RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W LCB5Q06147 687 aaKnown RBP5.91□□□□□ -1.46
PDH1YPR002W OPY2Q06810 360 aa5.91□□□□□ -1.46
PDH1YPR002W YPL260WQ08977 551 aa5.91□□□□□ -1.46
PDH1YPR002W ARG4P04076 463 aaPredicted RBP5.9□□□□□ -1.46
PDH1YPR002W SSB1P11484 613 aaKnown RBP5.9□□□□□ -1.46
PDH1YPR002W PDB1P32473 366 aaKnown RBP5.9□□□□□ -1.46
PDH1YPR002W MDL2P33311 773 aa5.9□□□□□ -1.46
PDH1YPR002W SWH1P35845 1188 aa5.9□□□□□ -1.46
PDH1YPR002W ISW1P38144 1129 aa5.9□□□□□ -1.46
PDH1YPR002W SPP381P38282 291 aaPredicted RBP5.9□□□□□ -1.46
PDH1YPR002W SSB2P40150 613 aaKnown RBP5.9□□□□□ -1.46
PDH1YPR002W YNL320WP42840 284 aa5.9□□□□□ -1.46
PDH1YPR002W CIT3P43635 486 aa5.9□□□□□ -1.46
PDH1YPR002W MDM1Q01846 1127 aa5.9□□□□□ -1.46
PDH1YPR002W DIG1Q03063 452 aaKnown RBP5.9□□□□□ -1.46
PDH1YPR002W TY1A-DR3Q12441 440 aa5.9□□□□□ -1.46
PDH1YPR002W ARD1P07347 238 aaPredicted RBP5.89□□□□□ -1.47
PDH1YPR002W RPL8BP29453 256 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W RGA1P39083 1007 aa5.89□□□□□ -1.47
PDH1YPR002W YMR124WP39523 943 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W NPR2P39923 615 aa5.89□□□□□ -1.47
PDH1YPR002W PIP2P52960 996 aa5.89□□□□□ -1.47
PDH1YPR002W SDA1P53313 767 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W OPT2Q06593 877 aa5.89□□□□□ -1.47
PDH1YPR002W BDF2Q07442 638 aa5.89□□□□□ -1.47
PDH1YPR002W MSC6Q08818 692 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W TCO89Q08921 799 aa5.89□□□□□ -1.47
PDH1YPR002W RIO1Q12196 484 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W RPS31P05759 152 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W VMA3P25515 160 aa5.89□□□□□ -1.47
PDH1YPR002W CDC60P26637 1090 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W APL1P27351 700 aa5.89□□□□□ -1.47
PDH1YPR002W RCK2P38623 610 aa5.89□□□□□ -1.47
PDH1YPR002W MMM1P41800 426 aa5.89□□□□□ -1.47
PDH1YPR002W TOS3P43637 560 aa5.89□□□□□ -1.47
PDH1YPR002W KAP114P53067 1004 aa5.89□□□□□ -1.47
PDH1YPR002W DSE4P53753 1117 aa5.89□□□□□ -1.47
PDH1YPR002W CBK1P53894 756 aa5.89□□□□□ -1.47
PDH1YPR002W ECI1Q05871 280 aa5.89□□□□□ -1.47
PDH1YPR002W APL5Q08951 932 aaKnown RBP5.89□□□□□ -1.47
PDH1YPR002W PSF3Q12146 194 aa5.89□□□□□ -1.47
PDH1YPR002W CLF1Q12309 687 aaPredicted RBP5.89□□□□□ -1.47
PDH1YPR002W PRP9P19736 530 aaKnown RBP5.88□□□□□ -1.47
PDH1YPR002W ARG1P22768 420 aa5.88□□□□□ -1.47
PDH1YPR002W YCR051WP25631 222 aa5.88□□□□□ -1.47
PDH1YPR002W HEM3P28789 327 aa5.88□□□□□ -1.47
PDH1YPR002W LOS1P33418 1100 aaPredicted RBP5.88□□□□□ -1.47
PDH1YPR002W OAF3P36023 863 aa5.88□□□□□ -1.47
PDH1YPR002W SDS3P40505 327 aa5.88□□□□□ -1.47
PDH1YPR002W ASE1P50275 885 aa5.88□□□□□ -1.47
PDH1YPR002W UTP22P53254 1237 aaPredicted RBP5.88□□□□□ -1.47
PDH1YPR002W USA1Q03714 838 aa5.88□□□□□ -1.47
PDH1YPR002W SMD2Q06217 110 aaKnown RBP5.88□□□□□ -1.47
PDH1YPR002W YLR177WQ06251 628 aa5.88□□□□□ -1.47
PDH1YPR002W WRS1Q12109 432 aaKnown RBP5.88□□□□□ -1.47
PDH1YPR002W BUG1Q12191 341 aa5.88□□□□□ -1.47
PDH1YPR002W SEC39Q12745 709 aa5.88□□□□□ -1.47
PDH1YPR002W GAL11P19659 1081 aa5.87□□□□□ -1.47
PDH1YPR002W RPB10P22139 70 aa5.87□□□□□ -1.47
PDH1YPR002W NIP1P32497 812 aaKnown RBP5.87□□□□□ -1.47
PDH1YPR002W SWI3P32591 825 aa5.87□□□□□ -1.47
PDH1YPR002W FRD1P32614 470 aaKnown RBP5.87□□□□□ -1.47
PDH1YPR002W XRS2P33301 854 aa5.87□□□□□ -1.47
PDH1YPR002W SAS3P34218 831 aa5.87□□□□□ -1.47
PDH1YPR002W MCD4P36051 919 aa5.87□□□□□ -1.47
PDH1YPR002W HEL1P36113 551 aa5.87□□□□□ -1.47
PDH1YPR002W YKR018CP36114 725 aa5.87□□□□□ -1.47
PDH1YPR002W LDH1P38139 375 aa5.87□□□□□ -1.47
PDH1YPR002W OLA1P38219 394 aaKnown RBP5.87□□□□□ -1.47
PDH1YPR002W PPX1P38698 397 aa5.87□□□□□ -1.47
PDH1YPR002W DYS1P38791 387 aa5.87□□□□□ -1.47
PDH1YPR002W RIO2P40160 425 aaKnown RBP5.87□□□□□ -1.47
PDH1YPR002W QDR2P40474 542 aa5.87□□□□□ -1.47
PDH1YPR002W RPN11P43588 306 aaKnown RBP5.87□□□□□ -1.47
PDH1YPR002W ROG3P43602 733 aa5.87□□□□□ -1.47
PDH1YPR002W UBP15P50101 1230 aa5.87□□□□□ -1.47
PDH1YPR002W SUT1P53032 299 aaKnown RBP5.87□□□□□ -1.47
PDH1YPR002W YGR021WP53212 290 aa5.87□□□□□ -1.47
PDH1YPR002W TOF1P53840 1238 aa5.87□□□□□ -1.47
PDH1YPR002W ADA2Q02336 434 aa5.87□□□□□ -1.47
PDH1YPR002W EEB1Q02891 456 aa5.87□□□□□ -1.47
PDH1YPR002W VPS30Q02948 557 aa5.87□□□□□ -1.47
PDH1YPR002W YML119WQ03208 357 aa5.87□□□□□ -1.47
PDH1YPR002W UBX2Q04228 584 aa5.87□□□□□ -1.47
PDH1YPR002W TAF9Q05027 157 aa5.87□□□□□ -1.47
PDH1YPR002W NUT2Q06213 157 aa5.87□□□□□ -1.47
PDH1YPR002W PIG1Q06216 648 aa5.87□□□□□ -1.47
PDH1YPR002W YDL057WQ07379 328 aa5.87□□□□□ -1.47
PDH1YPR002W TRP2P00899 507 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W KRS1P15180 591 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W TRK2P28584 889 aa5.86□□□□□ -1.47
PDH1YPR002W UBC6P33296 250 aaPredicted RBP5.86□□□□□ -1.47
PDH1YPR002W KTR2P33550 425 aa5.86□□□□□ -1.47
PDH1YPR002W GLY1P37303 387 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W CCT2P39076 527 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W SMX2P40204 77 aaKnown RBP5.86□□□□□ -1.47
PDH1YPR002W NMD5P46970 1048 aa5.86□□□□□ -1.47
PDH1YPR002W RPC17P47076 161 aa5.86□□□□□ -1.47
PDH1YPR002W RIM8P53179 542 aa5.86□□□□□ -1.47
PDH1YPR002W FOL1P53848 824 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms