RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W KCS1Q12494 1050 aa1.46□□□□□ -2.18
PRP16YKR086W YLR358CO13565 187 aa1.45□□□□□ -2.18
PRP16YKR086W EMC1P25574 760 aa1.45□□□□□ -2.18
PRP16YKR086W HBS1P32769 611 aaKnown RBP1.45□□□□□ -2.18
PRP16YKR086W ECM21P38167 1117 aaKnown RBP1.45□□□□□ -2.18
PRP16YKR086W YBR184WP38299 523 aa1.45□□□□□ -2.18
PRP16YKR086W YFL052WP43551 465 aa1.45□□□□□ -2.18
PRP16YKR086W TAN1P53072 289 aaPredicted RBP1.45□□□□□ -2.18
PRP16YKR086W HUL5P53119 910 aa1.45□□□□□ -2.18
PRP16YKR086W SUN4P53616 420 aa1.45□□□□□ -2.18
PRP16YKR086W YLR224WQ05947 369 aa1.45□□□□□ -2.18
PRP16YKR086W TRM13Q12383 476 aa1.45□□□□□ -2.18
PRP16YKR086W RKM4Q12504 494 aa1.45□□□□□ -2.18
PRP16YKR086W PRC1P00729 532 aa1.45□□□□□ -2.18
PRP16YKR086W GRX1P25373 110 aaKnown RBP1.45□□□□□ -2.18
PRP16YKR086W PIN4P34217 668 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
PRP16YKR086W PAM1P37304 830 aaKnown RBP1.45□□□□□ -2.18
PRP16YKR086W MSS4P38994 779 aa1.45□□□□□ -2.18
PRP16YKR086W PEA2P40091 420 aa1.45□□□□□ -2.18
PRP16YKR086W YSP2Q06681 1438 aa1.45□□□□□ -2.18
PRP16YKR086W AGP1P25376 633 aa1.45□□□□□ -2.18
PRP16YKR086W RRP14P36080 434 aaKnown RBP1.45□□□□□ -2.18
PRP16YKR086W VBA5P36172 582 aa1.45□□□□□ -2.18
PRP16YKR086W GUS1P46655 708 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
PRP16YKR086W ERP6P53198 216 aa1.45□□□□□ -2.18
PRP16YKR086W GPB1Q08886 897 aa1.45□□□□□ -2.18
PRP16YKR086W GSC2P40989 1895 aa1.45□□□□□ -2.18
PRP16YKR086W ERT1P38140 529 aa1.44□□□□□ -2.18
PRP16YKR086W YIL108WP40483 696 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W SFB2P53953 876 aa1.44□□□□□ -2.18
PRP16YKR086W WHI4Q07655 649 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W TPO1Q07824 586 aa1.44□□□□□ -2.18
PRP16YKR086W CIT1P00890 479 aa1.44□□□□□ -2.18
PRP16YKR086W HIS5P07172 385 aa1.44□□□□□ -2.18
PRP16YKR086W TUB3P09734 445 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W PRP4P20053 465 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W PER1P25625 357 aa1.44□□□□□ -2.18
PRP16YKR086W PLB1P39105 664 aa1.44□□□□□ -2.18
PRP16YKR086W SIT1P39980 628 aa1.44□□□□□ -2.18
PRP16YKR086W YER158CP40095 573 aa1.44□□□□□ -2.18
PRP16YKR086W TY4A-JP47023 414 aa1.44□□□□□ -2.18
PRP16YKR086W ALY2P47029 1046 aa1.44□□□□□ -2.18
PRP16YKR086W MRPS35P53292 345 aa1.44□□□□□ -2.18
PRP16YKR086W GIS1Q03833 894 aa1.44□□□□□ -2.18
PRP16YKR086W UPC2Q12151 913 aa1.44□□□□□ -2.18
PRP16YKR086W GCN2P15442 1659 aa1.44□□□□□ -2.18
PRP16YKR086W MET6P05694 767 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W RAD53P22216 821 aa1.44□□□□□ -2.18
PRP16YKR086W SBA1P28707 216 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W PBY1P38254 753 aa1.44□□□□□ -2.18
PRP16YKR086W PBP1P53297 722 aaKnown RBP1.44□□□□□ -2.18
PRP16YKR086W SHE9Q04172 456 aa1.44□□□□□ -2.18
PRP16YKR086W TMA10Q06177 86 aa1.44□□□□□ -2.18
PRP16YKR086W CIT2P08679 460 aa1.43□□□□□ -2.18
PRP16YKR086W GSY1P23337 708 aa1.43□□□□□ -2.18
PRP16YKR086W PMI40P29952 429 aaKnown RBP1.43□□□□□ -2.18
PRP16YKR086W YHR020WP38708 688 aaKnown RBP1.43□□□□□ -2.18
PRP16YKR086W MPT5P39016 859 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
PRP16YKR086W FAF1P40546 346 aaPredicted RBP1.43□□□□□ -2.18
PRP16YKR086W MNN10P50108 393 aaKnown RBP1.43□□□□□ -2.18
PRP16YKR086W YDR514CQ04408 483 aa1.43□□□□□ -2.18
PRP16YKR086W YOL098CQ12496 1037 aa1.43□□□□□ -2.18
PRP16YKR086W TAD3Q9URQ3 322 aa1.43□□□□□ -2.18
PRP16YKR086W NUP145P49687 1317 aa1.43□□□□□ -2.18
PRP16YKR086W SEC15P22224 910 aa1.43□□□□□ -2.18
PRP16YKR086W FUN30P31380 1131 aa1.43□□□□□ -2.18
PRP16YKR086W YKR075CP36155 307 aa1.43□□□□□ -2.18
PRP16YKR086W RPN10P38886 268 aaKnown RBP1.43□□□□□ -2.18
PRP16YKR086W HLJ1P48353 224 aa1.43□□□□□ -2.18
PRP16YKR086W URB1P34241 1764 aaKnown RBP1.43□□□□□ -2.18
PRP16YKR086W NUP192P47054 1683 aa1.42□□□□□ -2.18
PRP16YKR086W STI1P15705 589 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
PRP16YKR086W KAR4P25583 335 aa1.42□□□□□ -2.18
PRP16YKR086W TRM2P33753 639 aa1.42□□□□□ -2.18
PRP16YKR086W SPF1P39986 1215 aaKnown RBP1.42□□□□□ -2.18
PRP16YKR086W GYP7P48365 746 aa1.42□□□□□ -2.18
PRP16YKR086W RXT3Q07458 294 aa1.42□□□□□ -2.18
PRP16YKR086W SSF2Q12153 453 aaPredicted RBP1.42□□□□□ -2.18
PRP16YKR086W NOT3P06102 836 aaKnown RBP1.42□□□□□ -2.18
PRP16YKR086W SPE1P08432 466 aa1.42□□□□□ -2.18
PRP16YKR086W PHO8P11491 566 aa1.42□□□□□ -2.18
PRP16YKR086W SED4P25365 1065 aa1.42□□□□□ -2.18
PRP16YKR086W MSE1P48525 536 aa1.42□□□□□ -2.18
PRP16YKR086W MCM6P53091 1017 aaKnown RBP1.42□□□□□ -2.18
PRP16YKR086W YGR012WP53206 393 aa1.42□□□□□ -2.18
PRP16YKR086W CTF4Q01454 927 aa1.42□□□□□ -2.18
PRP16YKR086W RSC3Q06639 885 aa1.42□□□□□ -2.18
PRP16YKR086W YLR040CQ07988 224 aa1.42□□□□□ -2.18
PRP16YKR086W POM152P39685 1337 aa1.42□□□□□ -2.18
PRP16YKR086W TSC11P40061 1430 aa1.42□□□□□ -2.18
PRP16YKR086W HCM1P25364 564 aa1.42□□□□□ -2.18
PRP16YKR086W HIS7P33734 552 aaKnown RBP1.42□□□□□ -2.18
PRP16YKR086W UBS1P38290 277 aa1.42□□□□□ -2.18
PRP16YKR086W GGA2P38817 585 aaKnown RBP1.42□□□□□ -2.18
PRP16YKR086W YBP2P53169 641 aa1.42□□□□□ -2.18
PRP16YKR086W SSL1Q04673 461 aaPredicted RBP1.42□□□□□ -2.18
PRP16YKR086W GSF2Q04697 403 aaKnown RBP1.42□□□□□ -2.18
PRP16YKR086W NPC2Q12408 173 aa1.42□□□□□ -2.18
PRP16YKR086W GEA1P47102 1408 aaPredicted RBP1.41□□□□□ -2.18
PRP16YKR086W DIF1O13577 133 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms