RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	MET32	Q12041	191 aa		7.44	□□□□□ -1.22
TIF1	YKR059W	SST2	P11972	698 aa	Known RBP	7.43	□□□□□ -1.22
TIF1	YKR059W	TOP3	P13099	656 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	MET22	P32179	357 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	RPN12	P32496	274 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	RGD1	P38339	666 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	RIM4	P38741	713 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	MGS1	P40151	587 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	GPG1	P53130	126 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	LSC2	P53312	427 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	HEH2	Q03281	663 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	SPO71	Q03868	1245 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	LCB5	Q06147	687 aa	Known RBP	7.43	□□□□□ -1.22
TIF1	YKR059W	LAP2	Q10740	671 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	GNT1	Q12096	491 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	YPL066W	Q12194	479 aa		7.43	□□□□□ -1.22
TIF1	YKR059W	PIF1	P07271	859 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	RPA135	P22138	1203 aa	Known RBP	7.42	□□□□□ -1.22
TIF1	YKR059W	CDC60	P26637	1090 aa	Known RBP	7.42	□□□□□ -1.22
TIF1	YKR059W	PET10	P36139	283 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	ARL1	P38116	183 aa	Known RBP	7.42	□□□□□ -1.22
TIF1	YKR059W	VAB2	P40003	282 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	YFL040W	P43562	540 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	VPS62	P53285	467 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	UTP5	Q04177	643 aa	Known RBP	7.42	□□□□□ -1.22
TIF1	YKR059W	YDL144C	Q07589	356 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	YLR001C	Q07895	862 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	PCL8	Q08966	492 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	ICL2	Q12031	575 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	CFT2	Q12102	859 aa	Predicted RBP	7.42	□□□□□ -1.22
TIF1	YKR059W	YPR071W	Q12346	211 aa		7.42	□□□□□ -1.22
TIF1	YKR059W	PMA1	P05030	918 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	PGI1	P12709	554 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	MSD1	P15179	658 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	IDI1	P15496	288 aa		7.41	□□□□□ -1.22
TIF1	YKR059W	AFT1	P22149	690 aa		7.41	□□□□□ -1.22
TIF1	YKR059W	ADP1	P25371	1049 aa		7.41	□□□□□ -1.22
TIF1	YKR059W	MRPL16	P38064	232 aa		7.41	□□□□□ -1.22
TIF1	YKR059W	GPP1	P41277	250 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	SEC26	P41810	973 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	SRP1	Q02821	542 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	FMP30	Q02883	468 aa		7.41	□□□□□ -1.22
TIF1	YKR059W	DUS3	Q06053	668 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	BRE1	Q07457	700 aa	Known RBP	7.41	□□□□□ -1.22
TIF1	YKR059W	MPD2	Q99316	277 aa		7.41	□□□□□ -1.22
TIF1	YKR059W	RPP0	P05317	312 aa	Known RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	RPS19A	P07280	144 aa	Known RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	RPS19B	P07281	144 aa	Predicted RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	SRD1	P09007	221 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	RAD18	P10862	487 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	PRP19	P32523	503 aa	Known RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	AMN1	P38285	549 aa	Predicted RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	HSE1	P38753	452 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	NEO1	P40527	1151 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	MPH1	P40562	993 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	LYS14	P40971	790 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.4	□□□□□ -1.22	not detected
TIF1	YKR059W	PTK2	P47116	818 aa	Known RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	BIO5	P53744	561 aa	Known RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	YNR063W	P53749	607 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	MTQ2	Q03920	221 aa	Predicted RBP	7.4	□□□□□ -1.22
TIF1	YKR059W	ENT2	Q05785	613 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	PTC5	Q12511	572 aa		7.4	□□□□□ -1.22
TIF1	YKR059W	MLS1	P30952	554 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	RAD24	P32641	659 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	TFC4	P33339	1025 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	ALG3	P38179	458 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	SIT1	P39980	628 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	MXR1	P40029	184 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	LSB6	P42951	607 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	PIP2	P52960	996 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	LCD1	Q04377	747 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	COG8	Q04632	607 aa		7.39	□□□□□ -1.23
TIF1	YKR059W	YTM1	Q12024	460 aa	Predicted RBP	7.39	□□□□□ -1.23
TIF1	YKR059W	CYB2	P00175	591 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-LR4	P0C2I8	440 aa	Known RBP	7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-DR6	P0CX70	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-ER1	P0CX71	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-LR2	P0CX72	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-PL	P0CX73	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-JR1	P0CX74	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-LR3	P0CX75	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-ML2	P0CX76	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	AEP2	P22136	580 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	PTP2	P29461	750 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	SWC3	P31376	625 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	PLC1	P32383	869 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	RPT3	P33298	428 aa	Known RBP	7.38	□□□□□ -1.23
TIF1	YKR059W	MCD4	P36051	919 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	YRO2	P38079	344 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	NEM1	P38757	446 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	LEM3	P42838	414 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	ESF2	P53743	316 aa	Known RBP	7.38	□□□□□ -1.23
TIF1	YKR059W	YNR065C	P53751	1116 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	GUD1	Q07729	489 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	YIG1	Q08956	461 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-GR1	Q12085	440 aa		7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	7.38	□□□□□ -1.23
TIF1	YKR059W	TY1A-OL	Q92392	440 aa	Known RBP	7.38	□□□□□ -1.23
TIF1	YKR059W	CDC9	P04819	755 aa		7.37	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms