RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	NPC2	Q12408	173 aa		2.82	□□□□□ -1.96
DOT6	YER088C	YBR182C-A	Q8TGU6	64 aa		2.82	□□□□□ -1.96
DOT6	YER088C	GEA2	P39993	1459 aa	Known RBP	2.82	□□□□□ -1.96
DOT6	YER088C	CDC9	P04819	755 aa		2.81	□□□□□ -1.96
DOT6	YER088C	TUB3	P09734	445 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	DAL7	P21826	554 aa		2.81	□□□□□ -1.96
DOT6	YER088C	RFA1	P22336	621 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	STE11	P23561	717 aa		2.81	□□□□□ -1.96
DOT6	YER088C	DCG1	P32460	244 aa		2.81	□□□□□ -1.96
DOT6	YER088C	MCD4	P36051	919 aa		2.81	□□□□□ -1.96
DOT6	YER088C	NMD2	P38798	1089 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	YIL108W	P40483	696 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	NIT3	P49954	291 aa		2.81	□□□□□ -1.96
DOT6	YER088C	NOG2	P53742	486 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	UGO1	Q03327	502 aa		2.81	□□□□□ -1.96
DOT6	YER088C	ESC8	Q08119	714 aa		2.81	□□□□□ -1.96
DOT6	YER088C	GPR1	Q12361	961 aa		2.81	□□□□□ -1.96
DOT6	YER088C	SCC2	Q04002	1493 aa		2.81	□□□□□ -1.96
DOT6	YER088C	RPO31	P04051	1460 aa		2.81	□□□□□ -1.96
DOT6	YER088C	YPK9	Q12697	1472 aa		2.81	□□□□□ -1.96
DOT6	YER088C	MET6	P05694	767 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	PRP4	P20053	465 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	MIH1	P23748	554 aa		2.81	□□□□□ -1.96
DOT6	YER088C	CYS3	P31373	394 aa	Known RBP	2.81	□□□□□ -1.96
DOT6	YER088C	THI4	P32318	326 aa		2.81	□□□□□ -1.96
DOT6	YER088C	BUL1	P48524	976 aa		2.81	□□□□□ -1.96
DOT6	YER088C	ERG5	P54781	538 aa		2.81	□□□□□ -1.96
DOT6	YER088C	TMA10	Q06177	86 aa		2.81	□□□□□ -1.96
DOT6	YER088C	NTG2	Q08214	380 aa		2.81	□□□□□ -1.96
DOT6	YER088C	RPP2A	P05319	106 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	YCR015C	P25616	317 aa		2.8	□□□□□ -1.96
DOT6	YER088C	CTS1	P29029	562 aa		2.8	□□□□□ -1.96
DOT6	YER088C	SEC21	P32074	935 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	CAF16	P43569	289 aa		2.8	□□□□□ -1.96
DOT6	YER088C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
DOT6	YER088C	PAN1	P32521	1480 aa		2.8	□□□□□ -1.96
DOT6	YER088C	KAR4	P25583	335 aa		2.8	□□□□□ -1.96
DOT6	YER088C	VBA3	P25594	458 aa		2.8	□□□□□ -1.96
DOT6	YER088C	PEX6	P33760	1030 aa		2.8	□□□□□ -1.96
DOT6	YER088C	MNN10	P50108	393 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	DUS1	P53759	423 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	YDR514C	Q04408	483 aa		2.8	□□□□□ -1.96
DOT6	YER088C	YDR338C	Q05497	695 aa		2.8	□□□□□ -1.96
DOT6	YER088C	REH1	Q06709	432 aa		2.8	□□□□□ -1.96
DOT6	YER088C	YLR001C	Q07895	862 aa		2.8	□□□□□ -1.96
DOT6	YER088C	GUP2	Q08929	609 aa		2.8	□□□□□ -1.96
DOT6	YER088C	YOR022C	Q12204	715 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-H	O13535	1793 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-DR5	P0C2I2	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-DR6	P0C2I3	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-LR2	P0C2I5	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-PR2	P0C2J0	1756 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-JR1	P47098	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-ML2	Q03434	1755 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-ER1	Q03612	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-ML1	Q04711	1755 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-GR2	Q12269	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-OL	Q12273	1755 aa		2.8	□□□□□ -1.96
DOT6	YER088C	TY1B-PL	Q12414	1755 aa	Known RBP	2.8	□□□□□ -1.96
DOT6	YER088C	PMA1	P05030	918 aa	Known RBP	2.79	□□□□□ -1.96
DOT6	YER088C	SRD1	P09007	221 aa		2.79	□□□□□ -1.96
DOT6	YER088C	SED4	P25365	1065 aa		2.79	□□□□□ -1.96
DOT6	YER088C	PER1	P25625	357 aa		2.79	□□□□□ -1.96
DOT6	YER088C	PPG1	P32838	368 aa		2.79	□□□□□ -1.96
DOT6	YER088C	MSS4	P38994	779 aa		2.79	□□□□□ -1.96
DOT6	YER088C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.79	□□□□□ -1.96	not detected
DOT6	YER088C	RLP7	P40693	322 aa	Known RBP	2.79	□□□□□ -1.96
DOT6	YER088C	POB3	Q04636	552 aa	Known RBP	2.79	□□□□□ -1.96
DOT6	YER088C	PCL2	P25693	308 aa		2.78	□□□□□ -1.96
DOT6	YER088C	SHM2	P37291	469 aa	Known RBP	2.78	□□□□□ -1.96
DOT6	YER088C	PHO23	P50947	330 aa		2.78	□□□□□ -1.96
DOT6	YER088C	MCM6	P53091	1017 aa	Known RBP	2.78	□□□□□ -1.96
DOT6	YER088C	DOS2	P54858	310 aa		2.78	□□□□□ -1.96
DOT6	YER088C	VPS30	Q02948	557 aa		2.78	□□□□□ -1.96
DOT6	YER088C	MMS1	Q06211	1407 aa		2.78	□□□□□ -1.96
DOT6	YER088C	ENB1	Q08299	606 aa		2.78	□□□□□ -1.96
DOT6	YER088C	TY2B-B	Q12491	1770 aa		2.78	□□□□□ -1.96
DOT6	YER088C	SSN2	P38931	1420 aa		2.78	□□□□□ -1.96
DOT6	YER088C	YRF1-1	P0CX20	1796 aa		2.78	□□□□□ -1.96
DOT6	YER088C	YRF1-5	P0CX21	1796 aa		2.78	□□□□□ -1.96
DOT6	YER088C	YRF1-8	P0CX22	1796 aa		2.78	□□□□□ -1.96
DOT6	YER088C	RPS9A	O13516	197 aa	Known RBP	2.78	□□□□□ -1.96
DOT6	YER088C	RPL8A	P17076	256 aa	Known RBP	2.78	□□□□□ -1.96
DOT6	YER088C	YHR078W	P38799	552 aa		2.78	□□□□□ -1.96
DOT6	YER088C	MNN1	P39106	762 aa		2.78	□□□□□ -1.96
DOT6	YER088C	GIP4	P39732	760 aa		2.78	□□□□□ -1.96
DOT6	YER088C	MRPS35	P53292	345 aa		2.78	□□□□□ -1.96
DOT6	YER088C	STO1	P34160	861 aa	Known RBP	2.77	□□□□□ -1.97
DOT6	YER088C	SET5	P38890	526 aa	Known RBP	2.77	□□□□□ -1.97
DOT6	YER088C	ZIP2	P53061	704 aa		2.77	□□□□□ -1.97
DOT6	YER088C	ASI2	P53895	289 aa		2.77	□□□□□ -1.97
DOT6	YER088C	SNP1	Q00916	300 aa	Predicted RBP	2.77	□□□□□ -1.97
DOT6	YER088C	MUS81	Q04149	632 aa	Predicted RBP	2.77	□□□□□ -1.97
DOT6	YER088C	ASM4	Q05166	528 aa		2.77	□□□□□ -1.97
DOT6	YER088C	NTO1	Q12311	748 aa		2.77	□□□□□ -1.97
DOT6	YER088C	NOP14	Q99207	810 aa	Known RBP	2.77	□□□□□ -1.97
DOT6	YER088C	PRC1	P00729	532 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms