RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W PHO8P11491 566 aa5.88□□□□□ -1.47
SHR3YDL212W CHS7P38843 316 aa5.88□□□□□ -1.47
SHR3YDL212W RSC3Q06639 885 aa5.88□□□□□ -1.47
SHR3YDL212W EFT1P32324 842 aaKnown RBP5.87□□□□□ -1.47
SHR3YDL212W CTF13P35203 478 aa5.87□□□□□ -1.47
SHR3YDL212W SAP190P36123 1033 aa5.87□□□□□ -1.47
SHR3YDL212W VHR1P40522 640 aa5.87□□□□□ -1.47
SHR3YDL212W SSY5P47002 699 aa5.87□□□□□ -1.47
SHR3YDL212W ASM4Q05166 528 aa5.87□□□□□ -1.47
SHR3YDL212W YDR338CQ05497 695 aa5.87□□□□□ -1.47
SHR3YDL212W YLR040CQ07988 224 aa5.87□□□□□ -1.47
SHR3YDL212W GPR1Q12361 961 aa5.87□□□□□ -1.47
SHR3YDL212W SWM1Q12379 170 aa5.87□□□□□ -1.47
SHR3YDL212W TRP4P07285 380 aaPredicted RBP5.86□□□□□ -1.47
SHR3YDL212W MTC2P34246 357 aa5.86□□□□□ -1.47
SHR3YDL212W SET5P38890 526 aaKnown RBP5.86□□□□□ -1.47
SHR3YDL212W MUS81Q04149 632 aaPredicted RBP5.86□□□□□ -1.47
SHR3YDL212W AIM39Q08223 395 aa5.86□□□□□ -1.47
SHR3YDL212W YLR125WQ12138 136 aa5.86□□□□□ -1.47
SHR3YDL212W MDM12Q92328 271 aa5.86□□□□□ -1.47
SHR3YDL212W SAK1P38990 1142 aa5.85□□□□□ -1.47
SHR3YDL212W RLP7P40693 322 aaKnown RBP5.85□□□□□ -1.47
SHR3YDL212W TRM11Q12463 433 aa5.85□□□□□ -1.47
SHR3YDL212W CDC9P04819 755 aa5.84□□□□□ -1.47
SHR3YDL212W PFA3P42836 336 aa5.84□□□□□ -1.47
SHR3YDL212W ORC1P54784 914 aaPredicted RBP5.84□□□□□ -1.47
SHR3YDL212W ERG4P25340 473 aa5.83□□□□□ -1.48
SHR3YDL212W MSH2P25847 964 aa5.83□□□□□ -1.48
SHR3YDL212W THI4P32318 326 aa5.83□□□□□ -1.48
SHR3YDL212W MCD4P36051 919 aa5.83□□□□□ -1.48
SHR3YDL212W RPP1P38786 293 aa5.83□□□□□ -1.48
SHR3YDL212W ALY2P47029 1046 aa5.83□□□□□ -1.48
SHR3YDL212W ZIP2P53061 704 aa5.83□□□□□ -1.48
SHR3YDL212W PNS1Q12412 539 aa5.83□□□□□ -1.48
SHR3YDL212W DIF1O13577 133 aa5.82□□□□□ -1.48
SHR3YDL212W FKH2P41813 862 aa5.82□□□□□ -1.48
SHR3YDL212W SHR5P41912 237 aa5.82□□□□□ -1.48
SHR3YDL212W FPR4Q06205 392 aaPredicted RBP5.82□□□□□ -1.48
SHR3YDL212W VBA3P25594 458 aa5.81□□□□□ -1.48
SHR3YDL212W DSS1P39112 969 aa5.81□□□□□ -1.48
SHR3YDL212W PZF1P39933 429 aa5.81□□□□□ -1.48
SHR3YDL212W CRR1Q05790 422 aa5.81□□□□□ -1.48
SHR3YDL212W YOL073CQ08232 322 aa5.81□□□□□ -1.48
SHR3YDL212W YLR415CO13578 112 aa5.8□□□□□ -1.48
SHR3YDL212W MIH1P23748 554 aa5.8□□□□□ -1.48
SHR3YDL212W KTR4P38131 464 aa5.8□□□□□ -1.48
SHR3YDL212W SUL1P38359 859 aa5.8□□□□□ -1.48
SHR3YDL212W ZDS1P50111 915 aaKnown RBP5.8□□□□□ -1.48
SHR3YDL212W PKH1Q03407 766 aa5.8□□□□□ -1.48
SHR3YDL212W NTG2Q08214 380 aa5.79□□□□□ -1.48
SHR3YDL212W YLR149CQ99296 730 aa5.79□□□□□ -1.48
SHR3YDL212W Q0142Q9ZZW4 58 aa5.79□□□□□ -1.48
SHR3YDL212W SRD1P09007 221 aa5.78□□□□□ -1.48
SHR3YDL212W STO1P34160 861 aaKnown RBP5.78□□□□□ -1.48
SHR3YDL212W SIC1P38634 284 aa5.78□□□□□ -1.48
SHR3YDL212W ELO3P40319 345 aa5.78□□□□□ -1.48
SHR3YDL212W CAF16P43569 289 aa5.78□□□□□ -1.48
SHR3YDL212W OSW7P43611 510 aa5.78□□□□□ -1.48
SHR3YDL212W MUP1P50276 574 aa5.78□□□□□ -1.48
SHR3YDL212W CTF4Q01454 927 aa5.78□□□□□ -1.48
SHR3YDL212W PEX6P33760 1030 aa5.77□□□□□ -1.49
SHR3YDL212W YBR053CP38235 358 aa5.77□□□□□ -1.49
SHR3YDL212W RNH70P53331 553 aa5.77□□□□□ -1.49
SHR3YDL212W ALG12P53730 551 aa5.77□□□□□ -1.49
SHR3YDL212W SNP1Q00916 300 aaPredicted RBP5.77□□□□□ -1.49
SHR3YDL212W NRG1Q03125 231 aa5.77□□□□□ -1.49
SHR3YDL212W UGO1Q03327 502 aa5.77□□□□□ -1.49
SHR3YDL212W TGL5Q12043 749 aa5.77□□□□□ -1.49
SHR3YDL212W MET6P05694 767 aaKnown RBP5.76□□□□□ -1.49
SHR3YDL212W ALG7P07286 448 aa5.76□□□□□ -1.49
SHR3YDL212W GSY1P23337 708 aa5.76□□□□□ -1.49
SHR3YDL212W MTR3P48240 250 aaPredicted RBP5.76□□□□□ -1.49
SHR3YDL212W RNT1Q02555 471 aa5.76□□□□□ -1.49
SHR3YDL212W URN1Q06525 465 aaKnown RBP5.76□□□□□ -1.49
SHR3YDL212W FRE5Q08908 694 aa5.76□□□□□ -1.49
SHR3YDL212W PPR1P07272 904 aaPredicted RBP5.75□□□□□ -1.49
SHR3YDL212W MET3P08536 511 aa5.75□□□□□ -1.49
SHR3YDL212W DLT1Q04216 342 aa5.75□□□□□ -1.49
SHR3YDL212W RAD18P10862 487 aa5.74□□□□□ -1.49
SHR3YDL212W CAF20P12962 161 aaKnown RBP5.74□□□□□ -1.49
SHR3YDL212W RRP14P36080 434 aaKnown RBP5.74□□□□□ -1.49
SHR3YDL212W YKR051WP36142 418 aa5.74□□□□□ -1.49
SHR3YDL212W BNA2P47125 453 aa5.74□□□□□ -1.49
SHR3YDL212W MUK1Q02866 612 aa5.74□□□□□ -1.49
SHR3YDL212W YMR206WQ03695 313 aa5.74□□□□□ -1.49
SHR3YDL212W POB3Q04636 552 aaKnown RBP5.74□□□□□ -1.49
SHR3YDL212W NGG1P32494 702 aa5.73□□□□□ -1.49
SHR3YDL212W MOH1P38191 138 aa5.73□□□□□ -1.49
SHR3YDL212W ADY4Q05955 493 aa5.73□□□□□ -1.49
SHR3YDL212W PCL2P25693 308 aa5.72□□□□□ -1.49
SHR3YDL212W HOG1P32485 435 aa5.72□□□□□ -1.49
SHR3YDL212W PPG1P32838 368 aa5.72□□□□□ -1.49
SHR3YDL212W RPN10P38886 268 aaKnown RBP5.72□□□□□ -1.49
SHR3YDL212W YLR001CQ07895 862 aa5.72□□□□□ -1.49
SHR3YDL212W OAR1P35731 278 aa5.71□□□□□ -1.5
SHR3YDL212W PPS1P38148 807 aa5.71□□□□□ -1.5
SHR3YDL212W YFL052WP43551 465 aa5.71□□□□□ -1.5
SHR3YDL212W UBC9P50623 157 aaPredicted RBP5.71□□□□□ -1.5
SHR3YDL212W NPY1P53164 384 aa5.71□□□□□ -1.5
SHR3YDL212W NHX1Q04121 633 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms