RNA–Protein interactions for RNA: YLR313C

SPH1, Transcript of Protein involved in shmoo formation and bipolar bud site selection, yeast

Gene SPH1, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPH1	YLR313C	RPN10	P38886	268 aa	Known RBP	4.6	□□□□□ -1.67
SPH1	YLR313C	YAP6	Q03935	383 aa		4.6	□□□□□ -1.67
SPH1	YLR313C	CRR1	Q05790	422 aa		4.6	□□□□□ -1.67
SPH1	YLR313C	TYS1	P36421	394 aa	Known RBP	4.59	□□□□□ -1.67
SPH1	YLR313C	SDP1	P40479	209 aa		4.59	□□□□□ -1.67
SPH1	YLR313C	UBC9	P50623	157 aa	Predicted RBP	4.59	□□□□□ -1.67
SPH1	YLR313C	CDA2	Q06703	312 aa		4.59	□□□□□ -1.67
SPH1	YLR313C	GUD1	Q07729	489 aa		4.59	□□□□□ -1.67
SPH1	YLR313C	UPC2	Q12151	913 aa		4.59	□□□□□ -1.67
SPH1	YLR313C	GIN4	Q12263	1142 aa		4.59	□□□□□ -1.67
SPH1	YLR313C	RPS13	P05756	151 aa	Known RBP	4.58	□□□□□ -1.68
SPH1	YLR313C	HIS5	P07172	385 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	GAS1	P22146	559 aa	Known RBP	4.58	□□□□□ -1.68
SPH1	YLR313C	STE14	P32584	239 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	YKR051W	P36142	418 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	DOT6	P40059	670 aa	Known RBP	4.58	□□□□□ -1.68
SPH1	YLR313C	YJR096W	P47137	282 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	RXT3	Q07458	294 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	YLR149C	Q99296	730 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	Q0142	Q9ZZW4	58 aa		4.58	□□□□□ -1.68
SPH1	YLR313C	RPP2A	P05319	106 aa	Known RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	CCR4	P31384	837 aa	Known RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	AIM3	P38266	947 aa	Known RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	HSL7	P38274	827 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	CHA4	P43634	648 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	ZIP2	P53061	704 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	NCS6	P53088	359 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	MTQ2	Q03920	221 aa	Predicted RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	ACK1	Q07622	623 aa	Predicted RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	NOP12	Q08208	459 aa	Known RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	YPL277C	Q08989	487 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	FAP7	Q12055	197 aa	Predicted RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	CDC20	P26309	610 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	PRP19	P32523	503 aa	Known RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	YHR078W	P38799	552 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	GPP1	P41277	250 aa	Known RBP	4.57	□□□□□ -1.68
SPH1	YLR313C	SPT20	P50875	604 aa		4.57	□□□□□ -1.68
SPH1	YLR313C	SOD2	P00447	233 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	SED4	P25365	1065 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	CKB2	P38930	258 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	YFL052W	P43551	465 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	SSY5	P47002	699 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	BNA2	P47125	453 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	NPY1	P53164	384 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	NPC2	Q12408	173 aa		4.56	□□□□□ -1.68
SPH1	YLR313C	PRP43	P53131	767 aa	Known RBP	4.55	□□□□□ -1.68
SPH1	YLR313C	YLR224W	Q05947	369 aa		4.55	□□□□□ -1.68
SPH1	YLR313C	RPN7	Q06103	429 aa	Known RBP	4.55	□□□□□ -1.68
SPH1	YLR313C	GPR1	Q12361	961 aa		4.55	□□□□□ -1.68
SPH1	YLR313C	KCS1	Q12494	1050 aa		4.55	□□□□□ -1.68
SPH1	YLR313C	TUB3	P09734	445 aa	Known RBP	4.54	□□□□□ -1.68
SPH1	YLR313C	SEC21	P32074	935 aa	Known RBP	4.54	□□□□□ -1.68
SPH1	YLR313C	TOM20	P35180	183 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	YKR018C	P36114	725 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	FLR1	P38124	548 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	PAF1	P38351	445 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	SLU7	Q02775	382 aa	Known RBP	4.54	□□□□□ -1.68
SPH1	YLR313C	HFD1	Q04458	532 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	ASM4	Q05166	528 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	TMA17	Q12513	150 aa		4.54	□□□□□ -1.68
SPH1	YLR313C	PRP6	P19735	899 aa	Predicted RBP	4.53	□□□□□ -1.68
SPH1	YLR313C	PRP4	P20053	465 aa	Known RBP	4.53	□□□□□ -1.68
SPH1	YLR313C	SAK1	P38990	1142 aa		4.53	□□□□□ -1.68
SPH1	YLR313C	MSS4	P38994	779 aa		4.53	□□□□□ -1.68
SPH1	YLR313C	PLB1	P39105	664 aa		4.53	□□□□□ -1.68
SPH1	YLR313C	YJR120W	P47157	116 aa		4.53	□□□□□ -1.68
SPH1	YLR313C	RIM8	P53179	542 aa		4.53	□□□□□ -1.68
SPH1	YLR313C	ASI2	P53895	289 aa		4.53	□□□□□ -1.68
SPH1	YLR313C	RNQ1	P25367	405 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	TOD6	P34219	525 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	MNN4	P36044	1178 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	NIT1	P40447	199 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	VHR1	P40522	640 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	PFA3	P42836	336 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	ARP4	P80428	489 aa		4.53	□□□□□ -1.69
SPH1	YLR313C	MUS81	Q04149	632 aa	Predicted RBP	4.53	□□□□□ -1.69
SPH1	YLR313C	LST4	P34239	828 aa		4.52	□□□□□ -1.69
SPH1	YLR313C	OAF1	P39720	1047 aa	Predicted RBP	4.52	□□□□□ -1.69
SPH1	YLR313C	GZF3	P42944	551 aa	Known RBP	4.52	□□□□□ -1.69
SPH1	YLR313C	RET2	P43621	546 aa		4.52	□□□□□ -1.69
SPH1	YLR313C	YGR153W	P48238	217 aa		4.52	□□□□□ -1.69
SPH1	YLR313C	MTR3	P48240	250 aa	Predicted RBP	4.52	□□□□□ -1.69
SPH1	YLR313C	PCL10	P53124	433 aa		4.52	□□□□□ -1.69
SPH1	YLR313C	FOL1	P53848	824 aa		4.52	□□□□□ -1.69
SPH1	YLR313C	YTM1	Q12024	460 aa	Predicted RBP	4.52	□□□□□ -1.69
SPH1	YLR313C	DCS2	Q12123	353 aa		4.52	□□□□□ -1.69
SPH1	YLR313C	MRC1	P25588	1096 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	EUG1	P32474	517 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	ELM1	P32801	640 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	TDA3	P38758	523 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	PZF1	P39933	429 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	AVT1	P47082	602 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	TMA10	Q06177	86 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	SWM1	Q12379	170 aa		4.51	□□□□□ -1.69
SPH1	YLR313C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
SPH1	YLR313C	KAR4	P25583	335 aa		4.5	□□□□□ -1.69
SPH1	YLR313C	THI80	P35202	319 aa		4.5	□□□□□ -1.69
SPH1	YLR313C	MIP6	P38760	659 aa	Known RBP	4.5	□□□□□ -1.69
SPH1	YLR313C	CCT5	P40413	562 aa	Known RBP	4.5	□□□□□ -1.69
SPH1	YLR313C	IRC24	P40580	263 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms