RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	TY1A-OL	Q92392	440 aa	Known RBP	5.12	□□□□□ -1.59
RXT3	YDL076C	AI3	P03877	415 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	INO1	P11986	533 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	HSP60	P19882	572 aa	Known RBP	5.11	□□□□□ -1.59
RXT3	YDL076C	SRM1	P21827	482 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	YKR073C	P36153	106 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	VBA5	P36172	582 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	SEA4	P38164	1038 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	PBY1	P38254	753 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	YHR020W	P38708	688 aa	Known RBP	5.11	□□□□□ -1.59
RXT3	YDL076C	OSH3	P38713	996 aa	Known RBP	5.11	□□□□□ -1.59
RXT3	YDL076C	SNF7	P39929	240 aa	Known RBP	5.11	□□□□□ -1.59
RXT3	YDL076C	IRR1	P40541	1150 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	AIM21	P40563	679 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	LEM3	P42838	414 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	YGL242C	P53066	181 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	ERP6	P53198	216 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	SOL4	P53315	255 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	HAS1	Q03532	505 aa	Known RBP	5.11	□□□□□ -1.59
RXT3	YDL076C	ECM30	Q06673	1274 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	YIG1	Q08956	461 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	PDR18	P53756	1333 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	FLO1	P32768	1537 aa		5.11	□□□□□ -1.59
RXT3	YDL076C	SYP1	P25623	870 aa	Known RBP	5.1	□□□□□ -1.59
RXT3	YDL076C	RPL8B	P29453	256 aa	Known RBP	5.1	□□□□□ -1.59
RXT3	YDL076C	MKK2	P32491	506 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	STE5	P32917	917 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	PGM1	P33401	570 aa	Known RBP	5.1	□□□□□ -1.59
RXT3	YDL076C	ADD66	P36040	267 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	UIP5	P36137	443 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	NEM1	P38757	446 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	GGA2	P38817	585 aa	Known RBP	5.1	□□□□□ -1.59
RXT3	YDL076C	MNN1	P39106	762 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	RSP5	P39940	809 aa	Known RBP	5.1	□□□□□ -1.59
RXT3	YDL076C	YIL092W	P40497	633 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	YVH1	Q02256	364 aa	Known RBP	5.1	□□□□□ -1.59
RXT3	YDL076C	UBX5	Q06682	500 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	FMP25	Q08023	583 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	MED7	Q08278	222 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	YGR161W-C	Q3E744	92 aa		5.1	□□□□□ -1.59
RXT3	YDL076C	CIT1	P00890	479 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	TRP3	P00937	484 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	PRP9	P19736	530 aa	Known RBP	5.09	□□□□□ -1.59
RXT3	YDL076C	ARE1	P25628	610 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	YKL107W	P34251	309 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	GPT2	P36148	743 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	GRX7	P38068	203 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	MCM7	P38132	845 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	SLS1	P42900	643 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	CNN1	P43618	361 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	SOK2	P53438	785 aa	Predicted RBP	5.09	□□□□□ -1.59
RXT3	YDL076C	YML037C	Q03703	340 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	TIF35	Q04067	274 aa	Known RBP	5.09	□□□□□ -1.59
RXT3	YDL076C	UTP5	Q04177	643 aa	Known RBP	5.09	□□□□□ -1.59
RXT3	YDL076C	UTP14	Q04500	899 aa	Known RBP	5.09	□□□□□ -1.59
RXT3	YDL076C	EAF1	Q06337	982 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	SUT2	Q12286	268 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	RKM4	Q12504	494 aa		5.09	□□□□□ -1.59
RXT3	YDL076C	SAC7	P17121	654 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	DBP5	P20449	482 aa	Known RBP	5.08	□□□□□ -1.6
RXT3	YDL076C	THI4	P32318	326 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	ARL1	P38116	183 aa	Known RBP	5.08	□□□□□ -1.6
RXT3	YDL076C	RTS1	P38903	757 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	VPS8	P39702	1274 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	TIF4631	P39935	952 aa	Known RBP	5.08	□□□□□ -1.6
RXT3	YDL076C	HUL4	P40985	892 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	YNR063W	P53749	607 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	SPO71	Q03868	1245 aa		5.08	□□□□□ -1.6
RXT3	YDL076C	MDM20	Q12387	796 aa	Known RBP	5.08	□□□□□ -1.6
RXT3	YDL076C	NOT3	P06102	836 aa	Known RBP	5.07	□□□□□ -1.6
RXT3	YDL076C	HEM1	P09950	548 aa	Predicted RBP	5.07	□□□□□ -1.6
RXT3	YDL076C	TPM1	P17536	199 aa	Known RBP	5.07	□□□□□ -1.6
RXT3	YDL076C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
RXT3	YDL076C	COQ2	P32378	372 aa		5.07	□□□□□ -1.6
RXT3	YDL076C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
RXT3	YDL076C	YGL176C	P46945	554 aa		5.07	□□□□□ -1.6
RXT3	YDL076C	GCV1	P48015	400 aa		5.07	□□□□□ -1.6
RXT3	YDL076C	LSB1	P53281	241 aa		5.07	□□□□□ -1.6
RXT3	YDL076C	RKM2	Q03942	479 aa		5.07	□□□□□ -1.6
RXT3	YDL076C	CAN1	P04817	590 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	ERR1	P0CX10	437 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	ERR2	P0CX11	437 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	KRS1	P15180	591 aa	Known RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	TSR4	P25040	408 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	MCM4	P30665	933 aa	Known RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	KAE1	P36132	386 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	REI1	P38344	393 aa	Predicted RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	RRM3	P38766	723 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	PAN5	P38787	379 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	GIP2	P40036	548 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	VID27	P40157	782 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	YMR147W	P40218	223 aa	Known RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	ALR2	P43553	858 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	PFD1	P46988	109 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	HNT2	P49775	206 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	BRE5	P53741	515 aa	Known RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	BUL2	Q03758	920 aa	Known RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	ECM16	Q04217	1267 aa	Known RBP	5.06	□□□□□ -1.6
RXT3	YDL076C	SKG3	Q06315	1026 aa		5.06	□□□□□ -1.6
RXT3	YDL076C	BRE1	Q07457	700 aa	Known RBP	5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms