RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W URA1P28272 314 aaPredicted RBP6.41□□□□□ -1.38
VPS28YPL065W CTF13P35203 478 aa6.41□□□□□ -1.38
VPS28YPL065W PET10P36139 283 aa6.41□□□□□ -1.38
VPS28YPL065W MNN1P39106 762 aa6.41□□□□□ -1.38
VPS28YPL065W STB4P50104 949 aa6.41□□□□□ -1.38
VPS28YPL065W ERG5P54781 538 aa6.41□□□□□ -1.38
VPS28YPL065W GDH3P39708 457 aa6.4□□□□□ -1.38
VPS28YPL065W UBP6P43593 499 aaKnown RBP6.4□□□□□ -1.38
VPS28YPL065W HSV2P50079 448 aaPredicted RBP6.4□□□□□ -1.38
VPS28YPL065W PUS2P53167 370 aa6.4□□□□□ -1.38
VPS28YPL065W DLT1Q04216 342 aa6.4□□□□□ -1.38
VPS28YPL065W MAL11P53048 616 aa6.39□□□□□ -1.39
VPS28YPL065W HDA1P53973 706 aa6.39□□□□□ -1.39
VPS28YPL065W TMN2Q04562 672 aa6.39□□□□□ -1.39
VPS28YPL065W POB3Q04636 552 aaKnown RBP6.39□□□□□ -1.39
VPS28YPL065W MPH2P0CD99 609 aa6.38□□□□□ -1.39
VPS28YPL065W MSH2P25847 964 aa6.38□□□□□ -1.39
VPS28YPL065W YHR078WP38799 552 aa6.38□□□□□ -1.39
VPS28YPL065W YMR206WQ03695 313 aa6.38□□□□□ -1.39
VPS28YPL065W FPR3P38911 411 aaKnown RBP6.37□□□□□ -1.39
VPS28YPL065W QRI1P43123 477 aaKnown RBP6.37□□□□□ -1.39
VPS28YPL065W DAS1P47005 663 aa6.37□□□□□ -1.39
VPS28YPL065W NIT3P49954 291 aa6.37□□□□□ -1.39
VPS28YPL065W TUB3P09734 445 aaKnown RBP6.36□□□□□ -1.39
VPS28YPL065W ELO3P40319 345 aa6.36□□□□□ -1.39
VPS28YPL065W YML122CQ03207 126 aa6.36□□□□□ -1.39
VPS28YPL065W HBT1Q07653 1046 aaKnown RBP6.36□□□□□ -1.39
VPS28YPL065W NTG2Q08214 380 aa6.36□□□□□ -1.39
VPS28YPL065W FRE5Q08908 694 aa6.36□□□□□ -1.39
VPS28YPL065W CAF20P12962 161 aaKnown RBP6.35□□□□□ -1.39
VPS28YPL065W NGG1P32494 702 aa6.35□□□□□ -1.39
VPS28YPL065W RPP1P38786 293 aa6.35□□□□□ -1.39
VPS28YPL065W YJR142WP47173 342 aa6.35□□□□□ -1.39
VPS28YPL065W NOG2P53742 486 aaKnown RBP6.35□□□□□ -1.39
VPS28YPL065W IRC10Q08118 586 aa6.35□□□□□ -1.39
VPS28YPL065W PHR1P05066 565 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
VPS28YPL065W ALG2P43636 503 aa6.34□□□□□ -1.39
VPS28YPL065W TRM13Q12383 476 aa6.34□□□□□ -1.39
VPS28YPL065W DNM1P54861 757 aa6.33□□□□□ -1.4
VPS28YPL065W PKH1Q03407 766 aa6.33□□□□□ -1.4
VPS28YPL065W ENV7Q12003 364 aa6.33□□□□□ -1.4
VPS28YPL065W NOP14Q99207 810 aaKnown RBP6.33□□□□□ -1.4
VPS28YPL065W MEF1P25039 761 aa6.32□□□□□ -1.4
VPS28YPL065W CYS3P31373 394 aaKnown RBP6.32□□□□□ -1.4
VPS28YPL065W PEX6P33760 1030 aa6.32□□□□□ -1.4
VPS28YPL065W YHL017WP38745 532 aa6.32□□□□□ -1.4
VPS28YPL065W VHR1P40522 640 aa6.32□□□□□ -1.4
VPS28YPL065W MUK1Q02866 612 aa6.32□□□□□ -1.4
VPS28YPL065W YGR161W-CQ3E744 92 aa6.32□□□□□ -1.4
VPS28YPL065W DSS1P39112 969 aa6.31□□□□□ -1.4
VPS28YPL065W PZF1P39933 429 aa6.31□□□□□ -1.4
VPS28YPL065W FKH2P41813 862 aa6.31□□□□□ -1.4
VPS28YPL065W GYP8P43570 497 aa6.31□□□□□ -1.4
VPS28YPL065W AMA1P50082 593 aa6.31□□□□□ -1.4
VPS28YPL065W DUS1P53759 423 aaKnown RBP6.31□□□□□ -1.4
VPS28YPL065W UGO1Q03327 502 aa6.31□□□□□ -1.4
VPS28YPL065W UTP14Q04500 899 aaKnown RBP6.31□□□□□ -1.4
VPS28YPL065W ADY4Q05955 493 aa6.31□□□□□ -1.4
VPS28YPL065W MDM12Q92328 271 aa6.31□□□□□ -1.4
VPS28YPL065W MTH1P35198 433 aa6.3□□□□□ -1.4
VPS28YPL065W ASI2P53895 289 aa6.3□□□□□ -1.4
VPS28YPL065W SPC29P33419 253 aa6.29□□□□□ -1.4
VPS28YPL065W PPS1P38148 807 aa6.29□□□□□ -1.4
VPS28YPL065W GND2P53319 492 aa6.29□□□□□ -1.4
VPS28YPL065W YGR283CP53336 341 aaPredicted RBP6.29□□□□□ -1.4
VPS28YPL065W TFB2Q02939 513 aa6.29□□□□□ -1.4
VPS28YPL065W ADR1P07248 1323 aa6.28□□□□□ -1.4
VPS28YPL065W RPL8AP17076 256 aaKnown RBP6.28□□□□□ -1.4
VPS28YPL065W SDS3P40505 327 aa6.28□□□□□ -1.4
VPS28YPL065W MUP1P50276 574 aa6.28□□□□□ -1.4
VPS28YPL065W HAL9Q12180 1030 aa6.28□□□□□ -1.4
VPS28YPL065W VBA3P25594 458 aa6.27□□□□□ -1.41
VPS28YPL065W EMC3P36039 253 aa6.27□□□□□ -1.41
VPS28YPL065W TY4A-JP47023 414 aa6.27□□□□□ -1.41
VPS28YPL065W DAM1P53267 343 aa6.27□□□□□ -1.41
VPS28YPL065W CRR1Q05790 422 aa6.27□□□□□ -1.41
VPS28YPL065W PRC1P00729 532 aa6.26□□□□□ -1.41
VPS28YPL065W CDC9P04819 755 aa6.26□□□□□ -1.41
VPS28YPL065W DAL7P21826 554 aa6.26□□□□□ -1.41
VPS28YPL065W ATF1P40353 525 aa6.26□□□□□ -1.41
VPS28YPL065W PRP4P20053 465 aaKnown RBP6.25□□□□□ -1.41
VPS28YPL065W GSY1P23337 708 aa6.25□□□□□ -1.41
VPS28YPL065W SFP1P32432 683 aa6.25□□□□□ -1.41
VPS28YPL065W SAP190P36123 1033 aa6.25□□□□□ -1.41
VPS28YPL065W RSC3Q06639 885 aa6.25□□□□□ -1.41
VPS28YPL065W MET7Q08645 548 aa6.25□□□□□ -1.41
VPS28YPL065W YOR022CQ12204 715 aa6.25□□□□□ -1.41
VPS28YPL065W TSR4P25040 408 aa6.24□□□□□ -1.41
VPS28YPL065W CRP1P38845 465 aaKnown RBP6.24□□□□□ -1.41
VPS28YPL065W YJL163CP46996 555 aa6.24□□□□□ -1.41
VPS28YPL065W SSY5P47002 699 aa6.24□□□□□ -1.41
VPS28YPL065W ZDS1P50111 915 aaKnown RBP6.24□□□□□ -1.41
VPS28YPL065W MRPS35P53292 345 aa6.24□□□□□ -1.41
VPS28YPL065W YNL193WP53870 558 aa6.24□□□□□ -1.41
VPS28YPL065W NRG1Q03125 231 aa6.24□□□□□ -1.41
VPS28YPL065W ATP25Q03153 612 aa6.24□□□□□ -1.41
VPS28YPL065W MUS81Q04149 632 aaPredicted RBP6.24□□□□□ -1.41
VPS28YPL065W REH1Q06709 432 aa6.24□□□□□ -1.41
VPS28YPL065W PER1P25625 357 aa6.23□□□□□ -1.41
VPS28YPL065W CUE2P36075 443 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms