RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	RLP7	P40693	322 aa	Known RBP	4.27	□□□□□ -1.73
PBP4	YDL053C	UGO1	Q03327	502 aa		4.27	□□□□□ -1.73
PBP4	YDL053C	NTG2	Q08214	380 aa		4.27	□□□□□ -1.73
PBP4	YDL053C	ENB1	Q08299	606 aa		4.27	□□□□□ -1.73
PBP4	YDL053C	DIF1	O13577	133 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	PFK1	P16861	987 aa	Known RBP	4.26	□□□□□ -1.73
PBP4	YDL053C	STO1	P34160	861 aa	Known RBP	4.26	□□□□□ -1.73
PBP4	YDL053C	MCD4	P36051	919 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	NMD2	P38798	1089 aa	Known RBP	4.26	□□□□□ -1.73
PBP4	YDL053C	MSS4	P38994	779 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	SHR5	P41912	237 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	ALY2	P47029	1046 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	YDR338C	Q05497	695 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	PEX19	Q07418	342 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	NTO1	Q12311	748 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	SWM1	Q12379	170 aa		4.26	□□□□□ -1.73
PBP4	YDL053C	PRP4	P20053	465 aa	Known RBP	4.25	□□□□□ -1.73
PBP4	YDL053C	SSY5	P47002	699 aa		4.25	□□□□□ -1.73
PBP4	YDL053C	ZDS1	P50111	915 aa	Known RBP	4.25	□□□□□ -1.73
PBP4	YDL053C	ASI2	P53895	289 aa		4.25	□□□□□ -1.73
PBP4	YDL053C	TRM2	P33753	639 aa		4.24	□□□□□ -1.73
PBP4	YDL053C	SAK1	P38990	1142 aa		4.24	□□□□□ -1.73
PBP4	YDL053C	VHR1	P40522	640 aa		4.24	□□□□□ -1.73
PBP4	YDL053C	CAF16	P43569	289 aa		4.24	□□□□□ -1.73
PBP4	YDL053C	BUL1	P48524	976 aa		4.24	□□□□□ -1.73
PBP4	YDL053C	CRR1	Q05790	422 aa		4.24	□□□□□ -1.73
PBP4	YDL053C	SRD1	P09007	221 aa		4.23	□□□□□ -1.73
PBP4	YDL053C	DEF1	P35732	738 aa	Known RBP	4.23	□□□□□ -1.73
PBP4	YDL053C	PZF1	P39933	429 aa		4.23	□□□□□ -1.73
PBP4	YDL053C	PFA3	P42836	336 aa		4.23	□□□□□ -1.73
PBP4	YDL053C	ZIP2	P53061	704 aa		4.23	□□□□□ -1.73
PBP4	YDL053C	ERG5	P54781	538 aa		4.23	□□□□□ -1.73
PBP4	YDL053C	SNP1	Q00916	300 aa	Predicted RBP	4.23	□□□□□ -1.73
PBP4	YDL053C	MUS81	Q04149	632 aa	Predicted RBP	4.23	□□□□□ -1.73
PBP4	YDL053C	TRM11	Q12463	433 aa		4.23	□□□□□ -1.73
PBP4	YDL053C	TUB2	P02557	457 aa	Known RBP	4.22	□□□□□ -1.73
PBP4	YDL053C	HRR25	P29295	494 aa	Known RBP	4.22	□□□□□ -1.73
PBP4	YDL053C	PMI40	P29952	429 aa	Known RBP	4.22	□□□□□ -1.73
PBP4	YDL053C	CTF13	P35203	478 aa		4.22	□□□□□ -1.73
PBP4	YDL053C	MNN1	P39106	762 aa		4.22	□□□□□ -1.73
PBP4	YDL053C	PKH1	Q03407	766 aa		4.22	□□□□□ -1.73
PBP4	YDL053C	GPR1	Q12361	961 aa		4.22	□□□□□ -1.73
PBP4	YDL053C	TRP4	P07285	380 aa	Predicted RBP	4.21	□□□□□ -1.74
PBP4	YDL053C	RAD18	P10862	487 aa		4.21	□□□□□ -1.74
PBP4	YDL053C	RPP1	P38786	293 aa		4.21	□□□□□ -1.74
PBP4	YDL053C	RPN10	P38886	268 aa	Known RBP	4.21	□□□□□ -1.74
PBP4	YDL053C	AIM21	P40563	679 aa		4.21	□□□□□ -1.74
PBP4	YDL053C	TFB2	Q02939	513 aa		4.21	□□□□□ -1.74
PBP4	YDL053C	ASM4	Q05166	528 aa		4.21	□□□□□ -1.74
PBP4	YDL053C	AIM39	Q08223	395 aa		4.21	□□□□□ -1.74
PBP4	YDL053C	YLR415C	O13578	112 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	MIH1	P23748	554 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	PCL2	P25693	308 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	EFT1	P32324	842 aa	Known RBP	4.2	□□□□□ -1.74
PBP4	YDL053C	HOG1	P32485	435 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	MTR3	P48240	250 aa	Predicted RBP	4.2	□□□□□ -1.74
PBP4	YDL053C	MSE1	P48525	536 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	MRPS35	P53292	345 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	SUN4	P53616	420 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	KIN4	Q01919	800 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	YLR001C	Q07895	862 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	NOP14	Q99207	810 aa	Known RBP	4.2	□□□□□ -1.74
PBP4	YDL053C	YLR149C	Q99296	730 aa		4.2	□□□□□ -1.74
PBP4	YDL053C	NGG1	P32494	702 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	FKH2	P41813	862 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	YFL052W	P43551	465 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	BNA2	P47125	453 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	NHX1	Q04121	633 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	GSF2	Q04697	403 aa	Known RBP	4.19	□□□□□ -1.74
PBP4	YDL053C	PUS9	Q12069	462 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	TRM13	Q12383	476 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	Q0142	Q9ZZW4	58 aa		4.19	□□□□□ -1.74
PBP4	YDL053C	RPL8A	P17076	256 aa	Known RBP	4.18	□□□□□ -1.74
PBP4	YDL053C	YEL1	P34225	687 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	YKR051W	P36142	418 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	SIC1	P38634	284 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	NPY1	P53164	384 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	YNL193W	P53870	558 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	NRG1	Q03125	231 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	URN1	Q06525	465 aa	Known RBP	4.18	□□□□□ -1.74
PBP4	YDL053C	YLR040C	Q07988	224 aa		4.18	□□□□□ -1.74
PBP4	YDL053C	HMG1	P12683	1054 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	SFL1	P20134	766 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	ERG4	P25340	473 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	KTR4	P38131	464 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	HSL7	P38274	827 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	PCM1	P38628	557 aa	Known RBP	4.17	□□□□□ -1.74
PBP4	YDL053C	UBC9	P50623	157 aa	Predicted RBP	4.17	□□□□□ -1.74
PBP4	YDL053C	AIM14	P53109	570 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	COG8	Q04632	607 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	ATG33	Q06485	197 aa		4.17	□□□□□ -1.74
PBP4	YDL053C	MET3	P08536	511 aa		4.16	□□□□□ -1.74
PBP4	YDL053C	SFP1	P32432	683 aa		4.16	□□□□□ -1.74
PBP4	YDL053C	DOT6	P40059	670 aa	Known RBP	4.16	□□□□□ -1.74
PBP4	YDL053C	ELO3	P40319	345 aa		4.16	□□□□□ -1.74
PBP4	YDL053C	MUP1	P50276	574 aa		4.16	□□□□□ -1.74
PBP4	YDL053C	DNM1	P54861	757 aa		4.16	□□□□□ -1.74
PBP4	YDL053C	UTP14	Q04500	899 aa	Known RBP	4.16	□□□□□ -1.74
PBP4	YDL053C	RPN7	Q06103	429 aa	Known RBP	4.16	□□□□□ -1.74
PBP4	YDL053C	SUL1	P38359	859 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 89.2 ms