RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C MOT1P32333 1867 aa8.96□□□□□ -0.98
SRP54YPR088C SNF1P06782 633 aaKnown RBP8.95□□□□□ -0.98
SRP54YPR088C SRB4P32569 687 aa8.95□□□□□ -0.98
SRP54YPR088C DUR3P33413 735 aa8.95□□□□□ -0.98
SRP54YPR088C KIC1P38692 1080 aa8.95□□□□□ -0.98
SRP54YPR088C YMR124WP39523 943 aaKnown RBP8.95□□□□□ -0.98
SRP54YPR088C DAS1P47005 663 aa8.95□□□□□ -0.98
SRP54YPR088C BOP3P53958 396 aa8.95□□□□□ -0.98
SRP54YPR088C HOS3Q02959 697 aaKnown RBP8.95□□□□□ -0.98
SRP54YPR088C SOV1Q04748 898 aa8.95□□□□□ -0.98
SRP54YPR088C SML1Q04964 104 aa8.95□□□□□ -0.98
SRP54YPR088C VAC14Q06708 880 aa8.95□□□□□ -0.98
SRP54YPR088C PET111P08468 800 aa8.94□□□□□ -0.98
SRP54YPR088C IME1P21190 360 aa8.94□□□□□ -0.98
SRP54YPR088C PAH1P32567 862 aa8.94□□□□□ -0.98
SRP54YPR088C SET5P38890 526 aaKnown RBP8.94□□□□□ -0.98
SRP54YPR088C NDC80P40460 691 aa8.94□□□□□ -0.98
SRP54YPR088C CPR7P47103 393 aa8.94□□□□□ -0.98
SRP54YPR088C VPS70P47161 811 aa8.94□□□□□ -0.98
SRP54YPR088C CLA4P48562 842 aa8.94□□□□□ -0.98
SRP54YPR088C VPS60Q03390 229 aa8.94□□□□□ -0.98
SRP54YPR088C SGT2Q12118 346 aaKnown RBP8.94□□□□□ -0.98
SRP54YPR088C MCM16Q12262 181 aa8.94□□□□□ -0.98
SRP54YPR088C MAM3Q12296 706 aa8.94□□□□□ -0.98
SRP54YPR088C ZPS1Q12512 249 aa8.94□□□□□ -0.98
SRP54YPR088C CDC33P07260 213 aaKnown RBP8.94□□□□□ -0.98
SRP54YPR088C CDC42P19073 191 aa8.94□□□□□ -0.98
SRP54YPR088C CKI1P20485 582 aa8.94□□□□□ -0.98
SRP54YPR088C CDC11P32458 415 aa8.94□□□□□ -0.98
SRP54YPR088C TRZ1P36159 838 aaPredicted RBP8.94□□□□□ -0.98
SRP54YPR088C TCD1P38756 429 aa8.94□□□□□ -0.98
SRP54YPR088C ALD5P40047 520 aaKnown RBP8.94□□□□□ -0.98
SRP54YPR088C CEP3P40969 608 aa8.94□□□□□ -0.98
SRP54YPR088C AZR1P50080 613 aa8.94□□□□□ -0.98
SRP54YPR088C YGR021WP53212 290 aa8.94□□□□□ -0.98
SRP54YPR088C VPS62P53285 467 aa8.94□□□□□ -0.98
SRP54YPR088C STE20Q03497 939 aaKnown RBP8.94□□□□□ -0.98
SRP54YPR088C CEF1Q03654 590 aaPredicted RBP8.94□□□□□ -0.98
SRP54YPR088C YLR001CQ07895 862 aa8.94□□□□□ -0.98
SRP54YPR088C RIF1P29539 1916 aa8.93□□□□□ -0.98
SRP54YPR088C CBF2P32504 956 aa8.93□□□□□ -0.98
SRP54YPR088C SYH1Q02875 849 aaKnown RBP8.93□□□□□ -0.98
SRP54YPR088C NGL3Q03210 505 aa8.93□□□□□ -0.98
SRP54YPR088C VPS72Q03388 795 aa8.93□□□□□ -0.98
SRP54YPR088C PPM1Q04081 328 aa8.93□□□□□ -0.98
SRP54YPR088C SIL1Q08199 421 aa8.93□□□□□ -0.98
SRP54YPR088C COX4P04037 155 aa8.92□□□□□ -0.98
SRP54YPR088C ASP3-2P0CX77 362 aa8.92□□□□□ -0.98
SRP54YPR088C ASP3-3P0CX78 362 aa8.92□□□□□ -0.98
SRP54YPR088C ASP3-4P0CX79 362 aa8.92□□□□□ -0.98
SRP54YPR088C ASP3-1P0CZ17 362 aa8.92□□□□□ -0.98
SRP54YPR088C GLN3P18494 730 aa8.92□□□□□ -0.98
SRP54YPR088C ADE2P21264 571 aaKnown RBP8.92□□□□□ -0.98
SRP54YPR088C STE11P23561 717 aa8.92□□□□□ -0.98
SRP54YPR088C SCJ1P25303 377 aa8.92□□□□□ -0.98
SRP54YPR088C DAL2P25335 343 aa8.92□□□□□ -0.98
SRP54YPR088C SEC21P32074 935 aaKnown RBP8.92□□□□□ -0.98
SRP54YPR088C TRM2P33753 639 aa8.92□□□□□ -0.98
SRP54YPR088C CSG2P35206 410 aa8.92□□□□□ -0.98
SRP54YPR088C RRD1P40454 393 aaKnown RBP8.92□□□□□ -0.98
SRP54YPR088C ISM1P48526 1002 aa8.92□□□□□ -0.98
SRP54YPR088C MUK1Q02866 612 aa8.92□□□□□ -0.98
SRP54YPR088C DOT1Q04089 582 aaKnown RBP8.92□□□□□ -0.98
SRP54YPR088C COX11P19516 300 aaKnown RBP8.91□□□□□ -0.98
SRP54YPR088C BUD2P33314 1104 aa8.91□□□□□ -0.98
SRP54YPR088C EXO5P38289 585 aa8.91□□□□□ -0.98
SRP54YPR088C BUD16P39988 312 aa8.91□□□□□ -0.98
SRP54YPR088C ABP140Q08641 628 aaKnown RBP8.91□□□□□ -0.98
SRP54YPR088C AI5_BETAQ9ZZX0 354 aa8.91□□□□□ -0.98
SRP54YPR088C SPT2P06843 333 aaPredicted RBP8.91□□□□□ -0.98
SRP54YPR088C RPL4AP10664 362 aaKnown RBP8.91□□□□□ -0.98
SRP54YPR088C DPB3P27344 201 aa8.91□□□□□ -0.98
SRP54YPR088C PRR1P28708 518 aa8.91□□□□□ -0.98
SRP54YPR088C YEL043WP32618 956 aa8.91□□□□□ -0.98
SRP54YPR088C RPT1P33299 467 aaKnown RBP8.91□□□□□ -0.98
SRP54YPR088C YKL050CP35736 922 aa8.91□□□□□ -0.98
SRP54YPR088C UIP5P36137 443 aa8.91□□□□□ -0.98
SRP54YPR088C LDH1P38139 375 aa8.91□□□□□ -0.98
SRP54YPR088C YAP1801P38856 637 aa8.91□□□□□ -0.98
SRP54YPR088C LAM5P43560 674 aa8.91□□□□□ -0.98
SRP54YPR088C ULI1P43604 169 aa8.91□□□□□ -0.98
SRP54YPR088C RPL4BP49626 362 aaKnown RBP8.91□□□□□ -0.98
SRP54YPR088C DRN1P53255 507 aaKnown RBP8.91□□□□□ -0.98
SRP54YPR088C BTN2P53286 410 aa8.91□□□□□ -0.98
SRP54YPR088C YMR018WQ04364 514 aa8.91□□□□□ -0.98
SRP54YPR088C HEM1P09950 548 aaPredicted RBP8.9□□□□□ -0.99
SRP54YPR088C ERG11P10614 530 aa8.9□□□□□ -0.99
SRP54YPR088C RRT12P25381 491 aa8.9□□□□□ -0.99
SRP54YPR088C BLI1P35727 113 aa8.9□□□□□ -0.99
SRP54YPR088C REI1P38344 393 aaPredicted RBP8.9□□□□□ -0.99
SRP54YPR088C PSY2P40164 858 aa8.9□□□□□ -0.99
SRP54YPR088C YTA12P40341 825 aa8.9□□□□□ -0.99
SRP54YPR088C SBE2P42223 864 aaKnown RBP8.9□□□□□ -0.99
SRP54YPR088C SFI1Q12369 946 aa8.9□□□□□ -0.99
SRP54YPR088C ECM3Q99252 613 aa8.9□□□□□ -0.99
SRP54YPR088C RPS3P05750 240 aaKnown RBP8.89□□□□□ -0.99
SRP54YPR088C RNR1P21524 888 aaKnown RBP8.89□□□□□ -0.99
SRP54YPR088C PTC4P38089 393 aa8.89□□□□□ -0.99
SRP54YPR088C DYS1P38791 387 aa8.89□□□□□ -0.99
SRP54YPR088C TVP23P38962 199 aa8.89□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms