RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C MPT5P39016 859 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
PEX1YKL197C EDC3P39998 551 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82 RIP-Chip
PEX1YKL197C ECM23Q02710 187 aa3.67□□□□□ -1.82
PEX1YKL197C RAT1Q02792 1006 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C FMP30Q02883 468 aa3.67□□□□□ -1.82
PEX1YKL197C CWC15Q03772 175 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C PLP1Q04004 230 aa3.67□□□□□ -1.82
PEX1YKL197C TY1A-MR1Q04215 440 aa3.67□□□□□ -1.82
PEX1YKL197C RRP6Q12149 733 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C YMR084WA2P2R3 262 aa3.67□□□□□ -1.82
PEX1YKL197C NOT3P06102 836 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C STE3P06783 470 aa3.67□□□□□ -1.82
PEX1YKL197C CKA2P19454 339 aa3.67□□□□□ -1.82
PEX1YKL197C PMA2P19657 947 aa3.67□□□□□ -1.82
PEX1YKL197C NGR1P32831 672 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
PEX1YKL197C MRPL40P36534 297 aa3.67□□□□□ -1.82
PEX1YKL197C CCL1P37366 393 aa3.67□□□□□ -1.82
PEX1YKL197C BAP2P38084 609 aa3.67□□□□□ -1.82
PEX1YKL197C YEN1P40028 759 aa3.67□□□□□ -1.82
PEX1YKL197C MMM1P41800 426 aa3.67□□□□□ -1.82
PEX1YKL197C RET2P43621 546 aa3.67□□□□□ -1.82
PEX1YKL197C MIG2P53035 382 aa3.67□□□□□ -1.82
PEX1YKL197C HST1P53685 503 aa3.67□□□□□ -1.82
PEX1YKL197C YPL062WQ02781 134 aa3.67□□□□□ -1.82
PEX1YKL197C ARP9Q05123 467 aa3.67□□□□□ -1.82
PEX1YKL197C TSR2Q06672 205 aaKnown RBP3.67□□□□□ -1.82
PEX1YKL197C PIN2Q12057 282 aa3.67□□□□□ -1.82
PEX1YKL197C PDR18P53756 1333 aa3.67□□□□□ -1.82
PEX1YKL197C PGI1P12709 554 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C KAR9P32526 644 aa3.66□□□□□ -1.82
PEX1YKL197C YME2P32843 850 aa3.66□□□□□ -1.82
PEX1YKL197C UBC6P33296 250 aaPredicted RBP3.66□□□□□ -1.82
PEX1YKL197C RIB7P33312 244 aa3.66□□□□□ -1.82
PEX1YKL197C DUR3P33413 735 aa3.66□□□□□ -1.82
PEX1YKL197C YKL023WP36103 277 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C PEX32P38292 413 aa3.66□□□□□ -1.82
PEX1YKL197C RTS1P38903 757 aa3.66□□□□□ -1.82
PEX1YKL197C SAP155P43612 1002 aa3.66□□□□□ -1.82
PEX1YKL197C SAP4P53036 818 aa3.66□□□□□ -1.82
PEX1YKL197C BET4Q00618 327 aa3.66□□□□□ -1.82
PEX1YKL197C CEG1Q01159 459 aaPredicted RBP3.66□□□□□ -1.82
PEX1YKL197C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
PEX1YKL197C VPS36Q06696 566 aa3.66□□□□□ -1.82
PEX1YKL197C KGD2P19262 463 aaPredicted RBP3.66□□□□□ -1.82
PEX1YKL197C XRS2P33301 854 aa3.66□□□□□ -1.82
PEX1YKL197C MTW1P39731 289 aa3.66□□□□□ -1.82
PEX1YKL197C ROG3P43602 733 aa3.66□□□□□ -1.82
PEX1YKL197C BNA6P43619 295 aa3.66□□□□□ -1.82
PEX1YKL197C APS3P47064 194 aa3.66□□□□□ -1.82
PEX1YKL197C ATP22P50273 684 aaPredicted RBP3.66□□□□□ -1.82
PEX1YKL197C YNL144CP53907 740 aa3.66□□□□□ -1.82
PEX1YKL197C CAB1Q04430 367 aa3.66□□□□□ -1.82
PEX1YKL197C ESC2Q06340 456 aa3.66□□□□□ -1.82
PEX1YKL197C RTC5Q12108 567 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C STB3Q12427 513 aa3.66□□□□□ -1.82
PEX1YKL197C RAD4P14736 754 aa3.66□□□□□ -1.82
PEX1YKL197C WHI3P34761 661 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C YKL222CP35995 705 aa3.66□□□□□ -1.82
PEX1YKL197C YHR020WP38708 688 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C GEM1P39722 662 aa3.66□□□□□ -1.82
PEX1YKL197C NOP16P40007 231 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C SEC28P40509 296 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C SNX4P47057 423 aa3.66□□□□□ -1.82
PEX1YKL197C COG6P53959 839 aa3.66□□□□□ -1.82
PEX1YKL197C ULP1Q02724 621 aa3.66□□□□□ -1.82
PEX1YKL197C SYF1Q04048 859 aaPredicted RBP3.66□□□□□ -1.82
PEX1YKL197C MLH2Q07980 695 aa3.66□□□□□ -1.82
PEX1YKL197C ESC8Q08119 714 aa3.66□□□□□ -1.82
PEX1YKL197C NEW1Q08972 1196 aaKnown RBP3.66□□□□□ -1.82
PEX1YKL197C REC8Q12188 680 aa3.66□□□□□ -1.82
PEX1YKL197C HAT1Q12341 374 aa3.66□□□□□ -1.82
PEX1YKL197C SRF1Q12516 437 aa3.66□□□□□ -1.82
PEX1YKL197C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
PEX1YKL197C SPS1P08458 490 aa3.65□□□□□ -1.82
PEX1YKL197C MET4P32389 672 aa3.65□□□□□ -1.82
PEX1YKL197C PPQ1P32945 549 aa3.65□□□□□ -1.82
PEX1YKL197C TOK1P40310 691 aa3.65□□□□□ -1.82
PEX1YKL197C DAK2P43550 591 aa3.65□□□□□ -1.82
PEX1YKL197C LOC1P43586 204 aaPredicted RBP3.65□□□□□ -1.82
PEX1YKL197C TRF5P48561 642 aaKnown RBP3.65□□□□□ -1.82
PEX1YKL197C CAF120P53836 1060 aa3.65□□□□□ -1.82
PEX1YKL197C BUL2Q03758 920 aaKnown RBP3.65□□□□□ -1.82
PEX1YKL197C LOT6Q07923 191 aa3.65□□□□□ -1.82
PEX1YKL197C GAS4Q08271 471 aa3.65□□□□□ -1.82
PEX1YKL197C BUD7Q08754 746 aa3.65□□□□□ -1.82
PEX1YKL197C NOT5Q12514 560 aaPredicted RBP3.65□□□□□ -1.82
PEX1YKL197C YKL068W-AQ3E826 78 aa3.65□□□□□ -1.82
PEX1YKL197C MPD2Q99316 277 aa3.65□□□□□ -1.82
PEX1YKL197C HAP4P14064 554 aa3.65□□□□□ -1.83
PEX1YKL197C DPB3P27344 201 aa3.65□□□□□ -1.83
PEX1YKL197C YKL100CP34248 587 aa3.65□□□□□ -1.83
PEX1YKL197C JNM1P36224 373 aa3.65□□□□□ -1.83
PEX1YKL197C ALG14P38242 237 aa3.65□□□□□ -1.83
PEX1YKL197C POP2P39008 433 aa3.65□□□□□ -1.83
PEX1YKL197C ALD5P40047 520 aaKnown RBP3.65□□□□□ -1.83
PEX1YKL197C INA22P40576 216 aa3.65□□□□□ -1.83
PEX1YKL197C MDE1P47095 244 aa3.65□□□□□ -1.83
PEX1YKL197C ORM1P53224 222 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms