RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	CAB3	P36076	571 aa		4.88	□□□□□ -1.63
TRM11	YOL124C	RTS1	P38903	757 aa		4.88	□□□□□ -1.63
TRM11	YOL124C	SEC26	P41810	973 aa	Known RBP	4.88	□□□□□ -1.63
TRM11	YOL124C	TRM44	Q02648	567 aa	Known RBP	4.88	□□□□□ -1.63
TRM11	YOL124C	PCL8	Q08966	492 aa		4.88	□□□□□ -1.63
TRM11	YOL124C	WHI5	Q12416	295 aa		4.88	□□□□□ -1.63
TRM11	YOL124C	THS1	P04801	734 aa	Known RBP	4.87	□□□□□ -1.63
TRM11	YOL124C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
TRM11	YOL124C	VPS35	P34110	944 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	MYO3	P36006	1272 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	EBP2	P36049	427 aa	Known RBP	4.87	□□□□□ -1.63
TRM11	YOL124C	OPY1	P38271	328 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	PEX28	P38848	579 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	VPS4	P52917	437 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	SKG3	Q06315	1026 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	SPN1	Q06505	410 aa	Predicted RBP	4.87	□□□□□ -1.63
TRM11	YOL124C	YPL260W	Q08977	551 aa		4.87	□□□□□ -1.63
TRM11	YOL124C	CHO2	P05374	869 aa	Known RBP	4.86	□□□□□ -1.63
TRM11	YOL124C	HPR1	P17629	752 aa	Known RBP	4.86	□□□□□ -1.63
TRM11	YOL124C	SEC20	P28791	383 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	DOM34	P33309	386 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	TRM2	P33753	639 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	RDH54	P38086	958 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	PES4	P39684	611 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	TNA1	P53322	534 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	RPS15	Q01855	142 aa	Known RBP	4.86	□□□□□ -1.63
TRM11	YOL124C	ULP1	Q02724	621 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	RAD61	Q99359	647 aa		4.86	□□□□□ -1.63
TRM11	YOL124C	TUS1	Q06412	1307 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	MATALPHA2	P0CY08	210 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	HMLALPHA2	P0CY09	210 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	PCT1	P13259	424 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	RAD53	P22216	821 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	RER2	P35196	286 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	BAP2	P38084	609 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	RRP8	P38961	392 aa	Known RBP	4.85	□□□□□ -1.63
TRM11	YOL124C	PEA2	P40091	420 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	SNU71	P53207	620 aa	Known RBP	4.85	□□□□□ -1.63
TRM11	YOL124C	HOS3	Q02959	697 aa	Known RBP	4.85	□□□□□ -1.63
TRM11	YOL124C	RSB1	Q08417	382 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	KEL3	Q08979	651 aa	Predicted RBP	4.85	□□□□□ -1.63
TRM11	YOL124C	CSR2	Q12734	1121 aa		4.85	□□□□□ -1.63
TRM11	YOL124C	CYC1	P00044	109 aa	Predicted RBP	4.84	□□□□□ -1.63
TRM11	YOL124C	PHO4	P07270	312 aa	Known RBP	4.84	□□□□□ -1.63
TRM11	YOL124C	SRM1	P21827	482 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	PRE8	P23639	250 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	MET4	P32389	672 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	ANP1	P32629	500 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	PIK1	P39104	1066 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	VID27	P40157	782 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	MYO5	Q04439	1219 aa	Known RBP	4.84	□□□□□ -1.63
TRM11	YOL124C	DAL4	Q04895	635 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	YLR407W	Q06070	228 aa		4.84	□□□□□ -1.63
TRM11	YOL124C	LSP1	Q12230	341 aa	Known RBP	4.84	□□□□□ -1.63
TRM11	YOL124C	FKS1	P38631	1876 aa	Known RBP	4.84	□□□□□ -1.64
TRM11	YOL124C	CBP1	P07252	654 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	KIP1	P28742	1111 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	PRO3	P32263	286 aa	Known RBP	4.83	□□□□□ -1.64
TRM11	YOL124C	YHL017W	P38745	532 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	KEL1	P38853	1164 aa	Known RBP	4.83	□□□□□ -1.64
TRM11	YOL124C	YGL140C	P53120	1219 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	MRD1	Q06106	887 aa	Known RBP	4.83	□□□□□ -1.64
TRM11	YOL124C	EST2	Q06163	884 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	TFC6	Q06339	672 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	RCL1	Q08096	367 aa	Predicted RBP	4.83	□□□□□ -1.64
TRM11	YOL124C	PUS9	Q12069	462 aa		4.83	□□□□□ -1.64
TRM11	YOL124C	PGA3	Q12746	312 aa	Known RBP	4.83	□□□□□ -1.64
TRM11	YOL124C	PMA1	P05030	918 aa	Known RBP	4.82	□□□□□ -1.64
TRM11	YOL124C	CBP3	P21560	335 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	MAK31	P23059	88 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	IMP2'	P32351	346 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	UGA4	P32837	571 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	CST26	P38226	397 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	TIF4631	P39935	952 aa	Known RBP	4.82	□□□□□ -1.64
TRM11	YOL124C	RPN3	P40016	523 aa	Known RBP	4.82	□□□□□ -1.64
TRM11	YOL124C	YIL089W	P40500	205 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	HDA1	P53973	706 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	PSK2	Q08217	1101 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	OXR1	Q08952	273 aa		4.82	□□□□□ -1.64
TRM11	YOL124C	CLF1	Q12309	687 aa	Predicted RBP	4.82	□□□□□ -1.64
TRM11	YOL124C	RNR3	P21672	869 aa	Known RBP	4.81	□□□□□ -1.64
TRM11	YOL124C	STE11	P23561	717 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	RIT1	P23796	513 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	CHS3	P29465	1165 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	ALG2	P43636	503 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	NPA3	P47122	385 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	MSE1	P48525	536 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	YKE2	P52553	114 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	RRT6	P53117	311 aa	Predicted RBP	4.81	□□□□□ -1.64
TRM11	YOL124C	ADI1	Q03677	179 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	RSM24	Q03976	319 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	VPS20	Q04272	221 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	DUS4	Q06063	367 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	YDL124W	Q07551	312 aa	Known RBP	4.81	□□□□□ -1.64
TRM11	YOL124C	YPL150W	Q12152	901 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	PTC5	Q12511	572 aa		4.81	□□□□□ -1.64
TRM11	YOL124C	SEC23	P15303	768 aa	Known RBP	4.8	□□□□□ -1.64
TRM11	YOL124C	SRP54	P20424	541 aa	Known RBP	4.8	□□□□□ -1.64
TRM11	YOL124C	HEM3	P28789	327 aa		4.8	□□□□□ -1.64
TRM11	YOL124C	ASF1	P32447	279 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 143.8 ms