RNA–Protein interactions for RNA: YMR239C

RNT1, Transcript of Nuclear dsRNA-specific ribonuclease (RNase III), yeast

Gene RNT1, Length 1,416 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNT1	YMR239C	TLG1	Q03322	224 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	YPR071W	Q12346	211 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	YRF1-1	P0CX20	1796 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	YRF1-5	P0CX21	1796 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	YRF1-8	P0CX22	1796 aa		4.18	□□□□□ -1.74
RNT1	YMR239C	HBS1	P32769	611 aa	Known RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	CHS7	P38843	316 aa		4.17	□□□□□ -1.74
RNT1	YMR239C	SIT1	P39980	628 aa		4.17	□□□□□ -1.74
RNT1	YMR239C	URM1	P40554	99 aa	Predicted RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	YJL049W	P47048	450 aa		4.17	□□□□□ -1.74
RNT1	YMR239C	CCM1	P48237	864 aa	Predicted RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	ECM16	Q04217	1267 aa	Known RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	LCD1	Q04377	747 aa		4.17	□□□□□ -1.74
RNT1	YMR239C	YDL124W	Q07551	312 aa	Known RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	CDC53	Q12018	815 aa	Known RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	IKI3	Q06706	1349 aa	Known RBP	4.17	□□□□□ -1.74
RNT1	YMR239C	TY1B-BR	Q12193	1756 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	TY1B-GR3	Q12316	1755 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	TY1B-OR	Q92393	1755 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	SRB8	P25648	1427 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	NOT3	P06102	836 aa	Known RBP	4.16	□□□□□ -1.74
RNT1	YMR239C	SCT1	P32784	759 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	BYE1	P36106	594 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	HUL4	P40985	892 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	ENB1	Q08299	606 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	HIF1	Q12373	385 aa		4.16	□□□□□ -1.74
RNT1	YMR239C	MYO4	P32492	1471 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	TOM70	P07213	617 aa	Known RBP	4.15	□□□□□ -1.74
RNT1	YMR239C	SED4	P25365	1065 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	KAR4	P25583	335 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	TOA1	P32773	286 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	REC104	P33323	182 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	TOK1	P40310	691 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	NNF1	P47149	201 aa		4.15	□□□□□ -1.74
RNT1	YMR239C	UTP8	P53276	713 aa	Known RBP	4.15	□□□□□ -1.74
RNT1	YMR239C	PDR10	P51533	1564 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	RPS9A	O13516	197 aa	Known RBP	4.14	□□□□□ -1.75
RNT1	YMR239C	CIT1	P00890	479 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	MSD1	P15179	658 aa	Known RBP	4.14	□□□□□ -1.75
RNT1	YMR239C	RAD53	P22216	821 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	AFR1	P33304	620 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	RRP14	P36080	434 aa	Known RBP	4.14	□□□□□ -1.75
RNT1	YMR239C	BRN1	P38170	754 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	CEP3	P40969	608 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	HUL5	P53119	910 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	GUP2	Q08929	609 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	FLC1	Q08967	793 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	HBN1	Q96VH4	193 aa		4.14	□□□□□ -1.75
RNT1	YMR239C	EFT1	P32324	842 aa	Known RBP	4.13	□□□□□ -1.75
RNT1	YMR239C	DJP1	P40564	432 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	YIR014W	P40570	242 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	PUS2	P53167	370 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	SUB1	P54000	292 aa	Known RBP	4.13	□□□□□ -1.75
RNT1	YMR239C	UPC2	Q12151	913 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	LAS17	Q12446	633 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	YOR131C	Q12486	218 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	EDE1	P34216	1381 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	TRM3	Q07527	1436 aa		4.13	□□□□□ -1.75
RNT1	YMR239C	PET111	P08468	800 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	SRP54	P20424	541 aa	Known RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	PET10	P36139	283 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	MED8	P38304	223 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	SUL1	P38359	859 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	NIT3	P49954	291 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	PAP2	P53632	584 aa	Known RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
RNT1	YMR239C	BMS1	Q08965	1183 aa	Known RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	YLR419W	Q06698	1435 aa	Known RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	TOP3	P13099	656 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	GAL11	P19659	1081 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	RPD3	P32561	433 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	SRP40	P32583	406 aa	Predicted RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	STE13	P33894	931 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	SAP190	P36123	1033 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	CHZ1	P40019	153 aa	Predicted RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	YIL108W	P40483	696 aa	Known RBP	4.12	□□□□□ -1.75
RNT1	YMR239C	UBA2	P52488	636 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	BDF2	Q07442	638 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	PPM2	Q08282	695 aa		4.12	□□□□□ -1.75
RNT1	YMR239C	MPH2	P0CD99	609 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	URA1	P28272	314 aa	Predicted RBP	4.11	□□□□□ -1.75
RNT1	YMR239C	DEP1	P31385	405 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	SWI3	P32591	825 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	TYE7	P33122	291 aa	Predicted RBP	4.11	□□□□□ -1.75
RNT1	YMR239C	YKL091C	P33324	310 aa	Known RBP	4.11	□□□□□ -1.75
RNT1	YMR239C	OAR1	P35731	278 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	MOH1	P38191	138 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	YHR020W	P38708	688 aa	Known RBP	4.11	□□□□□ -1.75
RNT1	YMR239C	ECM1	P39715	212 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	BNR1	P40450	1375 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	SNM1	P40993	198 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	ATG36	P46983	293 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RNT1	YMR239C	MAK10	Q02197	733 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	SSL1	Q04673	461 aa	Predicted RBP	4.11	□□□□□ -1.75
RNT1	YMR239C	YLR040C	Q07988	224 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	APL5	Q08951	932 aa	Known RBP	4.11	□□□□□ -1.75
RNT1	YMR239C	GIN4	Q12263	1142 aa		4.11	□□□□□ -1.75
RNT1	YMR239C	DOP1	Q03921	1698 aa		4.1	□□□□□ -1.75
RNT1	YMR239C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms