RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	DNA2	P38859	1522 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	SWR1	Q05471	1514 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	RAD3	P06839	778 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	HSC82	P15108	705 aa	Known RBP	3.87	□□□□□ -1.79
ECO1	YFR027W	MSD1	P15179	658 aa	Known RBP	3.87	□□□□□ -1.79
ECO1	YFR027W	KAR3	P17119	729 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	ZUO1	P32527	433 aa	Known RBP	3.87	□□□□□ -1.79
ECO1	YFR027W	REC104	P33323	182 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	LST4	P34239	828 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	ERT1	P38140	529 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	GGA2	P38817	585 aa	Known RBP	3.87	□□□□□ -1.79
ECO1	YFR027W	RAI1	P53063	387 aa	Known RBP	3.87	□□□□□ -1.79
ECO1	YFR027W	YLR224W	Q05947	369 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	YPR196W	Q06595	470 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	CDC45	Q08032	650 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	YOL087C	Q99247	1116 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	MLP2	P40457	1679 aa		3.87	□□□□□ -1.79
ECO1	YFR027W	TOP3	P13099	656 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	CTS1	P29029	562 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	RRP14	P36080	434 aa	Known RBP	3.86	□□□□□ -1.79
ECO1	YFR027W	YBR284W	P38150	797 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	RSP5	P39940	809 aa	Known RBP	3.86	□□□□□ -1.79
ECO1	YFR027W	PEA2	P40091	420 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	HUL4	P40985	892 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	UBP6	P43593	499 aa	Known RBP	3.86	□□□□□ -1.79
ECO1	YFR027W	VID30	P53076	958 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	PXR1	P53335	271 aa	Predicted RBP	3.86	□□□□□ -1.79
ECO1	YFR027W	YDL124W	Q07551	312 aa	Known RBP	3.86	□□□□□ -1.79
ECO1	YFR027W	PPM2	Q08282	695 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	CDC53	Q12018	815 aa	Known RBP	3.86	□□□□□ -1.79
ECO1	YFR027W	YPR071W	Q12346	211 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	SEC39	Q12745	709 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	TAD3	Q9URQ3	322 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	TSC11	P40061	1430 aa		3.86	□□□□□ -1.79
ECO1	YFR027W	CAN1	P04817	590 aa		3.85	□□□□□ -1.79
ECO1	YFR027W	STE13	P33894	931 aa		3.85	□□□□□ -1.79
ECO1	YFR027W	RIO2	P40160	425 aa	Known RBP	3.85	□□□□□ -1.79
ECO1	YFR027W	VPS27	P40343	622 aa	Known RBP	3.85	□□□□□ -1.79
ECO1	YFR027W	MNN10	P50108	393 aa	Known RBP	3.85	□□□□□ -1.79
ECO1	YFR027W	RPN4	Q03465	531 aa		3.85	□□□□□ -1.79
ECO1	YFR027W	GSF2	Q04697	403 aa	Known RBP	3.85	□□□□□ -1.79
ECO1	YFR027W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
ECO1	YFR027W	POL1	P13382	1468 aa		3.85	□□□□□ -1.79
ECO1	YFR027W	SCC2	Q04002	1493 aa		3.85	□□□□□ -1.79
ECO1	YFR027W	HSL1	P34244	1518 aa		3.85	□□□□□ -1.79
ECO1	YFR027W	FBP1	P09201	348 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	GAL11	P19659	1081 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	SWH1	P35845	1188 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	BET3	P36149	193 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.84	□□□□□ -1.79	not detected
ECO1	YFR027W	PLB1	P39105	664 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	NDC80	P40460	691 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	RSC8	P43609	557 aa	Known RBP	3.84	□□□□□ -1.79
ECO1	YFR027W	MPP10	P47083	593 aa	Known RBP	3.84	□□□□□ -1.79
ECO1	YFR027W	RTA1	P53047	317 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	NCS6	P53088	359 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	MRS2	Q01926	470 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	TMA10	Q06177	86 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	YOR389W	Q08912	624 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	ENV7	Q12003	364 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	UPC2	Q12151	913 aa		3.84	□□□□□ -1.79
ECO1	YFR027W	REV3	P14284	1504 aa		3.84	□□□□□ -1.8
ECO1	YFR027W	PSO2	P30620	661 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	DCG1	P32460	244 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	SHM2	P37291	469 aa	Known RBP	3.83	□□□□□ -1.8
ECO1	YFR027W	STU2	P46675	888 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	EXG2	P52911	562 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	RSC1	P53236	928 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	COG8	Q04632	607 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	NDL1	Q06568	189 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	WHI4	Q07655	649 aa	Known RBP	3.83	□□□□□ -1.8
ECO1	YFR027W	GIN4	Q12263	1142 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	YOR131C	Q12486	218 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	KCS1	Q12494	1050 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	NUP159	P40477	1460 aa		3.83	□□□□□ -1.8
ECO1	YFR027W	SIN3	P22579	1536 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	NUP157	P40064	1391 aa	Known RBP	3.82	□□□□□ -1.8
ECO1	YFR027W	MPH2	P0CD99	609 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	RFA1	P22336	621 aa	Known RBP	3.82	□□□□□ -1.8
ECO1	YFR027W	URA1	P28272	314 aa	Predicted RBP	3.82	□□□□□ -1.8
ECO1	YFR027W	SRP40	P32583	406 aa	Predicted RBP	3.82	□□□□□ -1.8
ECO1	YFR027W	STE14	P32584	239 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	EMC3	P36039	253 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	HOS4	P40480	1083 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	CEP3	P40969	608 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	BUD6	P41697	788 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	IAH1	P41734	238 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
ECO1	YFR027W	MCM6	P53091	1017 aa	Known RBP	3.82	□□□□□ -1.8
ECO1	YFR027W	HDA1	P53973	706 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	YKR011C	Q02209	353 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	ORM2	Q06144	216 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	GUP2	Q08929	609 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	NPC2	Q12408	173 aa		3.82	□□□□□ -1.8
ECO1	YFR027W	PMA1	P05030	918 aa	Known RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	TOM70	P07213	617 aa	Known RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	EFB1	P32471	206 aa	Known RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	TYE7	P33122	291 aa	Predicted RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	YKL091C	P33324	310 aa	Known RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	RTT107	P38850	1070 aa		3.81	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms