RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W YPL109CQ02981 657 aa4.55□□□□□ -1.68
UBP6YFR010W ESC8Q08119 714 aa4.55□□□□□ -1.68
UBP6YFR010W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68 RIP-Chip
UBP6YFR010W PET123P17558 318 aa4.54□□□□□ -1.68
UBP6YFR010W SUI2P20459 304 aaKnown RBP4.54□□□□□ -1.68
UBP6YFR010W ARE1P25628 610 aa4.54□□□□□ -1.68
UBP6YFR010W MRP8P35719 219 aa4.54□□□□□ -1.68
UBP6YFR010W DHR2P36009 735 aaPredicted RBP4.54□□□□□ -1.68
UBP6YFR010W BET3P36149 193 aa4.54□□□□□ -1.68
UBP6YFR010W SRP72P38688 640 aaKnown RBP4.54□□□□□ -1.68
UBP6YFR010W PFD1P46988 109 aa4.54□□□□□ -1.68
UBP6YFR010W NPY1P53164 384 aa4.54□□□□□ -1.68
UBP6YFR010W SDA1P53313 767 aaKnown RBP4.54□□□□□ -1.68
UBP6YFR010W ZDS2P54786 942 aa4.54□□□□□ -1.68
UBP6YFR010W PEX13P80667 386 aa4.54□□□□□ -1.68
UBP6YFR010W TRS130Q03660 1102 aa4.54□□□□□ -1.68
UBP6YFR010W YMR018WQ04364 514 aa4.54□□□□□ -1.68
UBP6YFR010W ADY3Q07732 790 aa4.54□□□□□ -1.68
UBP6YFR010W SPO21Q12411 609 aa4.54□□□□□ -1.68
UBP6YFR010W RRP36Q12481 300 aaPredicted RBP4.54□□□□□ -1.68
UBP6YFR010W RPS4AP0CX35 261 aaKnown RBP4.53□□□□□ -1.68
UBP6YFR010W RPS4BP0CX36 261 aaKnown RBP4.53□□□□□ -1.68
UBP6YFR010W FUR1P18562 216 aaKnown RBP4.53□□□□□ -1.68
UBP6YFR010W BFR1P38934 470 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68 RIP-Chip
UBP6YFR010W MEF2P39677 819 aa4.53□□□□□ -1.68
UBP6YFR010W GDH3P39708 457 aa4.53□□□□□ -1.68
UBP6YFR010W HIS6P40545 261 aa4.53□□□□□ -1.68
UBP6YFR010W GCD10P41814 478 aa4.53□□□□□ -1.68
UBP6YFR010W SHE10P53075 577 aa4.53□□□□□ -1.68
UBP6YFR010W NCS2P53923 493 aaPredicted RBP4.53□□□□□ -1.68
UBP6YFR010W GTR1Q00582 310 aa4.53□□□□□ -1.68
UBP6YFR010W PTA1Q01329 785 aaPredicted RBP4.53□□□□□ -1.68
UBP6YFR010W EAR1Q03212 550 aa4.53□□□□□ -1.68
UBP6YFR010W SHE9Q04172 456 aa4.53□□□□□ -1.68
UBP6YFR010W UTP5Q04177 643 aaKnown RBP4.53□□□□□ -1.68
UBP6YFR010W YLR287CQ05881 355 aa4.53□□□□□ -1.68
UBP6YFR010W EAF1Q06337 982 aa4.53□□□□□ -1.68
UBP6YFR010W REC107P21651 314 aa4.52□□□□□ -1.69
UBP6YFR010W SAN1P22470 610 aa4.52□□□□□ -1.69
UBP6YFR010W NFS1P25374 497 aa4.52□□□□□ -1.69
UBP6YFR010W AGP1P25376 633 aa4.52□□□□□ -1.69
UBP6YFR010W BEM3P32873 1128 aa4.52□□□□□ -1.69
UBP6YFR010W SQT1P35184 431 aa4.52□□□□□ -1.69
UBP6YFR010W IRR1P40541 1150 aa4.52□□□□□ -1.69
UBP6YFR010W SEC26P41810 973 aaKnown RBP4.52□□□□□ -1.69
UBP6YFR010W OYE3P41816 400 aaPredicted RBP4.52□□□□□ -1.69
UBP6YFR010W TAN1P53072 289 aaPredicted RBP4.52□□□□□ -1.69
UBP6YFR010W RCM1P53972 490 aa4.52□□□□□ -1.69
UBP6YFR010W EEB1Q02891 456 aa4.52□□□□□ -1.69
UBP6YFR010W MTQ2Q03920 221 aaPredicted RBP4.52□□□□□ -1.69
UBP6YFR010W YMR111CQ04461 462 aaPredicted RBP4.52□□□□□ -1.69
UBP6YFR010W MRN1Q08925 612 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
UBP6YFR010W RRG1Q12167 365 aaPredicted RBP4.52□□□□□ -1.69
UBP6YFR010W SMC6Q12749 1114 aa4.52□□□□□ -1.69
UBP6YFR010W HSH49Q99181 213 aaPredicted RBP4.52□□□□□ -1.69
UBP6YFR010W STF1P01098 86 aa4.51□□□□□ -1.69
UBP6YFR010W GCR1P07261 785 aa4.51□□□□□ -1.69
UBP6YFR010W RPC40P07703 335 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W HNM1P19807 563 aa4.51□□□□□ -1.69
UBP6YFR010W SRO9P25567 434 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W DAL80P26343 269 aa4.51□□□□□ -1.69
UBP6YFR010W SWC3P31376 625 aa4.51□□□□□ -1.69
UBP6YFR010W PET309P32522 965 aaPredicted RBP4.51□□□□□ -1.69
UBP6YFR010W ARC19P33204 171 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W UBS1P38290 277 aa4.51□□□□□ -1.69
UBP6YFR010W PEX28P38848 579 aa4.51□□□□□ -1.69
UBP6YFR010W YAR028WP39548 234 aa4.51□□□□□ -1.69
UBP6YFR010W RTT105P40063 208 aa4.51□□□□□ -1.69
UBP6YFR010W MGS1P40151 587 aa4.51□□□□□ -1.69
UBP6YFR010W XKS1P42826 600 aa4.51□□□□□ -1.69
UBP6YFR010W UTP8P53276 713 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W ALF1P53904 254 aa4.51□□□□□ -1.69
UBP6YFR010W CWC21Q03375 135 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W TAF11Q04226 346 aa4.51□□□□□ -1.69
UBP6YFR010W YKU80Q04437 629 aa4.51□□□□□ -1.69
UBP6YFR010W EIS1Q05050 843 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W ARV1Q06541 321 aa4.51□□□□□ -1.69
UBP6YFR010W AOS1Q06624 347 aa4.51□□□□□ -1.69
UBP6YFR010W YOR059CQ08448 450 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W CLP1Q08685 445 aaPredicted RBP4.51□□□□□ -1.69
UBP6YFR010W SMF3Q12078 473 aaPredicted RBP4.51□□□□□ -1.69
UBP6YFR010W RUD3Q12234 484 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W SES1P07284 462 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W VMA2P16140 517 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W RER1P25560 188 aa4.51□□□□□ -1.69
UBP6YFR010W SBA1P28707 216 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W MKK2P32491 506 aa4.51□□□□□ -1.69
UBP6YFR010W ORC2P32833 620 aa4.51□□□□□ -1.69
UBP6YFR010W RIB7P33312 244 aa4.51□□□□□ -1.69
UBP6YFR010W CNS1P33313 385 aa4.51□□□□□ -1.69
UBP6YFR010W ATG19P35193 415 aa4.51□□□□□ -1.69
UBP6YFR010W NNK1P36003 928 aa4.51□□□□□ -1.69
UBP6YFR010W PBY1P38254 753 aa4.51□□□□□ -1.69
UBP6YFR010W ERR3P42222 437 aa4.51□□□□□ -1.69
UBP6YFR010W DUG1P43616 481 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W SET2P46995 733 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W NIT2P47016 307 aa4.51□□□□□ -1.69
UBP6YFR010W RNR4P49723 345 aaKnown RBP4.51□□□□□ -1.69
UBP6YFR010W ARA2Q04212 335 aa4.51□□□□□ -1.69
UBP6YFR010W TDA9Q04545 1251 aa4.51□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms