39BsnR39B AAR2P32357 355 aaPredicted RBP1.43□□□□□ -2.18
snR39BsnR39B UGP1P32861 499 aaKnown RBP1.43□□□□□ -2.18
snR39BsnR39B SAP190P36123 1033 aa1.43□□□□□ -2.18
snR39BsnR39B GMH1P36125 273 aa1.43□□□□□ -2.18
snR39BsnR39B YRO2P38079 344 aa1.43□□□□□ -2.18
snR39BsnR39B UBS1P38290 277 aa1.43□□□□□ -2.18
snR39BsnR39B SIC1P38634 284 aa1.43□□□□□ -2.18
snR39BsnR39B SPC97P38863 823 aa1.43□□□□□ -2.18
snR39BsnR39B SAK1P38990 1142 aa1.43□□□□□ -2.18
snR39BsnR39B MBP1P39678 833 aa1.43□□□□□ -2.18
snR39BsnR39B SIT1P39980 628 aa1.43□□□□□ -2.18
snR39BsnR39B ATG36P46983 293 aa1.43□□□□□ -2.18
snR39BsnR39B DUS1P53759 423 aaKnown RBP1.43□□□□□ -2.18
snR39BsnR39B ASM4Q05166 528 aa1.43□□□□□ -2.18
snR39BsnR39B RRP15Q06511 250 aaPredicted RBP1.43□□□□□ -2.18
snR39BsnR39B TGL5Q12043 749 aa1.43□□□□□ -2.18
snR39BsnR39B YOR111WQ99210 232 aa1.43□□□□□ -2.18
snR39BsnR39B SAT4P25333 603 aaKnown RBP1.42□□□□□ -2.18
snR39BsnR39B CCT5P40413 562 aaKnown RBP1.42□□□□□ -2.18
snR39BsnR39B SSY5P47002 699 aa1.42□□□□□ -2.18
snR39BsnR39B POL32P47110 350 aa1.42□□□□□ -2.18
snR39BsnR39B LCD1Q04377 747 aa1.42□□□□□ -2.18
snR39BsnR39B RSC3Q06639 885 aa1.42□□□□□ -2.18
snR39BsnR39B PHR1P05066 565 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
snR39BsnR39B CYS3P31373 394 aaKnown RBP1.41□□□□□ -2.18
snR39BsnR39B ABD1P32783 436 aaPredicted RBP1.41□□□□□ -2.18
snR39BsnR39B REC104P33323 182 aa1.41□□□□□ -2.18
snR39BsnR39B PFA3P42836 336 aa1.41□□□□□ -2.18
snR39BsnR39B PAN2P53010 1115 aaPredicted RBP1.41□□□□□ -2.18
snR39BsnR39B NOG2P53742 486 aaKnown RBP1.41□□□□□ -2.18
snR39BsnR39B CTK1Q03957 528 aaKnown RBP1.41□□□□□ -2.18
snR39BsnR39B SHE9Q04172 456 aa1.41□□□□□ -2.18
snR39BsnR39B MLH3Q12083 715 aa1.41□□□□□ -2.18
snR39BsnR39B TSR4P25040 408 aa1.4□□□□□ -2.19
snR39BsnR39B FUB1P25659 250 aa1.4□□□□□ -2.19
snR39BsnR39B MVD1P32377 396 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms