RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C YKR015CP36111 568 aa10□□□□□ -0.81
SPT20YOL148C NOP9P47077 666 aaKnown RBP10□□□□□ -0.81
SPT20YOL148C RET3P53600 189 aa10□□□□□ -0.81
SPT20YOL148C NOP15P53927 220 aaPredicted RBP10□□□□□ -0.81
SPT20YOL148C MYO5Q04439 1219 aaKnown RBP10□□□□□ -0.81
SPT20YOL148C RIX7Q07844 837 aaKnown RBP10□□□□□ -0.81
SPT20YOL148C RLP24Q07915 199 aaKnown RBP10□□□□□ -0.81
SPT20YOL148C ACM1Q08981 209 aa10□□□□□ -0.81
SPT20YOL148C MRPL25P23369 157 aa9.99□□□□□ -0.81
SPT20YOL148C RIT1P23796 513 aa9.99□□□□□ -0.81
SPT20YOL148C DPB2P24482 689 aaPredicted RBP9.99□□□□□ -0.81
SPT20YOL148C YKR078WP36158 585 aaKnown RBP9.99□□□□□ -0.81
SPT20YOL148C ETP1P38748 585 aaKnown RBP9.99□□□□□ -0.81
SPT20YOL148C ASE1P50275 885 aa9.99□□□□□ -0.81
SPT20YOL148C YNL247WP53852 767 aaKnown RBP9.99□□□□□ -0.81
SPT20YOL148C DMA2P53924 522 aa9.99□□□□□ -0.81
SPT20YOL148C PPM1Q04081 328 aa9.99□□□□□ -0.81
SPT20YOL148C SXM1Q04175 944 aaKnown RBP9.99□□□□□ -0.81
SPT20YOL148C INM2Q05533 292 aa9.99□□□□□ -0.81
SPT20YOL148C GET4Q12125 312 aa9.99□□□□□ -0.81
SPT20YOL148C TRM11Q12463 433 aa9.99□□□□□ -0.81
SPT20YOL148C TRP2P00899 507 aaKnown RBP9.98□□□□□ -0.81
SPT20YOL148C SEC63P14906 663 aa9.98□□□□□ -0.81
SPT20YOL148C PTC3P34221 468 aaKnown RBP9.98□□□□□ -0.81
SPT20YOL148C PSY2P40164 858 aa9.98□□□□□ -0.81
SPT20YOL148C SQS1P53866 767 aaKnown RBP9.98□□□□□ -0.81
SPT20YOL148C ACL4Q03771 387 aa9.98□□□□□ -0.81
SPT20YOL148C ADY4Q05955 493 aa9.98□□□□□ -0.81
SPT20YOL148C VHS3Q08438 674 aa9.98□□□□□ -0.81
SPT20YOL148C CDC53Q12018 815 aaKnown RBP9.98□□□□□ -0.81
SPT20YOL148C YAK1P14680 807 aa9.98□□□□□ -0.81
SPT20YOL148C CKA2P19454 339 aa9.98□□□□□ -0.81
SPT20YOL148C ISY1P21374 235 aaPredicted RBP9.98□□□□□ -0.81
SPT20YOL148C ATO2P32907 282 aa9.98□□□□□ -0.81
SPT20YOL148C KTR2P33550 425 aa9.98□□□□□ -0.81
SPT20YOL148C DBP7P36120 742 aaKnown RBP9.98□□□□□ -0.81
SPT20YOL148C BCH2P36122 765 aa9.98□□□□□ -0.81
SPT20YOL148C PBP2P38151 413 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
SPT20YOL148C ATG32P40458 529 aa9.98□□□□□ -0.81
SPT20YOL148C SDS3P40505 327 aa9.98□□□□□ -0.81
SPT20YOL148C YIR042CP40586 236 aa9.98□□□□□ -0.81
SPT20YOL148C TFG1P41895 735 aaPredicted RBP9.98□□□□□ -0.81
SPT20YOL148C SHE4P51534 789 aa9.98□□□□□ -0.81
SPT20YOL148C SMD2Q06217 110 aaKnown RBP9.98□□□□□ -0.81
SPT20YOL148C NGR1P32831 672 aaKnown RBP9.97□□□□□ -0.81
SPT20YOL148C SPL2P38839 148 aa9.97□□□□□ -0.81
SPT20YOL148C SPC72P39723 622 aa9.97□□□□□ -0.81
SPT20YOL148C TDA5Q06417 326 aaKnown RBP9.97□□□□□ -0.81
SPT20YOL148C GRE2Q12068 342 aaKnown RBP9.97□□□□□ -0.81
SPT20YOL148C FRD1P32614 470 aaKnown RBP9.96□□□□□ -0.81
SPT20YOL148C SER1P33330 395 aaKnown RBP9.96□□□□□ -0.81
SPT20YOL148C SAS3P34218 831 aa9.96□□□□□ -0.81
SPT20YOL148C YKL050CP35736 922 aa9.96□□□□□ -0.81
SPT20YOL148C HES1P35843 434 aa9.96□□□□□ -0.81
SPT20YOL148C STN1P38960 494 aa9.96□□□□□ -0.81
SPT20YOL148C TMA20P89886 181 aaPredicted RBP9.96□□□□□ -0.81
SPT20YOL148C CLB2P24869 491 aa9.96□□□□□ -0.82
SPT20YOL148C MRM1P25270 412 aa9.96□□□□□ -0.82
SPT20YOL148C TRM2P33753 639 aa9.96□□□□□ -0.82
SPT20YOL148C VHC1P38329 1120 aa9.96□□□□□ -0.82
SPT20YOL148C HIS2P38635 335 aa9.96□□□□□ -0.82
SPT20YOL148C PET100P38958 111 aa9.96□□□□□ -0.82
SPT20YOL148C EMP47P43555 445 aa9.96□□□□□ -0.82
SPT20YOL148C VMA10P48836 114 aaKnown RBP9.96□□□□□ -0.82
SPT20YOL148C USE1P53146 245 aa9.96□□□□□ -0.82
SPT20YOL148C YGR016WP53209 190 aa9.96□□□□□ -0.82
SPT20YOL148C CBK1P53894 756 aa9.96□□□□□ -0.82
SPT20YOL148C TIM11P81449 96 aaPredicted RBP9.96□□□□□ -0.82
SPT20YOL148C PTA1Q01329 785 aaPredicted RBP9.96□□□□□ -0.82
SPT20YOL148C BOI1P38041 980 aaKnown RBP9.95□□□□□ -0.82
SPT20YOL148C RRT2P38332 387 aa9.95□□□□□ -0.82
SPT20YOL148C YHL050CP38721 697 aa9.95□□□□□ -0.82
SPT20YOL148C UBP5P39944 805 aa9.95□□□□□ -0.82
SPT20YOL148C CAB2P40506 365 aa9.95□□□□□ -0.82
SPT20YOL148C SYG1P40528 902 aa9.95□□□□□ -0.82
SPT20YOL148C DSE4P53753 1117 aa9.95□□□□□ -0.82
SPT20YOL148C DSL1P53847 754 aa9.95□□□□□ -0.82
SPT20YOL148C UBX4P54730 416 aa9.95□□□□□ -0.82
SPT20YOL148C ADE12P80210 433 aaKnown RBP9.95□□□□□ -0.82
SPT20YOL148C MUB1Q03162 620 aa9.95□□□□□ -0.82
SPT20YOL148C HEM3P28789 327 aa9.94□□□□□ -0.82
SPT20YOL148C YKL133CP36066 463 aa9.94□□□□□ -0.82
SPT20YOL148C PPS1P38148 807 aa9.94□□□□□ -0.82
SPT20YOL148C END3P39013 349 aa9.94□□□□□ -0.82
SPT20YOL148C CCT3P39077 534 aaKnown RBP9.94□□□□□ -0.82
SPT20YOL148C BIM1P40013 344 aa9.94□□□□□ -0.82
SPT20YOL148C DIM1P41819 318 aaKnown RBP9.94□□□□□ -0.82
SPT20YOL148C MIG2P53035 382 aa9.94□□□□□ -0.82
SPT20YOL148C DRN1P53255 507 aaKnown RBP9.94□□□□□ -0.82
SPT20YOL148C OSH6Q02201 448 aa9.94□□□□□ -0.82
SPT20YOL148C RSM24Q03976 319 aa9.94□□□□□ -0.82
SPT20YOL148C YDR179W-AQ03983 463 aa9.94□□□□□ -0.82
SPT20YOL148C CSM3Q04659 317 aa9.94□□□□□ -0.82
SPT20YOL148C TSR2Q06672 205 aaKnown RBP9.94□□□□□ -0.82
SPT20YOL148C MDM20Q12387 796 aaKnown RBP9.94□□□□□ -0.82
SPT20YOL148C SUP45P12385 437 aaKnown RBP9.93□□□□□ -0.82
SPT20YOL148C COY1P34237 679 aa9.93□□□□□ -0.82
SPT20YOL148C MSG5P38590 489 aa9.93□□□□□ -0.82
SPT20YOL148C UTP22P53254 1237 aaPredicted RBP9.93□□□□□ -0.82
SPT20YOL148C RAT1Q02792 1006 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms