RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUS1	YMR240C	OAF1	P39720	1047 aa	Predicted RBP	5.76	□□□□□ -1.49
CUS1	YMR240C	SDP1	P40479	209 aa		5.76	□□□□□ -1.49
CUS1	YMR240C	URM1	P40554	99 aa	Predicted RBP	5.76	□□□□□ -1.49
CUS1	YMR240C	DUG1	P43616	481 aa	Known RBP	5.76	□□□□□ -1.49
CUS1	YMR240C	UBC9	P50623	157 aa	Predicted RBP	5.76	□□□□□ -1.49
CUS1	YMR240C	PLB2	Q03674	706 aa		5.76	□□□□□ -1.49
CUS1	YMR240C	CRR1	Q05790	422 aa		5.76	□□□□□ -1.49
CUS1	YMR240C	TRE2	Q08693	809 aa		5.76	□□□□□ -1.49
CUS1	YMR240C	GLT1	Q12680	2145 aa	Known RBP	5.76	□□□□□ -1.49
CUS1	YMR240C	LAM1	P38851	1228 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	YFL052W	P43551	465 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	LSB3	P43603	459 aa	Known RBP	5.75	□□□□□ -1.49
CUS1	YMR240C	RET2	P43621	546 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	MET12	P46151	657 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	PEX8	P53248	589 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	COG6	P53959	839 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	RPN7	Q06103	429 aa	Known RBP	5.75	□□□□□ -1.49
CUS1	YMR240C	YOR352W	Q08816	343 aa		5.75	□□□□□ -1.49
CUS1	YMR240C	YKR051W	P36142	418 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	CCT5	P40413	562 aa	Known RBP	5.74	□□□□□ -1.49
CUS1	YMR240C	MNN11	P46985	422 aa	Known RBP	5.74	□□□□□ -1.49
CUS1	YMR240C	RTS3	P53289	263 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	UPC2	Q12151	913 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	LIP5	P32875	414 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	DID4	P36108	232 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	YKR018C	P36114	725 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	FLR1	P38124	548 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	TDA3	P38758	523 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	NIT1	P40447	199 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	ROT1	Q03691	256 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	DFG16	Q99234	619 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	YLR149C	Q99296	730 aa		5.74	□□□□□ -1.49
CUS1	YMR240C	HIS5	P07172	385 aa		5.73	□□□□□ -1.49
CUS1	YMR240C	YHR078W	P38799	552 aa		5.73	□□□□□ -1.49
CUS1	YMR240C	YGR153W	P48238	217 aa		5.73	□□□□□ -1.49
CUS1	YMR240C	INP52	P50942	1183 aa		5.73	□□□□□ -1.49
CUS1	YMR240C	GTF1	P53260	183 aa	Predicted RBP	5.73	□□□□□ -1.49
CUS1	YMR240C	WHI4	Q07655	649 aa	Known RBP	5.73	□□□□□ -1.49
CUS1	YMR240C	YOL057W	Q08225	711 aa		5.73	□□□□□ -1.49
CUS1	YMR240C	YPL277C	Q08989	487 aa		5.73	□□□□□ -1.49
CUS1	YMR240C	CDC6	P09119	513 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	STE14	P32584	239 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	OMA1	P36163	345 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	MEF2	P39677	819 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	CHA4	P43634	648 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	SSY5	P47002	699 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	MRPL22	P53881	309 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	ECM9	Q02202	377 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	DUS4	Q06063	367 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	HMI1	Q12039	706 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	TMA7	Q3E764	64 aa	Known RBP	5.72	□□□□□ -1.49
CUS1	YMR240C	Q0142	Q9ZZW4	58 aa		5.72	□□□□□ -1.49
CUS1	YMR240C	AEP2	P22136	580 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	SED4	P25365	1065 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	POL12	P38121	705 aa	Predicted RBP	5.71	□□□□□ -1.5
CUS1	YMR240C	NIT2	P47016	307 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	ECL1	P48235	211 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	PEX14	P53112	341 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	PCL10	P53124	433 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	VPS62	P53285	467 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	GCN5	Q03330	439 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	GPB1	Q08886	897 aa		5.71	□□□□□ -1.5
CUS1	YMR240C	MAL31	P38156	614 aa		5.7	□□□□□ -1.5
CUS1	YMR240C	GPP2	P40106	250 aa	Known RBP	5.7	□□□□□ -1.5
CUS1	YMR240C	TPM2	P40414	161 aa		5.7	□□□□□ -1.5
CUS1	YMR240C	GCV2	P49095	1034 aa		5.7	□□□□□ -1.5
CUS1	YMR240C	NCS6	P53088	359 aa		5.7	□□□□□ -1.5
CUS1	YMR240C	YDR132C	Q03900	495 aa		5.7	□□□□□ -1.5
CUS1	YMR240C	RXT3	Q07458	294 aa		5.7	□□□□□ -1.5
CUS1	YMR240C	EMC1	P25574	760 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	PLC1	P32383	869 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	MNN4	P36044	1178 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	MIP6	P38760	659 aa	Known RBP	5.69	□□□□□ -1.5
CUS1	YMR240C	HXT6	P39003	570 aa	Known RBP	5.69	□□□□□ -1.5
CUS1	YMR240C	HXT7	P39004	570 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	NOP12	Q08208	459 aa	Known RBP	5.69	□□□□□ -1.5
CUS1	YMR240C	HFI1	Q12060	488 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	DCS2	Q12123	353 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	RMP1	Q12530	201 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	APM4	Q99186	491 aa		5.69	□□□□□ -1.5
CUS1	YMR240C	LRG1	P35688	1017 aa		5.68	□□□□□ -1.5
CUS1	YMR240C	SAK1	P38990	1142 aa		5.68	□□□□□ -1.5
CUS1	YMR240C	PZF1	P39933	429 aa		5.68	□□□□□ -1.5
CUS1	YMR240C	YJR039W	P47107	1121 aa		5.68	□□□□□ -1.5
CUS1	YMR240C	MTR3	P48240	250 aa	Predicted RBP	5.68	□□□□□ -1.5
CUS1	YMR240C	ACK1	Q07622	623 aa	Predicted RBP	5.68	□□□□□ -1.5
CUS1	YMR240C	GPR1	Q12361	961 aa		5.68	□□□□□ -1.5
CUS1	YMR240C	CDC20	P26309	610 aa		5.67	□□□□□ -1.5
CUS1	YMR240C	SSZ1	P38788	538 aa	Known RBP	5.67	□□□□□ -1.5
CUS1	YMR240C	ASI2	P53895	289 aa		5.67	□□□□□ -1.5
CUS1	YMR240C	PTA1	Q01329	785 aa	Predicted RBP	5.67	□□□□□ -1.5
CUS1	YMR240C	SND1	Q04007	877 aa		5.67	□□□□□ -1.5
CUS1	YMR240C	MUS81	Q04149	632 aa	Predicted RBP	5.67	□□□□□ -1.5
CUS1	YMR240C	TFC4	P33339	1025 aa		5.66	□□□□□ -1.5
CUS1	YMR240C	OAF3	P36023	863 aa		5.66	□□□□□ -1.5
CUS1	YMR240C	BFA1	P47113	574 aa		5.66	□□□□□ -1.5
CUS1	YMR240C	ORC4	P54791	529 aa		5.66	□□□□□ -1.5
CUS1	YMR240C	TGL2	P54857	326 aa		5.66	□□□□□ -1.5
CUS1	YMR240C	ARP4	P80428	489 aa		5.66	□□□□□ -1.5
CUS1	YMR240C	SKY1	Q03656	742 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms