RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR400W	YLR400W	YJR008W	P47085	338 aa		4.27	□□□□□ -1.73
YLR400W	YLR400W	UTP8	P53276	713 aa	Known RBP	4.27	□□□□□ -1.73
YLR400W	YLR400W	TAF8	Q03750	510 aa		4.27	□□□□□ -1.73
YLR400W	YLR400W	UTP14	Q04500	899 aa	Known RBP	4.27	□□□□□ -1.73
YLR400W	YLR400W	FRE5	Q08908	694 aa		4.27	□□□□□ -1.73
YLR400W	YLR400W	SWM1	Q12379	170 aa		4.27	□□□□□ -1.73
YLR400W	YLR400W	TRM11	Q12463	433 aa		4.27	□□□□□ -1.73
YLR400W	YLR400W	YGR161W-C	Q3E744	92 aa		4.27	□□□□□ -1.73
YLR400W	YLR400W	GAL11	P19659	1081 aa		4.26	□□□□□ -1.73
YLR400W	YLR400W	PRP9	P19736	530 aa	Known RBP	4.26	□□□□□ -1.73
YLR400W	YLR400W	HSP60	P19882	572 aa	Known RBP	4.26	□□□□□ -1.73
YLR400W	YLR400W	PRP4	P20053	465 aa	Known RBP	4.26	□□□□□ -1.73
YLR400W	YLR400W	URA1	P28272	314 aa	Predicted RBP	4.26	□□□□□ -1.73
YLR400W	YLR400W	THI4	P32318	326 aa		4.26	□□□□□ -1.73
YLR400W	YLR400W	MTH1	P35198	433 aa		4.26	□□□□□ -1.73
YLR400W	YLR400W	DNM1	P54861	757 aa		4.26	□□□□□ -1.73
YLR400W	YLR400W	OSH2	Q12451	1283 aa		4.26	□□□□□ -1.73
YLR400W	YLR400W	NOP14	Q99207	810 aa	Known RBP	4.26	□□□□□ -1.73
YLR400W	YLR400W	MSH2	P25847	964 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	BET3	P36149	193 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	PPS1	P38148	807 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	YHR078W	P38799	552 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	ALR2	P43553	858 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	MAL11	P53048	616 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	MRPS35	P53292	345 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	GND2	P53319	492 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	TIM44	Q01852	431 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	DLT1	Q04216	342 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	HBN1	Q96VH4	193 aa		4.25	□□□□□ -1.73
YLR400W	YLR400W	CDC11	P32458	415 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	RPP1	P38786	293 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	ELO3	P40319	345 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	ZDS1	P50111	915 aa	Known RBP	4.24	□□□□□ -1.73
YLR400W	YLR400W	ERP6	P53198	216 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	RTS3	P53289	263 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	EAF1	Q06337	982 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	NTG2	Q08214	380 aa		4.24	□□□□□ -1.73
YLR400W	YLR400W	MET3	P08536	511 aa		4.23	□□□□□ -1.73
YLR400W	YLR400W	RPL8A	P17076	256 aa	Known RBP	4.23	□□□□□ -1.73
YLR400W	YLR400W	PET10	P36139	283 aa		4.23	□□□□□ -1.73
YLR400W	YLR400W	VHR1	P40522	640 aa		4.23	□□□□□ -1.73
YLR400W	YLR400W	FKH2	P41813	862 aa		4.23	□□□□□ -1.73
YLR400W	YLR400W	YNR029C	P53729	429 aa	Known RBP	4.23	□□□□□ -1.73
YLR400W	YLR400W	ADY4	Q05955	493 aa		4.23	□□□□□ -1.73
YLR400W	YLR400W	ENV7	Q12003	364 aa		4.23	□□□□□ -1.73
YLR400W	YLR400W	RPS9A	O13516	197 aa	Known RBP	4.22	□□□□□ -1.73
YLR400W	YLR400W	CAF20	P12962	161 aa	Known RBP	4.22	□□□□□ -1.73
YLR400W	YLR400W	ARE1	P25628	610 aa		4.22	□□□□□ -1.73
YLR400W	YLR400W	CYS3	P31373	394 aa	Known RBP	4.22	□□□□□ -1.73
YLR400W	YLR400W	ENP1	P38333	483 aa	Known RBP	4.22	□□□□□ -1.73
YLR400W	YLR400W	CRP1	P38845	465 aa	Known RBP	4.22	□□□□□ -1.73
YLR400W	YLR400W	YEN1	P40028	759 aa		4.22	□□□□□ -1.73
YLR400W	YLR400W	MUP1	P50276	574 aa		4.22	□□□□□ -1.73
YLR400W	YLR400W	MPH2	P0CD99	609 aa		4.21	□□□□□ -1.74
YLR400W	YLR400W	MSD1	P15179	658 aa	Known RBP	4.21	□□□□□ -1.74
YLR400W	YLR400W	YHL017W	P38745	532 aa		4.21	□□□□□ -1.74
YLR400W	YLR400W	HUL4	P40985	892 aa		4.21	□□□□□ -1.74
YLR400W	YLR400W	ASI2	P53895	289 aa		4.21	□□□□□ -1.74
YLR400W	YLR400W	HAL9	Q12180	1030 aa		4.21	□□□□□ -1.74
YLR400W	YLR400W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YLR400W	YLR400W	SCT1	P32784	759 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	GDH3	P39708	457 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	NUG1	P40010	520 aa	Known RBP	4.2	□□□□□ -1.74
YLR400W	YLR400W	SDS3	P40505	327 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
YLR400W	YLR400W	PUS2	P53167	370 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	DUS1	P53759	423 aa	Known RBP	4.2	□□□□□ -1.74
YLR400W	YLR400W	UGO1	Q03327	502 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	MUS81	Q04149	632 aa	Predicted RBP	4.2	□□□□□ -1.74
YLR400W	YLR400W	ADR1	P07248	1323 aa		4.2	□□□□□ -1.74
YLR400W	YLR400W	TOP3	P13099	656 aa		4.19	□□□□□ -1.74
YLR400W	YLR400W	YBR053C	P38235	358 aa		4.19	□□□□□ -1.74
YLR400W	YLR400W	ATF1	P40353	525 aa		4.19	□□□□□ -1.74
YLR400W	YLR400W	NOG2	P53742	486 aa	Known RBP	4.19	□□□□□ -1.74
YLR400W	YLR400W	HBT1	Q07653	1046 aa	Known RBP	4.19	□□□□□ -1.74
YLR400W	YLR400W	DAL7	P21826	554 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	MEF1	P25039	761 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	PEX6	P33760	1030 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	PZF1	P39933	429 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	DAS1	P47005	663 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	HSV2	P50079	448 aa	Predicted RBP	4.18	□□□□□ -1.74
YLR400W	YLR400W	AMA1	P50082	593 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	TFB2	Q02939	513 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	PKH1	Q03407	766 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	MRH1	Q12117	320 aa	Predicted RBP	4.18	□□□□□ -1.74
YLR400W	YLR400W	MDM12	Q92328	271 aa		4.18	□□□□□ -1.74
YLR400W	YLR400W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
YLR400W	YLR400W	YCL002C	P25565	263 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	SAK1	P38990	1142 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	SSY5	P47002	699 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	YDL124W	Q07551	312 aa	Known RBP	4.17	□□□□□ -1.74
YLR400W	YLR400W	YLR001C	Q07895	862 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	YOL057W	Q08225	711 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	YOR022C	Q12204	715 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	SUT2	Q12286	268 aa		4.17	□□□□□ -1.74
YLR400W	YLR400W	YLR415C	O13578	112 aa		4.16	□□□□□ -1.74
YLR400W	YLR400W	MRC1	P25588	1096 aa		4.16	□□□□□ -1.74
YLR400W	YLR400W	CUE2	P36075	443 aa	Known RBP	4.16	□□□□□ -1.74
YLR400W	YLR400W	UBP6	P43593	499 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms