RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C NAM7P30771 971 aaKnown RBP3.9□□□□□ -1.78
VPS53YJL029C SEC21P32074 935 aaKnown RBP3.9□□□□□ -1.78
VPS53YJL029C TRM2P33753 639 aa3.9□□□□□ -1.78
VPS53YJL029C PIH1P38768 344 aa3.9□□□□□ -1.78
VPS53YJL029C YHR054CP38780 354 aa3.9□□□□□ -1.78
VPS53YJL029C YER186CP40101 306 aa3.9□□□□□ -1.78
VPS53YJL029C LSB6P42951 607 aa3.9□□□□□ -1.78
VPS53YJL029C YFL034WP43564 1073 aa3.9□□□□□ -1.78
VPS53YJL029C GUP1P53154 560 aa3.9□□□□□ -1.78
VPS53YJL029C NOP13P53883 403 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
VPS53YJL029C ARK1P53974 638 aa3.9□□□□□ -1.78
VPS53YJL029C HRQ1Q05549 1077 aa3.9□□□□□ -1.78
VPS53YJL029C RLP24Q07915 199 aaKnown RBP3.9□□□□□ -1.78
VPS53YJL029C SGT2Q12118 346 aaKnown RBP3.9□□□□□ -1.78
VPS53YJL029C MNL2Q12205 849 aa3.9□□□□□ -1.78
VPS53YJL029C COX4P04037 155 aa3.9□□□□□ -1.79
VPS53YJL029C SSB1P11484 613 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C RGP1P16664 663 aa3.9□□□□□ -1.79
VPS53YJL029C RAM1P22007 431 aa3.9□□□□□ -1.79
VPS53YJL029C GCD11P32481 527 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C YKT6P36015 200 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C YKL023WP36103 277 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C PET10P36139 283 aa3.9□□□□□ -1.79
VPS53YJL029C PGM2P37012 569 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C RIM4P38741 713 aa3.9□□□□□ -1.79
VPS53YJL029C SSB2P40150 613 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C SCD6P45978 349 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
VPS53YJL029C INP52P50942 1183 aa3.9□□□□□ -1.79
VPS53YJL029C TAM41P53230 385 aa3.9□□□□□ -1.79
VPS53YJL029C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
VPS53YJL029C TRS130Q03660 1102 aa3.9□□□□□ -1.79
VPS53YJL029C COG8Q04632 607 aa3.9□□□□□ -1.79
VPS53YJL029C PIG1Q06216 648 aa3.9□□□□□ -1.79
VPS53YJL029C MRI1Q06489 411 aaKnown RBP3.9□□□□□ -1.79
VPS53YJL029C MED1Q12321 566 aa3.9□□□□□ -1.79
VPS53YJL029C AIM44Q99299 758 aa3.9□□□□□ -1.79
VPS53YJL029C NAT1P12945 854 aaKnown RBP3.89□□□□□ -1.79
VPS53YJL029C MBR1P23493 339 aa3.89□□□□□ -1.79
VPS53YJL029C RSA4P25382 515 aaKnown RBP3.89□□□□□ -1.79
VPS53YJL029C ADK2P26364 225 aa3.89□□□□□ -1.79
VPS53YJL029C ENV11P53246 860 aa3.89□□□□□ -1.79
VPS53YJL029C HST2P53686 357 aa3.89□□□□□ -1.79
VPS53YJL029C YOR022CQ12204 715 aa3.89□□□□□ -1.79
VPS53YJL029C SCJ1P25303 377 aa3.89□□□□□ -1.79
VPS53YJL029C RFS1P38234 210 aaKnown RBP3.89□□□□□ -1.79
VPS53YJL029C HUL4P40985 892 aa3.89□□□□□ -1.79
VPS53YJL029C DAS1P47005 663 aa3.89□□□□□ -1.79
VPS53YJL029C AVT1P47082 602 aa3.89□□□□□ -1.79
VPS53YJL029C ALG11P53954 548 aaKnown RBP3.89□□□□□ -1.79
VPS53YJL029C DDP1Q99321 188 aaKnown RBP3.89□□□□□ -1.79
VPS53YJL029C LAA1P39526 2014 aa3.89□□□□□ -1.79
VPS53YJL029C PCT1P13259 424 aa3.88□□□□□ -1.79
VPS53YJL029C KGD2P19262 463 aaPredicted RBP3.88□□□□□ -1.79
VPS53YJL029C NUD1P32336 851 aa3.88□□□□□ -1.79
VPS53YJL029C VID24P38263 362 aa3.88□□□□□ -1.79
VPS53YJL029C RGD1P38339 666 aa3.88□□□□□ -1.79
VPS53YJL029C BCD1P38772 366 aa3.88□□□□□ -1.79
VPS53YJL029C FTR1P40088 404 aa3.88□□□□□ -1.79
VPS53YJL029C FIG4P42837 879 aa3.88□□□□□ -1.79
VPS53YJL029C ENT3P47160 408 aa3.88□□□□□ -1.79
VPS53YJL029C CCM1P48237 864 aaPredicted RBP3.88□□□□□ -1.79
VPS53YJL029C YPT11P48559 417 aa3.88□□□□□ -1.79
VPS53YJL029C ASN1P49089 572 aaKnown RBP3.88□□□□□ -1.79
VPS53YJL029C YML083CQ04526 418 aa3.88□□□□□ -1.79
VPS53YJL029C PEX19Q07418 342 aa3.88□□□□□ -1.79
VPS53YJL029C ESC8Q08119 714 aa3.88□□□□□ -1.79
VPS53YJL029C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
VPS53YJL029C PUP1P25043 261 aa3.88□□□□□ -1.79
VPS53YJL029C CCL1P37366 393 aa3.88□□□□□ -1.79
VPS53YJL029C CTM1P38818 585 aa3.88□□□□□ -1.79
VPS53YJL029C ULP2P40537 1034 aaPredicted RBP3.88□□□□□ -1.79
VPS53YJL029C SAD1P43589 448 aa3.88□□□□□ -1.79
VPS53YJL029C FYV8P46949 817 aaKnown RBP3.88□□□□□ -1.79
VPS53YJL029C TOF1P53840 1238 aa3.88□□□□□ -1.79
VPS53YJL029C ADA2Q02336 434 aa3.88□□□□□ -1.79
VPS53YJL029C COG4Q06096 861 aa3.88□□□□□ -1.79
VPS53YJL029C YDL057WQ07379 328 aa3.88□□□□□ -1.79
VPS53YJL029C GIS3Q12418 502 aa3.88□□□□□ -1.79
VPS53YJL029C OSH2Q12451 1283 aa3.88□□□□□ -1.79
VPS53YJL029C TOM70P07213 617 aaKnown RBP3.87□□□□□ -1.79
VPS53YJL029C HMG2P12684 1045 aa3.87□□□□□ -1.79
VPS53YJL029C MET4P32389 672 aa3.87□□□□□ -1.79
VPS53YJL029C CSE2P33308 149 aa3.87□□□□□ -1.79
VPS53YJL029C PPS1P38148 807 aa3.87□□□□□ -1.79
VPS53YJL029C YBR284WP38150 797 aa3.87□□□□□ -1.79
VPS53YJL029C MOB1P40484 314 aa3.87□□□□□ -1.79
VPS53YJL029C COS5P47187 383 aa3.87□□□□□ -1.79
VPS53YJL029C MRX10Q05648 414 aa3.87□□□□□ -1.79
VPS53YJL029C PKH2Q12236 1081 aaKnown RBP3.87□□□□□ -1.79
VPS53YJL029C YPR117WQ06116 2489 aa3.87□□□□□ -1.79
VPS53YJL029C PRC1P00729 532 aa3.87□□□□□ -1.79
VPS53YJL029C GAL80P04387 435 aa3.87□□□□□ -1.79
VPS53YJL029C RAD27P26793 382 aa3.87□□□□□ -1.79
VPS53YJL029C SPT5P27692 1063 aaKnown RBP3.87□□□□□ -1.79
VPS53YJL029C YJU3P28321 313 aa3.87□□□□□ -1.79
VPS53YJL029C CCT5P40413 562 aaKnown RBP3.87□□□□□ -1.79
VPS53YJL029C TAF1P46677 1066 aa3.87□□□□□ -1.79
VPS53YJL029C ORC5P50874 479 aa3.87□□□□□ -1.79
VPS53YJL029C NBP1P52919 319 aaPredicted RBP3.87□□□□□ -1.79
VPS53YJL029C YNL108CP53929 270 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms