RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	ATG33	Q06485	197 aa		6.2	□□□□□ -1.42
HRT1	YOL133W	LAS17	Q12446	633 aa		6.2	□□□□□ -1.42
HRT1	YOL133W	YGR161W-C	Q3E744	92 aa		6.2	□□□□□ -1.42
HRT1	YOL133W	RPS9A	O13516	197 aa	Known RBP	6.19	□□□□□ -1.42
HRT1	YOL133W	HMG1	P12683	1054 aa		6.19	□□□□□ -1.42
HRT1	YOL133W	SFL1	P20134	766 aa		6.19	□□□□□ -1.42
HRT1	YOL133W	TOD6	P34219	525 aa		6.19	□□□□□ -1.42
HRT1	YOL133W	SET5	P38890	526 aa	Known RBP	6.19	□□□□□ -1.42
HRT1	YOL133W	PLB1	P39105	664 aa		6.19	□□□□□ -1.42
HRT1	YOL133W	ALY2	P47029	1046 aa		6.19	□□□□□ -1.42
HRT1	YOL133W	YOR352W	Q08816	343 aa		6.19	□□□□□ -1.42
HRT1	YOL133W	SEC21	P32074	935 aa	Known RBP	6.18	□□□□□ -1.42
HRT1	YOL133W	EXG2	P52911	562 aa		6.18	□□□□□ -1.42
HRT1	YOL133W	ZIP2	P53061	704 aa		6.18	□□□□□ -1.42
HRT1	YOL133W	GPG1	P53130	126 aa		6.18	□□□□□ -1.42
HRT1	YOL133W	NPC2	Q12408	173 aa		6.18	□□□□□ -1.42
HRT1	YOL133W	YLR149C	Q99296	730 aa		6.18	□□□□□ -1.42
HRT1	YOL133W	DIF1	O13577	133 aa		6.17	□□□□□ -1.42
HRT1	YOL133W	GRX4	P32642	244 aa		6.17	□□□□□ -1.42
HRT1	YOL133W	YHR078W	P38799	552 aa		6.17	□□□□□ -1.42
HRT1	YOL133W	ERG5	P54781	538 aa		6.17	□□□□□ -1.42
HRT1	YOL133W	ASM4	Q05166	528 aa		6.17	□□□□□ -1.42
HRT1	YOL133W	PRC1	P00729	532 aa		6.16	□□□□□ -1.42
HRT1	YOL133W	RPP2A	P05319	106 aa	Known RBP	6.16	□□□□□ -1.42
HRT1	YOL133W	CRP1	P38845	465 aa	Known RBP	6.16	□□□□□ -1.42
HRT1	YOL133W	AIM14	P53109	570 aa		6.16	□□□□□ -1.42
HRT1	YOL133W	ASI2	P53895	289 aa		6.16	□□□□□ -1.42
HRT1	YOL133W	SED4	P25365	1065 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	CCR4	P31384	837 aa	Known RBP	6.15	□□□□□ -1.42
HRT1	YOL133W	FLR1	P38124	548 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	MSS4	P38994	779 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	BNA2	P47125	453 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	YGL081W	P53156	320 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	NHX1	Q04121	633 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	GUP2	Q08929	609 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	Q0142	Q9ZZW4	58 aa		6.15	□□□□□ -1.42
HRT1	YOL133W	KAR4	P25583	335 aa		6.14	□□□□□ -1.43
HRT1	YOL133W	SFP1	P32432	683 aa		6.14	□□□□□ -1.43
HRT1	YOL133W	SSY5	P47002	699 aa		6.14	□□□□□ -1.43
HRT1	YOL133W	PUS2	P53167	370 aa		6.14	□□□□□ -1.43
HRT1	YOL133W	CLU1	Q03690	1277 aa	Known RBP	6.14	□□□□□ -1.43
HRT1	YOL133W	MUS81	Q04149	632 aa	Predicted RBP	6.14	□□□□□ -1.43
HRT1	YOL133W	TMA10	Q06177	86 aa		6.14	□□□□□ -1.43
HRT1	YOL133W	THI73	Q07904	523 aa		6.14	□□□□□ -1.43
HRT1	YOL133W	STE11	P23561	717 aa		6.13	□□□□□ -1.43
HRT1	YOL133W	YKR051W	P36142	418 aa		6.13	□□□□□ -1.43
HRT1	YOL133W	BUL1	P48524	976 aa		6.13	□□□□□ -1.43
HRT1	YOL133W	UBC9	P50623	157 aa	Predicted RBP	6.13	□□□□□ -1.43
HRT1	YOL133W	GIN4	Q12263	1142 aa		6.13	□□□□□ -1.43
HRT1	YOL133W	DCG1	P32460	244 aa		6.12	□□□□□ -1.43
HRT1	YOL133W	SAP190	P36123	1033 aa		6.12	□□□□□ -1.43
HRT1	YOL133W	UBP5	P39944	805 aa		6.12	□□□□□ -1.43
HRT1	YOL133W	PFA3	P42836	336 aa		6.12	□□□□□ -1.43
HRT1	YOL133W	YJR096W	P47137	282 aa		6.12	□□□□□ -1.43
HRT1	YOL133W	SDA1	P53313	767 aa	Known RBP	6.12	□□□□□ -1.43
HRT1	YOL133W	YLR358C	O13565	187 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.11	□□□□□ -1.43	not detected
HRT1	YOL133W	HSL7	P38274	827 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	RPN10	P38886	268 aa	Known RBP	6.11	□□□□□ -1.43
HRT1	YOL133W	SHR5	P41912	237 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	HLJ1	P48353	224 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	MRPS35	P53292	345 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	ARP4	P80428	489 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	CRR1	Q05790	422 aa		6.11	□□□□□ -1.43
HRT1	YOL133W	YKR018C	P36114	725 aa		6.1	□□□□□ -1.43
HRT1	YOL133W	SAK1	P38990	1142 aa		6.1	□□□□□ -1.43
HRT1	YOL133W	VHR1	P40522	640 aa		6.1	□□□□□ -1.43
HRT1	YOL133W	UME1	Q03010	460 aa		6.1	□□□□□ -1.43
HRT1	YOL133W	MTQ2	Q03920	221 aa	Predicted RBP	6.1	□□□□□ -1.43
HRT1	YOL133W	ENB1	Q08299	606 aa		6.1	□□□□□ -1.43
HRT1	YOL133W	PMA1	P05030	918 aa	Known RBP	6.09	□□□□□ -1.43
HRT1	YOL133W	TYS1	P36421	394 aa	Known RBP	6.09	□□□□□ -1.43
HRT1	YOL133W	GPP1	P41277	250 aa	Known RBP	6.09	□□□□□ -1.43
HRT1	YOL133W	TAF1	P46677	1066 aa		6.09	□□□□□ -1.43
HRT1	YOL133W	PMT3	P47190	753 aa		6.09	□□□□□ -1.43
HRT1	YOL133W	MNN10	P50108	393 aa	Known RBP	6.09	□□□□□ -1.43
HRT1	YOL133W	GUD1	Q07729	489 aa		6.09	□□□□□ -1.43
HRT1	YOL133W	DCS2	Q12123	353 aa		6.09	□□□□□ -1.43
HRT1	YOL133W	CTS1	P29029	562 aa		6.08	□□□□□ -1.44
HRT1	YOL133W	CTF13	P35203	478 aa		6.08	□□□□□ -1.44
HRT1	YOL133W	SIC1	P38634	284 aa		6.08	□□□□□ -1.44
HRT1	YOL133W	MIP6	P38760	659 aa	Known RBP	6.08	□□□□□ -1.44
HRT1	YOL133W	CKB2	P38930	258 aa		6.08	□□□□□ -1.44
HRT1	YOL133W	YEN1	P40028	759 aa		6.08	□□□□□ -1.44
HRT1	YOL133W	NPY1	P53164	384 aa		6.08	□□□□□ -1.44
HRT1	YOL133W	YLR415C	O13578	112 aa		6.07	□□□□□ -1.44
HRT1	YOL133W	GID8	P40208	455 aa		6.07	□□□□□ -1.44
HRT1	YOL133W	YGR237C	P50089	785 aa		6.07	□□□□□ -1.44
HRT1	YOL133W	MCM6	P53091	1017 aa	Known RBP	6.07	□□□□□ -1.44
HRT1	YOL133W	LEE1	Q02799	301 aa	Known RBP	6.07	□□□□□ -1.44
HRT1	YOL133W	PEX19	Q07418	342 aa		6.07	□□□□□ -1.44
HRT1	YOL133W	TSR4	P25040	408 aa		6.06	□□□□□ -1.44
HRT1	YOL133W	MNN4	P36044	1178 aa		6.06	□□□□□ -1.44
HRT1	YOL133W	PZF1	P39933	429 aa		6.06	□□□□□ -1.44
HRT1	YOL133W	IRC24	P40580	263 aa		6.06	□□□□□ -1.44
HRT1	YOL133W	PCL10	P53124	433 aa		6.06	□□□□□ -1.44
HRT1	YOL133W	BRE5	P53741	515 aa	Known RBP	6.06	□□□□□ -1.44
HRT1	YOL133W	RPN7	Q06103	429 aa	Known RBP	6.06	□□□□□ -1.44
HRT1	YOL133W	ESC8	Q08119	714 aa		6.06	□□□□□ -1.44
HRT1	YOL133W	SWM1	Q12379	170 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms