RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C TCO89Q08921 799 aa7.93□□□□□ -1.14
UME1YPL139C OSW2Q12202 724 aa7.93□□□□□ -1.14
UME1YPL139C PCK1P10963 549 aa7.92□□□□□ -1.14
UME1YPL139C POL3P15436 1097 aa7.92□□□□□ -1.14
UME1YPL139C PRR1P28708 518 aa7.92□□□□□ -1.14
UME1YPL139C ALT2P52892 507 aa7.92□□□□□ -1.14
UME1YPL139C PKH2Q12236 1081 aaKnown RBP7.92□□□□□ -1.14
UME1YPL139C BDH2P39713 417 aa7.91□□□□□ -1.14
UME1YPL139C MAF1P41910 395 aa7.91□□□□□ -1.14
UME1YPL139C ALG11P53954 548 aaKnown RBP7.91□□□□□ -1.14
UME1YPL139C VMS1Q04311 632 aaKnown RBP7.91□□□□□ -1.14
UME1YPL139C OSH2Q12451 1283 aa7.91□□□□□ -1.14
UME1YPL139C PHO8P11491 566 aa7.9□□□□□ -1.14
UME1YPL139C PDR1P12383 1068 aa7.9□□□□□ -1.14
UME1YPL139C SEC21P32074 935 aaKnown RBP7.9□□□□□ -1.14
UME1YPL139C BIO2P32451 375 aa7.9□□□□□ -1.14
UME1YPL139C SKG6P32900 734 aaPredicted RBP7.9□□□□□ -1.14
UME1YPL139C MRPL7P36519 292 aa7.9□□□□□ -1.14
UME1YPL139C UBP13P38187 747 aa7.9□□□□□ -1.14
UME1YPL139C MMS4P38257 691 aa7.9□□□□□ -1.14
UME1YPL139C CCC2P38995 1004 aa7.9□□□□□ -1.14
UME1YPL139C SEC5P89102 971 aa7.9□□□□□ -1.14
UME1YPL139C LCD1Q04377 747 aa7.9□□□□□ -1.14
UME1YPL139C CDD1Q06549 142 aa7.9□□□□□ -1.14
UME1YPL139C SGO1Q08490 590 aa7.9□□□□□ -1.14
UME1YPL139C GPA1P08539 472 aa7.89□□□□□ -1.15
UME1YPL139C TAF13P11747 167 aa7.89□□□□□ -1.15
UME1YPL139C SPO11P23179 398 aa7.89□□□□□ -1.15
UME1YPL139C RDH54P38086 958 aa7.89□□□□□ -1.15
UME1YPL139C YER130CP39959 443 aa7.89□□□□□ -1.15
UME1YPL139C YFL034WP43564 1073 aa7.89□□□□□ -1.15
UME1YPL139C TOS3P43637 560 aa7.89□□□□□ -1.15
UME1YPL139C HST1P53685 503 aa7.89□□□□□ -1.15
UME1YPL139C RCR2Q03446 210 aaKnown RBP7.89□□□□□ -1.15
UME1YPL139C SPO71Q03868 1245 aa7.89□□□□□ -1.15
UME1YPL139C UTP14Q04500 899 aaKnown RBP7.89□□□□□ -1.15
UME1YPL139C TLG2Q08144 397 aa7.89□□□□□ -1.15
UME1YPL139C DNL4Q08387 944 aaPredicted RBP7.89□□□□□ -1.15
UME1YPL139C PUS1Q12211 544 aaKnown RBP7.89□□□□□ -1.15
UME1YPL139C MUD1P32605 298 aaKnown RBP7.88□□□□□ -1.15
UME1YPL139C PCM1P38628 557 aaKnown RBP7.88□□□□□ -1.15
UME1YPL139C LAA1P39526 2014 aa7.88□□□□□ -1.15
UME1YPL139C OYE3P41816 400 aaPredicted RBP7.88□□□□□ -1.15
UME1YPL139C CIR1P42940 261 aa7.88□□□□□ -1.15
UME1YPL139C CCM1P48237 864 aaPredicted RBP7.88□□□□□ -1.15
UME1YPL139C ISM1P48526 1002 aa7.88□□□□□ -1.15
UME1YPL139C YPT11P48559 417 aa7.88□□□□□ -1.15
UME1YPL139C HSH155P49955 971 aaKnown RBP7.88□□□□□ -1.15
UME1YPL139C SPC98P53540 846 aa7.88□□□□□ -1.15
UME1YPL139C ESC8Q08119 714 aa7.88□□□□□ -1.15
UME1YPL139C DDP1Q99321 188 aaKnown RBP7.88□□□□□ -1.15
UME1YPL139C ASP3-2P0CX77 362 aa7.87□□□□□ -1.15
UME1YPL139C ASP3-3P0CX78 362 aa7.87□□□□□ -1.15
UME1YPL139C ASP3-4P0CX79 362 aa7.87□□□□□ -1.15
UME1YPL139C ASP3-1P0CZ17 362 aa7.87□□□□□ -1.15
UME1YPL139C KEX2P13134 814 aa7.87□□□□□ -1.15
UME1YPL139C IME1P21190 360 aa7.87□□□□□ -1.15
UME1YPL139C CYS3P31373 394 aaKnown RBP7.87□□□□□ -1.15
UME1YPL139C SYN8P31377 255 aa7.87□□□□□ -1.15
UME1YPL139C YKL091CP33324 310 aaKnown RBP7.87□□□□□ -1.15
UME1YPL139C AIR1P40507 360 aaKnown RBP7.87□□□□□ -1.15
UME1YPL139C HYR1P40581 163 aaKnown RBP7.87□□□□□ -1.15
UME1YPL139C CWC21Q03375 135 aaKnown RBP7.87□□□□□ -1.15
UME1YPL139C PIG1Q06216 648 aa7.87□□□□□ -1.15
UME1YPL139C AFT2Q08957 416 aa7.87□□□□□ -1.15
UME1YPL139C CTF3Q12748 733 aa7.87□□□□□ -1.15
UME1YPL139C TOR2P32600 2474 aaKnown RBP7.87□□□□□ -1.15
UME1YPL139C PSO2P30620 661 aa7.86□□□□□ -1.15
UME1YPL139C CDC11P32458 415 aa7.86□□□□□ -1.15
UME1YPL139C ELM1P32801 640 aa7.86□□□□□ -1.15
UME1YPL139C RAD54P32863 898 aa7.86□□□□□ -1.15
UME1YPL139C TRM2P33753 639 aa7.86□□□□□ -1.15
UME1YPL139C VPS35P34110 944 aa7.86□□□□□ -1.15
UME1YPL139C AGP2P38090 596 aa7.86□□□□□ -1.15
UME1YPL139C YBR284WP38150 797 aa7.86□□□□□ -1.15
UME1YPL139C SIF2P38262 535 aa7.86□□□□□ -1.15
UME1YPL139C NPP2P39997 493 aa7.86□□□□□ -1.15
UME1YPL139C DJP1P40564 432 aa7.86□□□□□ -1.15
UME1YPL139C SCD6P45978 349 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
UME1YPL139C ZAP1P47043 880 aa7.86□□□□□ -1.15
UME1YPL139C STP1Q00947 519 aa7.86□□□□□ -1.15
UME1YPL139C MRI1Q06489 411 aaKnown RBP7.86□□□□□ -1.15
UME1YPL139C PLP2Q12017 286 aa7.86□□□□□ -1.15
UME1YPL139C SLX4Q12098 748 aa7.86□□□□□ -1.15
UME1YPL139C SAC6P32599 642 aaKnown RBP7.85□□□□□ -1.15
UME1YPL139C PEP7P32609 515 aa7.85□□□□□ -1.15
UME1YPL139C HMT1P38074 348 aa7.85□□□□□ -1.15
UME1YPL139C CCT5P40413 562 aaKnown RBP7.85□□□□□ -1.15
UME1YPL139C AIP1P46680 615 aaKnown RBP7.85□□□□□ -1.15
UME1YPL139C YJL045WP47052 634 aa7.85□□□□□ -1.15
UME1YPL139C SHE10P53075 577 aa7.85□□□□□ -1.15
UME1YPL139C VID30P53076 958 aa7.85□□□□□ -1.15
UME1YPL139C TIM8P57744 87 aa7.85□□□□□ -1.15
UME1YPL139C YLR257WQ06146 321 aaKnown RBP7.85□□□□□ -1.15
UME1YPL139C MRN1Q08925 612 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
UME1YPL139C APC11Q12157 165 aa7.85□□□□□ -1.15
UME1YPL139C REC8Q12188 680 aa7.85□□□□□ -1.15
UME1YPL139C LSP1Q12230 341 aaKnown RBP7.85□□□□□ -1.15
UME1YPL139C PPZ1P26570 692 aa7.84□□□□□ -1.15
UME1YPL139C SAF1P38352 637 aa7.84□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms