RNA–Protein interactions for RNA: YPR132W

RPS23B, Transcript of Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit, yeast

Gene RPS23B, Length 438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS23B	YPR132W	YER152C	P10356	443 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	RNA1	P11745	407 aa	Known RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	RED1	P14291	827 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	SEC18	P18759	758 aa	Known RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	TRX1	P22217	103 aa	Known RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	NFS1	P25374	497 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	DBF4	P32325	704 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	ASH1	P34233	588 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	PCM1	P38628	557 aa	Known RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	EMP65	P40085	556 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	GZF3	P42944	551 aa	Known RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	QRI7	P43122	407 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	GYP8	P43570	497 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	SPO74	P45819	413 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	YJR098C	P47139	656 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	YGR153W	P48238	217 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	OCA1	P50946	238 aa	Predicted RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	AIM14	P53109	570 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	LSC2	P53312	427 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	PTA1	Q01329	785 aa	Predicted RBP	3.58	□□□□□ -1.84
RPS23B	YPR132W	BLS1	Q06071	122 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	RSC3	Q06639	885 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	ADY3	Q07732	790 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	YIG1	Q08956	461 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	DPH6	Q12429	685 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	SIN3	P22579	1536 aa		3.58	□□□□□ -1.84
RPS23B	YPR132W	CDC4	P07834	779 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	AFT1	P22149	690 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	PER1	P25625	357 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	CDC48	P25694	835 aa	Known RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	MSH1	P25846	959 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	HEM12	P32347	362 aa	Predicted RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	IME2	P32581	645 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	ORC2	P32833	620 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	REC104	P33323	182 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	SEG2	P34250	1132 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	MUD2	P36084	527 aa	Known RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	VRP1	P37370	817 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	BIT2	P38346	545 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	TIF4631	P39935	952 aa	Known RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	NOP16	P40007	231 aa	Known RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	TOK1	P40310	691 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	RAD26	P40352	1085 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	CAF16	P43569	289 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	ROG3	P43602	733 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	SLD3	P53135	668 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	NCS2	P53923	493 aa	Predicted RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	SEC5	P89102	971 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
RPS23B	YPR132W	HAS1	Q03532	505 aa	Known RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	TAF11	Q04226	346 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	YKU80	Q04437	629 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	GSF2	Q04697	403 aa	Known RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	HIM1	Q06674	414 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	BRE4	Q07660	1125 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	MET7	Q08645	548 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	SOG2	Q08817	791 aa		3.57	□□□□□ -1.84
RPS23B	YPR132W	SMF3	Q12078	473 aa	Predicted RBP	3.57	□□□□□ -1.84
RPS23B	YPR132W	THO2	P53552	1597 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	MRP10	O75012	95 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	RPC40	P07703	335 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	RPL11A	P0C0W9	174 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	HMG1	P12683	1054 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	HOG1	P32485	435 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	BYE1	P36106	594 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	TDA3	P38758	523 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	YAR028W	P39548	234 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	FYV8	P46949	817 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	MNN11	P46985	422 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	SET2	P46995	733 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	UPF3	P48412	387 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	RNR4	P49723	345 aa	Known RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	GUP1	P53154	560 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	DAM1	P53267	343 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	ARA2	Q04212	335 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	COG8	Q04632	607 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	ATG33	Q06485	197 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	SWA2	Q06677	668 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	GUP2	Q08929	609 aa		3.56	□□□□□ -1.84
RPS23B	YPR132W	RPL11B	Q3E757	174 aa	Predicted RBP	3.56	□□□□□ -1.84
RPS23B	YPR132W	ENA1	P13587	1091 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	VMA2	P16140	517 aa	Known RBP	3.55	□□□□□ -1.84
RPS23B	YPR132W	AAC3	P18238	307 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	COX11	P19516	300 aa	Known RBP	3.55	□□□□□ -1.84
RPS23B	YPR132W	DAL7	P21826	554 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	AMS1	P22855	1083 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	APN1	P22936	367 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	CDC12	P32468	407 aa	Known RBP	3.55	□□□□□ -1.84
RPS23B	YPR132W	PAH1	P32567	862 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	YKU70	P32807	602 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	NPL6	P32832	435 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	AFR1	P33304	620 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	EMC3	P36039	253 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	MCD4	P36051	919 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	ESL2	P36168	1195 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	ARL1	P38116	183 aa	Known RBP	3.55	□□□□□ -1.84
RPS23B	YPR132W	REI1	P38344	393 aa	Predicted RBP	3.55	□□□□□ -1.84
RPS23B	YPR132W	PNT1	P38969	423 aa		3.55	□□□□□ -1.84
RPS23B	YPR132W	KAP123	P40069	1113 aa	Known RBP	3.55	□□□□□ -1.84
RPS23B	YPR132W	AIR1	P40507	360 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms