RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W POB3Q04636 552 aaKnown RBP5.21□□□□□ -1.58
HSP42YDR171W ACK1Q07622 623 aaPredicted RBP5.21□□□□□ -1.58
HSP42YDR171W NTG2Q08214 380 aa5.21□□□□□ -1.58
HSP42YDR171W TY2B-BQ12491 1770 aa5.21□□□□□ -1.58
HSP42YDR171W ESC1Q03661 1658 aaKnown RBP5.21□□□□□ -1.58
HSP42YDR171W NUP159P40477 1460 aa5.2□□□□□ -1.58
HSP42YDR171W YCL002CP25565 263 aa5.2□□□□□ -1.58
HSP42YDR171W YDR514CQ04408 483 aa5.2□□□□□ -1.58
HSP42YDR171W HIS5P07172 385 aa5.19□□□□□ -1.58
HSP42YDR171W VBA3P25594 458 aa5.19□□□□□ -1.58
HSP42YDR171W CYS3P31373 394 aaKnown RBP5.19□□□□□ -1.58
HSP42YDR171W THI80P35202 319 aa5.19□□□□□ -1.58
HSP42YDR171W MNN1P39106 762 aa5.19□□□□□ -1.58
HSP42YDR171W TY4A-JP47023 414 aa5.19□□□□□ -1.58
HSP42YDR171W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
HSP42YDR171W PUS2P53167 370 aa5.19□□□□□ -1.58
HSP42YDR171W NOG2P53742 486 aaKnown RBP5.19□□□□□ -1.58
HSP42YDR171W MDM12Q92328 271 aa5.19□□□□□ -1.58
HSP42YDR171W IRC20Q06554 1556 aa5.19□□□□□ -1.58
HSP42YDR171W GCN2P15442 1659 aa5.18□□□□□ -1.58
HSP42YDR171W TY3B-GQ99315 1547 aa5.18□□□□□ -1.58
HSP42YDR171W MHP1P43638 1398 aa5.18□□□□□ -1.58
HSP42YDR171W CDC9P04819 755 aa5.18□□□□□ -1.58
HSP42YDR171W PEX6P33760 1030 aa5.18□□□□□ -1.58
HSP42YDR171W ATG19P35193 415 aa5.18□□□□□ -1.58
HSP42YDR171W SAP190P36123 1033 aa5.18□□□□□ -1.58
HSP42YDR171W ATP25Q03153 612 aa5.18□□□□□ -1.58
HSP42YDR171W YLR224WQ05947 369 aa5.18□□□□□ -1.58
HSP42YDR171W RSC3Q06639 885 aa5.18□□□□□ -1.58
HSP42YDR171W HAL9Q12180 1030 aa5.18□□□□□ -1.58
HSP42YDR171W YOR022CQ12204 715 aa5.18□□□□□ -1.58
HSP42YDR171W YBT1P32386 1661 aa5.18□□□□□ -1.58
HSP42YDR171W GSY1P23337 708 aa5.17□□□□□ -1.58
HSP42YDR171W PLB1P39105 664 aa5.17□□□□□ -1.58
HSP42YDR171W UGO1Q03327 502 aa5.17□□□□□ -1.58
HSP42YDR171W TMA10Q06177 86 aa5.17□□□□□ -1.58
HSP42YDR171W REH1Q06709 432 aa5.17□□□□□ -1.58
HSP42YDR171W NOP12Q08208 459 aaKnown RBP5.17□□□□□ -1.58
HSP42YDR171W VPS15P22219 1454 aa5.17□□□□□ -1.58
HSP42YDR171W DNF1P32660 1571 aa5.16□□□□□ -1.58
HSP42YDR171W PRC1P00729 532 aa5.16□□□□□ -1.58
HSP42YDR171W URM1P40554 99 aaPredicted RBP5.16□□□□□ -1.58
HSP42YDR171W UPC2Q12151 913 aa5.16□□□□□ -1.58
HSP42YDR171W NPC2Q12408 173 aa5.16□□□□□ -1.58
HSP42YDR171W PDR5P33302 1511 aaKnown RBP5.16□□□□□ -1.58
HSP42YDR171W TY1B-HO13535 1793 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-DR5P0C2I2 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-DR6P0C2I3 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-LR2P0C2I5 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-LR3P0C2I6 1755 aaKnown RBP5.15□□□□□ -1.58
HSP42YDR171W TY1B-PR1P0C2I9 1755 aaKnown RBP5.15□□□□□ -1.58
HSP42YDR171W TY1B-PR2P0C2J0 1756 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-PR3P0C2J1 1755 aaKnown RBP5.15□□□□□ -1.58
HSP42YDR171W TY1B-JR1P47098 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-ML2Q03434 1755 aaKnown RBP5.15□□□□□ -1.58
HSP42YDR171W TY1B-ER1Q03612 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-ML1Q04711 1755 aaKnown RBP5.15□□□□□ -1.58
HSP42YDR171W TY1B-GR2Q12269 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-OLQ12273 1755 aa5.15□□□□□ -1.58
HSP42YDR171W TY1B-PLQ12414 1755 aaKnown RBP5.15□□□□□ -1.58
HSP42YDR171W RPP2AP05319 106 aaKnown RBP5.15□□□□□ -1.59
HSP42YDR171W CLC1P17891 233 aa5.15□□□□□ -1.59
HSP42YDR171W PRE10P21242 288 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
HSP42YDR171W SED4P25365 1065 aa5.15□□□□□ -1.59
HSP42YDR171W IME2P32581 645 aa5.15□□□□□ -1.59
HSP42YDR171W LST4P34239 828 aa5.15□□□□□ -1.59
HSP42YDR171W MTC2P34246 357 aa5.15□□□□□ -1.59
HSP42YDR171W UBP5P39944 805 aa5.15□□□□□ -1.59
HSP42YDR171W IRC24P40580 263 aa5.15□□□□□ -1.59
HSP42YDR171W SHR5P41912 237 aa5.15□□□□□ -1.59
HSP42YDR171W CHA4P43634 648 aa5.15□□□□□ -1.59
HSP42YDR171W NCS6P53088 359 aa5.15□□□□□ -1.59
HSP42YDR171W TFB2Q02939 513 aa5.15□□□□□ -1.59
HSP42YDR171W KCS1Q12494 1050 aa5.15□□□□□ -1.59
HSP42YDR171W YLR358CO13565 187 aa5.14□□□□□ -1.59
HSP42YDR171W FBP1P09201 348 aa5.14□□□□□ -1.59
HSP42YDR171W RAD18P10862 487 aa5.14□□□□□ -1.59
HSP42YDR171W BRN1P38170 754 aa5.14□□□□□ -1.59
HSP42YDR171W ALY2P47029 1046 aa5.14□□□□□ -1.59
HSP42YDR171W DUS1P53759 423 aaKnown RBP5.14□□□□□ -1.59
HSP42YDR171W SRD1P09007 221 aa5.13□□□□□ -1.59
HSP42YDR171W STE14P32584 239 aa5.13□□□□□ -1.59
HSP42YDR171W STO1P34160 861 aaKnown RBP5.13□□□□□ -1.59
HSP42YDR171W MCD4P36051 919 aa5.13□□□□□ -1.59
HSP42YDR171W SPC42P36094 363 aa5.13□□□□□ -1.59
HSP42YDR171W SDP1P40479 209 aa5.13□□□□□ -1.59
HSP42YDR171W RLP7P40693 322 aaKnown RBP5.13□□□□□ -1.59
HSP42YDR171W HXT16P47185 567 aa5.13□□□□□ -1.59
HSP42YDR171W CRR1Q05790 422 aa5.13□□□□□ -1.59
HSP42YDR171W YBR182C-AQ8TGU6 64 aa5.13□□□□□ -1.59
HSP42YDR171W NOP14Q99207 810 aaKnown RBP5.13□□□□□ -1.59
HSP42YDR171W DIF1O13577 133 aa5.12□□□□□ -1.59
HSP42YDR171W MNN4P36044 1178 aa5.12□□□□□ -1.59
HSP42YDR171W YHR078WP38799 552 aa5.12□□□□□ -1.59
HSP42YDR171W CTF8P38877 133 aa5.12□□□□□ -1.59
HSP42YDR171W SET5P38890 526 aaKnown RBP5.12□□□□□ -1.59
HSP42YDR171W YJR142WP47173 342 aa5.12□□□□□ -1.59
HSP42YDR171W TCB2P48231 1178 aa5.12□□□□□ -1.59
HSP42YDR171W CAT8P39113 1433 aa5.12□□□□□ -1.59
HSP42YDR171W SFP1P32432 683 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms