RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C SSB1P11484 613 aaKnown RBP14.45□□□□□ -0.1
SHU1YHL006C DSF2P38213 736 aa14.45□□□□□ -0.1
SHU1YHL006C YHR054CP38780 354 aa14.45□□□□□ -0.1
SHU1YHL006C BDH2P39713 417 aa14.45□□□□□ -0.1
SHU1YHL006C SSB2P40150 613 aaKnown RBP14.45□□□□□ -0.1
SHU1YHL006C YKL091CP33324 310 aaKnown RBP14.44□□□□□ -0.1
SHU1YHL006C YBR284WP38150 797 aa14.44□□□□□ -0.1
SHU1YHL006C SIP5P40210 489 aaKnown RBP14.44□□□□□ -0.1
SHU1YHL006C POL31P46957 487 aa14.44□□□□□ -0.1
SHU1YHL006C MED1Q12321 566 aa14.44□□□□□ -0.1
SHU1YHL006C RRD2Q12461 358 aa14.44□□□□□ -0.1
SHU1YHL006C CCH1P50077 2039 aa14.44□□□□□ -0.1
SHU1YHL006C MAS1P10507 462 aa14.43□□□□□ -0.1
SHU1YHL006C SPO11P23179 398 aa14.43□□□□□ -0.1
SHU1YHL006C PGS1P25578 521 aa14.43□□□□□ -0.1
SHU1YHL006C VPH1P32563 840 aaKnown RBP14.43□□□□□ -0.1
SHU1YHL006C SAC6P32599 642 aaKnown RBP14.43□□□□□ -0.1
SHU1YHL006C PIN4P34217 668 aaKnown RBP RIP-Chip data14.43□□□□□ -0.1not detected
SHU1YHL006C UBP5P39944 805 aa14.43□□□□□ -0.1
SHU1YHL006C TOS3P43637 560 aa14.43□□□□□ -0.1
SHU1YHL006C HST1P53685 503 aa14.43□□□□□ -0.1
SHU1YHL006C SGT2Q12118 346 aaKnown RBP14.43□□□□□ -0.1
SHU1YHL006C GAL80P04387 435 aa14.42□□□□□ -0.1
SHU1YHL006C DON1Q05610 365 aa14.42□□□□□ -0.1
SHU1YHL006C MLH2Q07980 695 aa14.42□□□□□ -0.1
SHU1YHL006C BET2P20133 325 aa14.41□□□□□ -0.1
SHU1YHL006C IMG2P25642 146 aaPredicted RBP14.41□□□□□ -0.1
SHU1YHL006C LSC2P53312 427 aa14.41□□□□□ -0.1
SHU1YHL006C TIM8P57744 87 aa14.41□□□□□ -0.1
SHU1YHL006C YOL075CQ08234 1294 aa14.41□□□□□ -0.1
SHU1YHL006C APM4Q99186 491 aa14.41□□□□□ -0.1
SHU1YHL006C DDP1Q99321 188 aaKnown RBP14.41□□□□□ -0.1
SHU1YHL006C CHS2P14180 963 aa14.4□□□□□ -0.1
SHU1YHL006C ELM1P32801 640 aa14.4□□□□□ -0.1
SHU1YHL006C YKT6P36015 200 aaKnown RBP14.4□□□□□ -0.1
SHU1YHL006C RIM4P38741 713 aa14.4□□□□□ -0.1
SHU1YHL006C HYR1P40581 163 aaKnown RBP14.4□□□□□ -0.1
SHU1YHL006C FYV8P46949 817 aaKnown RBP14.4□□□□□ -0.1
SHU1YHL006C DAS1P47005 663 aa14.4□□□□□ -0.1
SHU1YHL006C ADA2Q02336 434 aa14.4□□□□□ -0.1
SHU1YHL006C VMS1Q04311 632 aaKnown RBP14.4□□□□□ -0.1
SHU1YHL006C RPL22AP05749 121 aaKnown RBP14.39□□□□□ -0.11
SHU1YHL006C VPS3P23643 1011 aa14.39□□□□□ -0.11
SHU1YHL006C PEP7P32609 515 aa14.39□□□□□ -0.11
SHU1YHL006C YKL097CP34245 136 aa14.39□□□□□ -0.11
SHU1YHL006C YER130CP39959 443 aa14.39□□□□□ -0.11
SHU1YHL006C CCT5P40413 562 aaKnown RBP14.39□□□□□ -0.11
SHU1YHL006C YPT11P48559 417 aa14.39□□□□□ -0.11
SHU1YHL006C IME1P21190 360 aa14.38□□□□□ -0.11
SHU1YHL006C RLP24Q07915 199 aaKnown RBP14.38□□□□□ -0.11
SHU1YHL006C GPA1P08539 472 aa14.37□□□□□ -0.11
SHU1YHL006C NAT1P12945 854 aaKnown RBP14.37□□□□□ -0.11
SHU1YHL006C KGD2P19262 463 aaPredicted RBP14.37□□□□□ -0.11
SHU1YHL006C PDE1P22434 369 aa14.37□□□□□ -0.11
SHU1YHL006C SLA2P33338 968 aa14.37□□□□□ -0.11
SHU1YHL006C AGP2P38090 596 aa14.37□□□□□ -0.11
SHU1YHL006C FTR1P40088 404 aa14.37□□□□□ -0.11
SHU1YHL006C SLG1P54867 378 aa14.37□□□□□ -0.11
SHU1YHL006C PML39Q03760 334 aa14.37□□□□□ -0.11
SHU1YHL006C YDR344CQ05510 147 aa14.37□□□□□ -0.11
SHU1YHL006C IRC10Q08118 586 aa14.37□□□□□ -0.11
SHU1YHL006C TPK1P06244 397 aa14.36□□□□□ -0.11
SHU1YHL006C HMG2P12684 1045 aa14.36□□□□□ -0.11
SHU1YHL006C OM45P16547 393 aa14.36□□□□□ -0.11
SHU1YHL006C TBS1P38114 1094 aa14.36□□□□□ -0.11
SHU1YHL006C NOP13P53883 403 aaKnown RBP RIP-Chip data14.36□□□□□ -0.11not detected
SHU1YHL006C TIF35Q04067 274 aaKnown RBP14.36□□□□□ -0.11
SHU1YHL006C HCR1Q05775 265 aaKnown RBP14.36□□□□□ -0.11
SHU1YHL006C SPP382Q06411 708 aaPredicted RBP14.36□□□□□ -0.11
SHU1YHL006C LEA1Q08963 238 aaPredicted RBP14.36□□□□□ -0.11
SHU1YHL006C SLX4Q12098 748 aa14.36□□□□□ -0.11
SHU1YHL006C LSP1Q12230 341 aaKnown RBP14.36□□□□□ -0.11
SHU1YHL006C PSO2P30620 661 aa14.35□□□□□ -0.11
SHU1YHL006C ART5P53244 586 aaKnown RBP14.35□□□□□ -0.11
SHU1YHL006C TBF1Q02457 562 aa14.35□□□□□ -0.11
SHU1YHL006C AFT2Q08957 416 aa14.35□□□□□ -0.11
SHU1YHL006C MAK16P10962 306 aaPredicted RBP14.34□□□□□ -0.11
SHU1YHL006C SIF2P38262 535 aa14.34□□□□□ -0.11
SHU1YHL006C YTA12P40341 825 aa14.34□□□□□ -0.11
SHU1YHL006C YGR237CP50089 785 aa14.34□□□□□ -0.11
SHU1YHL006C ALT1P52893 592 aa14.34□□□□□ -0.11
SHU1YHL006C FAP1P53971 965 aa14.34□□□□□ -0.11
SHU1YHL006C FMP25Q08023 583 aa14.34□□□□□ -0.11
SHU1YHL006C FAL1Q12099 399 aaKnown RBP14.34□□□□□ -0.11
SHU1YHL006C TOR2P32600 2474 aaKnown RBP14.34□□□□□ -0.11
SHU1YHL006C RAM1P22007 431 aa14.33□□□□□ -0.12
SHU1YHL006C SWI3P32591 825 aa14.33□□□□□ -0.12
SHU1YHL006C CEF1Q03654 590 aaPredicted RBP14.33□□□□□ -0.12
SHU1YHL006C YPR027CQ12079 277 aa14.33□□□□□ -0.12
SHU1YHL006C CHS1P08004 1131 aa14.32□□□□□ -0.12
SHU1YHL006C PUP3P25451 205 aaKnown RBP14.32□□□□□ -0.12
SHU1YHL006C COY1P34237 679 aa14.32□□□□□ -0.12
SHU1YHL006C CIR1P42940 261 aa14.32□□□□□ -0.12
SHU1YHL006C TAF1P46677 1066 aa14.32□□□□□ -0.12
SHU1YHL006C RGA2Q06407 1009 aa14.32□□□□□ -0.12
SHU1YHL006C APC11Q12157 165 aa14.32□□□□□ -0.12
SHU1YHL006C HRT3Q12347 344 aa14.32□□□□□ -0.12
SHU1YHL006C GIS3Q12418 502 aa14.32□□□□□ -0.12
SHU1YHL006C PEX34P25584 144 aa14.31□□□□□ -0.12
SHU1YHL006C BCD1P38772 366 aa14.31□□□□□ -0.12
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms